FFCP PHASE1:Hg19::chr19:47287969..47287986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6510 | |EntrezGene=6510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10943 | |HGNC=10943 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC01,B4DR77 | |UniProt=E9PC01,B4DR77 | ||
|association_with_transcript=147bp_to_ENST00000434726,NM_001145145,uc010xyh.1_5end | |association_with_transcript=147bp_to_ENST00000434726,NM_001145145,uc010xyh.1_5end | ||
|cluster_id=chr19:47287969..47287986,- | |||
|description=CAGE_peak_5_at_SLC1A5_5end | |description=CAGE_peak_5_at_SLC1A5_5end | ||
|id=chr19:47287969..47287986,- | |id=chr19:47287969..47287986,- | ||
|ontology_enrichment_celltype=CL:0000548!2.30e-16!679;CL:0000004!2.30e-16!679;CL:0000255!2.30e-16!679;CL:0000012!6.21e-16!682;CL:0000055!2.40e-12!180;CL:0000057!2.95e-12!75;CL:0000003!5.79e-11!722;CL:0000063!2.25e-10!578;CL:0002371!6.49e-09!591;CL:0000144!2.04e-07!625 | |ontology_enrichment_celltype=CL:0000548!2.30e-16!679;CL:0000004!2.30e-16!679;CL:0000255!2.30e-16!679;CL:0000012!6.21e-16!682;CL:0000055!2.40e-12!180;CL:0000057!2.95e-12!75;CL:0000003!5.79e-11!722;CL:0000063!2.25e-10!578;CL:0002371!6.49e-09!591;CL:0000144!2.04e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002570;3.15e-09;8!CL:0002615;4.61e-09;3!CL:0002579;7.95e-09;3!CL:0002334;5.47e-08;12!CL:0000153;3.20e-07;9!CL:0000447;3.20e-07;9!CL:0002554;7.62e-07;2 | |ontology_enrichment_celltype_v019=CL:0002570;3.15e-09;8!CL:0002615;4.61e-09;3!CL:0002579;7.95e-09;3!CL:0002334;5.47e-08;12!CL:0000153;3.20e-07;9!CL:0000447;3.20e-07;9!CL:0002554;7.62e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.74e-09,8;CL:0002579,9.44e-09,3;CL:0002615,1.17e-08,3;CL:0000136,3.13e-08,15;CL:0002334,5.80e-08,12;CL:0000153,3.07e-07,9;CL:0000447,3.07e-07,9;CL:0000057,4.04e-07,76;CL:0002554,8.12e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.85e-07!106 | |ontology_enrichment_disease=DOID:305!2.85e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.29e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!1.29e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-18;9!UBERON:0000042;1.23e-18;9!UBERON:0003688;3.41e-16;6!UBERON:0002358;3.41e-16;6!UBERON:0003684;3.41e-16;6!UBERON:0001178;3.41e-16;6!UBERON:0001013;1.73e-09;14!UBERON:0000310;5.35e-07;10!UBERON:0005406;7.62e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-18;9!UBERON:0000042;1.23e-18;9!UBERON:0003688;3.41e-16;6!UBERON:0002358;3.41e-16;6!UBERON:0003684;3.41e-16;6!UBERON:0001178;3.41e-16;6!UBERON:0001013;1.73e-09;14!UBERON:0000310;5.35e-07;10!UBERON:0005406;7.62e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.01e-15,6;UBERON:0002358,1.01e-15,6;UBERON:0003684,1.01e-15,6;UBERON:0001178,1.01e-15,6;UBERON:0004457,2.18e-13,12;UBERON:0000042,2.18e-13,12;UBERON:0001013,1.72e-09,14;UBERON:0005406,5.60e-07,2;UBERON:0000310,5.68e-07,10 | |||
|phase1_expression=1.45342703416445,0.428201047781966,2.25527046553554,1.0007329835313,2.23480547213644,2.61701557230111,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,1.50401373190767,1.44846518960824,0,0,0,0,0,0,1.82147644146271,0.741568885568859,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,1.49091585508596,0,0.662045904066094,2.86836620748814,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,3.74914290934075,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0.723280468230358,1.18800285728205,0.989067717114227,2.73048408581408,2.15585442544872,0,0,0,0.438977620880838,0.30648779579902,1.35214253015937,0.226864366320042,0,0.85422955527427,0.635795703478686,1.80054657650641,1.13357782162283,0,1.30281799432113,0.168776332241266,0.292311015483596,0.252433774244115,0.552299391853796,0.646584227275248,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0.236613600079688,0.337169380156203,0,0.55146986366197,0.217879444092406,0.474541238222193,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0.462942225792648,1.62904152655162,0,0,0,0.117408694235822,0,0,0,2.37061319387782,2.57545848628462,0,0,0,0,0,0.141775097242386,0.447792613514241,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,10.7296933755565,0,1.86156681609409,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0.871533458600294,0,0,0,0,1.4377491329495,0,0,0.579125226670317,0,0.179060963239896,0.448340575974109,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,1.89885516589815,0.831883446123229,2.67643483195743,2.36553622550902,1.05427273493442,0.601892199455438,2.27407504055985,6.2083842775503,0.664225598535437,0.368738337083406,0,0.195801157462741,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,5.21026396419431,0.767309866440312,2.24528075546459,3.20347873139252,1.02341449813341,1.76939313257968,2.96836132889982,0,0.710246901252508,0.164254312027618,0,0,0,0,0.644566922551274,1.14814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.27470839445503,0.247528499761764,0,0,0,1.83674364755032,0.154048617114644,0.307007349452259,0,1.50388342815583,0.290033387828457,0.170453254832202,3.38321735457602,0.661139661443912,0.576570202095319,0,0.30347334256665,0.464845549297286,1.88887408098384,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0.42793898803392,1.59101623962968,0,0,0,0,0.404364963146632,0,0,0,0,0,1.9109987597118,1.1312434556297,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.491245205065606,0,0.354761064070598,1.68886108238131,4.61012850143863,0.75894634753143,0.699869440489966,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0.0711418433484141,0,0,0,3.38677732358213,0,0.280797178113459,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,1.55519793830904,0.179736702294654,2.68531762013414,0,0,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.871507708151921,0.975966209950223,0,0.227884111694002,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.978323094660449,0.485560759068186,0,0,0,0,1.65355761355942,0,0,0,0,0,0,0.138674673013139,0,0.489961987071888,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.584714536689484,0.0821154570532092,0,0.176512253383001,0,0.137041924646751,0,0,1.75996244461323,0,0,0.599428828746391,0.144090417154106,0.114536596165916,0,0.432164393964449,0.124252535565433,2.12124631155116,0,0,0.713987523454252,1.15580235960608,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0.78741985211799,0.169346664131569,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.985110248992068,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.74627401443437,1.168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| ||
|short_description=p5@SLC1A5 | |short_description=p5@SLC1A5 | ||
}} | }} |
Latest revision as of 21:55, 18 September 2015
Short description: | p5@SLC1A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC1A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000434726, NM_001145145, uc010xyh.1_5end |
EntrezGene: | SLC1A5 |
HGNC: | 10943 |
UniProt: | E9PC01B4DR77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.74e-09 | 8 |
omentum preadipocyte | 9.44e-09 | 3 |
adipocyte of omentum tissue | 1.17e-08 | 3 |
fat cell | 3.13e-08 | 15 |
preadipocyte | 5.80e-08 | 12 |
GAG secreting cell | 3.07e-07 | 9 |
carbohydrate secreting cell | 3.07e-07 | 9 |
fibroblast | 4.04e-07 | 76 |
fibroblast of lymphatic vessel | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.01e-15 | 6 |
peritoneum | 1.01e-15 | 6 |
abdominal cavity | 1.01e-15 | 6 |
visceral peritoneum | 1.01e-15 | 6 |
cavity lining | 2.18e-13 | 12 |
serous membrane | 2.18e-13 | 12 |
adipose tissue | 1.72e-09 | 14 |
perirenal fat | 5.60e-07 | 2 |
breast | 5.68e-07 | 10 |