FFCP PHASE1:Hg19::chr1:50569575..50569586,+: Difference between revisions
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|id=chr1:50569575..50569586,+
|short_description=p11@ELAVL4
|description=CAGE_peak_11_at_ELAVL4_5end
|association_with_transcript=0bp_to_ENST00000371827,NM_00114477...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1996 | |EntrezGene=1996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3315 | |HGNC=3315 | ||
|TSSclassifier=strong | |||
|UniProt=P26378 | |UniProt=P26378 | ||
|association_with_transcript=0bp_to_ENST00000371827,NM_001144776,uc001crz.3_5end | |||
|cluster_id=chr1:50569575..50569586,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_11_at_ELAVL4_5end | |||
|id=chr1:50569575..50569586,+ | |||
|ontology_enrichment_celltype=CL:0000242!9.40e-14!2;CL:0000133!1.82e-10!59;CL:0000333!9.54e-10!41;CL:0000221!8.88e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000221;6.72e-10;72!CL:0000133;1.64e-07;59 | |||
|ontology_enrichment_disease=DOID:169!4.90e-38!6;DOID:171!3.52e-23!10;DOID:3095!6.05e-11!22;DOID:2994!6.05e-11!22;DOID:5409!1.69e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-98,6;DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.89e-45!5;UBERON:0002410!1.89e-45!5;UBERON:0000988!2.09e-33!3;UBERON:0000010!1.17e-25!8;UBERON:0002148!1.37e-13!2;UBERON:0009662!1.37e-13!2;UBERON:0002298!3.20e-13!8;UBERON:0002680!7.27e-12!9;UBERON:0001895!7.27e-12!9;UBERON:0010092!7.27e-12!9;UBERON:0006331!1.67e-09!3;UBERON:0000073!2.68e-09!94;UBERON:0001016!2.68e-09!94;UBERON:0004733!3.85e-09!12;UBERON:0002028!3.85e-09!12;UBERON:0007277!3.85e-09!12;UBERON:0004732!1.65e-08!13;UBERON:0003076!1.70e-07!15;UBERON:0003057!1.70e-07!15;UBERON:0004121!4.81e-07!169;UBERON:0000924!7.01e-07!173;UBERON:0006601!7.01e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.76e-118,5;UBERON:0002410,7.76e-118,5;UBERON:0000010,3.75e-66,8;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p11@ELAVL4 | |||
}} | }} |
Latest revision as of 10:45, 18 September 2015
Short description: | p11@ELAVL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ELAVL4_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000371827, NM_001144776, uc001crz.3_5end |
EntrezGene: | ELAVL4 |
HGNC: | 3315 |
UniProt: | P26378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.76e-118 | 5 |
autonomic nervous system | 7.76e-118 | 5 |
peripheral nervous system | 3.75e-66 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-98 | 6 |
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |