FFCP PHASE1:Hg19::chr3:185649710..185649744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6434 | |EntrezGene=6434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10781 | |HGNC=10781 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-304bp_to_ENST00000477939_5end | |association_with_transcript=-304bp_to_ENST00000477939_5end | ||
|cluster_id=chr3:185649710..185649744,- | |||
|description=CAGE_peak_7_at_TRA2B_5end | |description=CAGE_peak_7_at_TRA2B_5end | ||
|id=chr3:185649710..185649744,- | |id=chr3:185649710..185649744,- | ||
|ontology_enrichment_celltype=CL:0000037!6.69e-10!172;CL:0000566!6.69e-10!172;CL:0000988!5.13e-09!182;CL:0000738!7.84e-09!140;CL:0002032!2.02e-08!165;CL:0000837!2.02e-08!165;CL:0002087!8.35e-08!119;CL:0002031!9.06e-07!124 | |ontology_enrichment_celltype=CL:0000037!6.69e-10!172;CL:0000566!6.69e-10!172;CL:0000988!5.13e-09!182;CL:0000738!7.84e-09!140;CL:0002032!2.02e-08!165;CL:0000837!2.02e-08!165;CL:0002087!8.35e-08!119;CL:0002031!9.06e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.84e-16;3!CL:0000084;6.22e-12;25!CL:0000542;1.37e-11;53!CL:0000791;7.28e-10;18!CL:0000789;7.28e-10;18!CL:0002419;7.28e-10;18!CL:0000624;2.27e-08;6 | |ontology_enrichment_celltype_v019=CL:0000623;4.84e-16;3!CL:0000084;6.22e-12;25!CL:0000542;1.37e-11;53!CL:0000791;7.28e-10;18!CL:0000789;7.28e-10;18!CL:0002419;7.28e-10;18!CL:0000624;2.27e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.20e-19,52;CL:0000542,1.37e-18,53;CL:0000051,1.37e-18,53;CL:0002087,2.30e-16,115;CL:0000623,2.78e-16,3;CL:0000825,2.78e-16,3;CL:0002031,6.65e-14,120;CL:0000738,4.22e-13,136;CL:0000037,4.44e-12,168;CL:0000084,5.37e-12,25;CL:0000827,5.37e-12,25;CL:0002032,1.45e-11,161;CL:0000837,1.45e-11,161;CL:0000988,3.35e-11,177;CL:0000791,5.75e-10,18;CL:0000789,5.75e-10,18;CL:0002420,5.75e-10,18;CL:0002419,5.75e-10,18;CL:0000790,5.75e-10,18;CL:0000624,1.89e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.37e-11;53!CL:0000790;7.28e-10;18 | |ontology_enrichment_development_v019=CL:0000051;1.37e-11;53!CL:0000790;7.28e-10;18 | ||
|ontology_enrichment_disease=DOID:162!2.84e-12!235;DOID:14566!1.59e-11!239;DOID:0050687!1.45e-08!143;DOID:305!7.92e-07!106 | |ontology_enrichment_disease=DOID:162!2.84e-12!235;DOID:14566!1.59e-11!239;DOID:0050687!1.45e-08!143;DOID:305!7.92e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.753255837568817,0.0764134057479513,0.246301768349837,0.314843125254717,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.542270404062111,0.568676929949686,0.587200878669695,3.32397245119126,0.401088894940283,1.08505435357926,0.895661896959697,0,0,0.290796477559129,0.755751887377619,0,0.697287110717054,0.822335776043652,0.619412741790207,0.575384784644301,0.512321413058201,0,0,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0.870627715885752,0,0,1.00499466102697,2.60741459210101,0,0.605399502633369,0,1.26584954976354,0.211255286311942,0.212604299965044,0,0.44931452458598,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0.853460445133014,0,0,0,0,3.41527781465669,1.17447437874188,3.44045905312706,0,0,0.526768169550154,2.16380747125216,1.57204305099666,2.46721798799411,0.167186495390678,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.444859689486181,0.535081656179426,0,0.113309342697566,0,1.03088233644789,0.506039384039006,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.61285394579786,2.40696176205157,2.17236605824198,2.43806866313962,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.843881661206331,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.864719720501769,0.37872730027914,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,1.18218456121156,4.09692392233083,1.66845947163673,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,1.24060815673732,0.862856803274467,0.320182673410333,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0.0821271560138091,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.03041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0.735120647943095,0.371606350251437,0.577076851905779,0.569134746787313,0,0.399158742865633,0.5745161103971,0.211673582723883,0,0.561594356226918,0,0.313359791546046,2.50634477090067,0,0.802940375518498,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0,0.36408156524854,0.557216921387392,0,0,0,0.307160702099232,0.994147647766298,0.844016498463076,0.333926115068718,0.329607748453519,1.26675244876796,0.19924798825107,0,0.251932747854276,0.409074730008619,1.10776324914963,0,0.179736702294654,0.716084698702437,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.227586896570999,0.508507300585533,0.945550727071745,1.03423011972439,0,0.173624994933292,0,0.482385754501632,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0.41827123283581,0.153900517007594,0.113942055847001,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,1.06606955203727,1.02193298195737,0,0.166211681900156,0.225595660617181,0,0.503464760927528,0,0.158936578980379,0,0,0.424059214301822,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.370691816839509,0.626531697032732,0.067401132980677,0,0.468528891450678,0.729819156862664,0,0.728341138602278,0,0,0,0.126373159256976,0.150323419414493,0,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0.569219092059585,0,0.173559738335131,0.881931576729399,0.261177619741208,0.17472666824203,1.0319161948297,0.580537987734511,0.14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| ||
|short_description=p7@TRA2B | |short_description=p7@TRA2B | ||
}} | }} |
Latest revision as of 04:12, 17 September 2015
Short description: | p7@TRA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRA2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -304bp_to_ENST00000477939_5end |
EntrezGene: | TRA2B |
HGNC: | 10781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.20e-19 | 52 |
lymphocyte | 1.37e-18 | 53 |
common lymphoid progenitor | 1.37e-18 | 53 |
nongranular leukocyte | 2.30e-16 | 115 |
natural killer cell | 2.78e-16 | 3 |
pro-NK cell | 2.78e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 6.65e-14 | 120 |
leukocyte | 4.22e-13 | 136 |
hematopoietic stem cell | 4.44e-12 | 168 |
T cell | 5.37e-12 | 25 |
pro-T cell | 5.37e-12 | 25 |
hematopoietic oligopotent progenitor cell | 1.45e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-11 | 161 |
hematopoietic cell | 3.35e-11 | 177 |
mature alpha-beta T cell | 5.75e-10 | 18 |
alpha-beta T cell | 5.75e-10 | 18 |
immature T cell | 5.75e-10 | 18 |
mature T cell | 5.75e-10 | 18 |
immature alpha-beta T cell | 5.75e-10 | 18 |
CD4-positive, alpha-beta T cell | 1.89e-08 | 6 |