FFCP PHASE1:Hg19::chr19:15751652..15751663,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4051 | |EntrezGene=4051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2646 | |HGNC=2646 | ||
|TSSclassifier=strong | |||
|UniProt=F5H469 | |UniProt=F5H469 | ||
|association_with_transcript=-31bp_to_ENST00000538865_5end | |association_with_transcript=-31bp_to_ENST00000538865_5end | ||
|cluster_id=chr19:15751652..15751663,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_5_at_CYP4F3_5end | |description=CAGE_peak_5_at_CYP4F3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.91e-23;8!CL:0000775;3.00e-23;3!CL:0000081;5.18e-17;11!CL:0000771;3.98e-16;2!CL:0000319;2.74e-08;1 | |ontology_enrichment_celltype_v019=CL:0000094;1.91e-23;8!CL:0000775;3.00e-23;3!CL:0000081;5.18e-17;11!CL:0000771;3.98e-16;2!CL:0000319;2.74e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.91e-23,8;CL:0000775,2.89e-23,3;CL:0000081,5.19e-17,11;CL:0000771,4.13e-16,2;CL:0000319,2.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.74e-08;1 | |ontology_enrichment_development_v019=UBERON:0009143;2.74e-08;1 | ||
|ontology_enrichment_disease=DOID:1749!2.49e-07!14;DOID:305!7.66e-07!106 | |ontology_enrichment_disease=DOID:1749!2.49e-07!14;DOID:305!7.66e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.47e-08;1!DOID:1357;1.47e-08;1!DOID:3030;2.74e-08;1!DOID:0050615;3.38e-07;16 | |ontology_enrichment_disease_v019=DOID:0050619;1.47e-08;1!DOID:1357;1.47e-08;1!DOID:3030;2.74e-08;1!DOID:0050615;3.38e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.71e-08,1;DOID:1357,1.71e-08,1;DOID:3030,2.84e-08,1;DOID:0050615,4.09e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0000178!4.91e-12!15;UBERON:0000179!4.91e-12!15;UBERON:0000463!4.91e-12!15 | |ontology_enrichment_uberon=UBERON:0007023!2.94e-19!115;UBERON:0000178!4.91e-12!15;UBERON:0000179!4.91e-12!15;UBERON:0000463!4.91e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.63e-30;15!UBERON:0000179;6.63e-30;15!UBERON:0000463;6.63e-30;15!UBERON:0002390;3.87e-12;32!UBERON:0004913;1.18e-08;1!UBERON:0003703;1.18e-08;1!UBERON:0001174;1.18e-08;1!UBERON:0004914;1.18e-08;1!UBERON:0001764;1.47e-08;1!UBERON:0001825;1.47e-08;1!UBERON:0005795;2.74e-08;1!UBERON:0002394;4.62e-08;4!UBERON:0003928;4.62e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.63e-30;15!UBERON:0000179;6.63e-30;15!UBERON:0000463;6.63e-30;15!UBERON:0002390;3.87e-12;32!UBERON:0004913;1.18e-08;1!UBERON:0003703;1.18e-08;1!UBERON:0001174;1.18e-08;1!UBERON:0004914;1.18e-08;1!UBERON:0001764;1.47e-08;1!UBERON:0001825;1.47e-08;1!UBERON:0005795;2.74e-08;1!UBERON:0002394;4.62e-08;4!UBERON:0003928;4.62e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.81e-30,15;UBERON:0000179,5.81e-30,15;UBERON:0000463,5.81e-30,15;UBERON:0004913,1.18e-08,1;UBERON:0003703,1.18e-08,1;UBERON:0001174,1.18e-08,1;UBERON:0004914,1.18e-08,1;UBERON:0001764,1.71e-08,1;UBERON:0001825,1.71e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.697287110717054,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,2.42159801053347,0,0.316462387440884,0,0,0,0.22465726229299,0.750884464207532,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9801404789436,17.9496875522415,26.1081773464702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0.443430153536676,0,6.08937131078603,7.64637207142375,2.84823593587081,1.66762242820452,2.46817363851717,7.78167973431261,4.86028293514303,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,1.71752672377882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,1.79021174675609,0,0,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0.609414446062818,0,0,0.19351266257817,0.292357268344742,0.164230914106418,1.84279131327997,0,0,0,0,0.0633107959558787,0.586654148204409,0.320635281006135,0.640358984218058,0,0.144090417154106,0,0,0,0,0.235694034616795,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.134366944973453,0,0,0.393915911536118,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,2.32140586367385,0.0607495566580247,0,0.551639951094387,0.157363764404994,0,1.07572403599707,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0.13223260174269,1.36869470307464,1.40963004463334,0.533937062838473,0,0,0,0,0,0,0,0,0,0,2.19875734750328,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,1.47463745252232,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.322951291263702,0,0.588886311006154,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,3.10497781055795,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0.472775363535873,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0.891139200981258,0,0,0.281951753939561,0.644578879735772,0,0.357107877211315,0.705789743431384,0.240724100067505,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0.426467963801962,0,0,0.248298857183432,0,0.0636471582781649,0,1.08858373948481,0.342233301085281,0.942928742204225,0.286888821570705,0,0,0,0,0.269475606319761,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.697287110717054,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,2.42159801053347,0,0.316462387440884,0,0,0,0.22465726229299,0.750884464207532,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9801404789436,17.9496875522415,26.1081773464702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0.443430153536676,0,6.08937131078603,7.64637207142375,2.84823593587081,1.66762242820452,2.46817363851717,7.78167973431261,4.86028293514303,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,1.71752672377882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,1.79021174675609,0,0,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0.609414446062818,0,0,0.19351266257817,0.292357268344742,0.164230914106418,1.84279131327997,0,0,0,0,0.0633107959558787,0.586654148204409,0.320635281006135,0.640358984218058,0,0.144090417154106,0,0,0,0,0.235694034616795,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.134366944973453,0,0,0.393915911536118,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,2.32140586367385,0.0607495566580247,0,0.551639951094387,0.157363764404994,0,1.07572403599707,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0.13223260174269,1.36869470307464,1.40963004463334,0.533937062838473,0,0,0,0,0,0,0,0,0,0,2.19875734750328,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,1.47463745252232,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.322951291263702,0,0.588886311006154,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,3.10497781055795,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0.472775363535873,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0.891139200981258,0,0,0.281951753939561,0.644578879735772,0,0.357107877211315,0.705789743431384,0.240724100067505,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0.426467963801962,0,0,0.248298857183432,0,0.0636471582781649,0,1.08858373948481,0.342233301085281,0.942928742204225,0.286888821570705,0,0,0,0,0.269475606319761,0,0,1.22068853494722,0,0,0 | ||
|short_description=p5@CYP4F3 | |short_description=p5@CYP4F3 | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p5@CYP4F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYP4F3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -31bp_to_ENST00000538865_5end |
EntrezGene: | CYP4F3 |
HGNC: | 2646 |
UniProt: | F5H469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.91e-23 | 8 |
neutrophil | 2.89e-23 | 3 |
blood cell | 5.19e-17 | 11 |
eosinophil | 4.13e-16 | 2 |
mucus secreting cell | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.81e-30 | 15 |
haemolymphatic fluid | 5.81e-30 | 15 |
organism substance | 5.81e-30 | 15 |
hepatopancreatic ampulla | 1.18e-08 | 1 |
extrahepatic bile duct | 1.18e-08 | 1 |
common bile duct | 1.18e-08 | 1 |
duodenal papilla | 1.18e-08 | 1 |
maxillary sinus | 1.71e-08 | 1 |
paranasal sinus | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.71e-08 | 1 |
maxillary sinus cancer | 1.71e-08 | 1 |
mucinous adenocarcinoma | 2.84e-08 | 1 |
respiratory system cancer | 4.09e-07 | 16 |