FFCP PHASE1:Hg19::chr12:46781329..46781343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100288798 | |EntrezGene=100288798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_BC014370_5end | |association_with_transcript=-184bp_to_BC014370_5end | ||
|cluster_id=chr12:46781329..46781343,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_1_at_LOC100288798_5end | |description=CAGE_peak_1_at_LOC100288798_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000680!3.34e-13!57;CL:0000056!3.34e-13!57;CL:0000355!3.34e-13!57;CL:0000057!7.62e-13!75;CL:0000187!2.38e-11!54;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000183!1.97e-09!59;CL:0000359!2.12e-09!32;CL:0000393!4.29e-09!60;CL:0000211!4.29e-09!60;CL:0000499!6.66e-09!27;CL:0000327!8.12e-08!14;CL:0002334!6.06e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000680!3.34e-13!57;CL:0000056!3.34e-13!57;CL:0000355!3.34e-13!57;CL:0000057!7.62e-13!75;CL:0000187!2.38e-11!54;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000183!1.97e-09!59;CL:0000359!2.12e-09!32;CL:0000393!4.29e-09!60;CL:0000211!4.29e-09!60;CL:0000499!6.66e-09!27;CL:0000327!8.12e-08!14;CL:0002334!6.06e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0002334;2.21e-09;12!CL:0000153;5.53e-09;9!CL:0000447;5.53e-09;9!CL:0002615;7.04e-09;3!CL:0002579;1.63e-08;3!CL:0002580;9.57e-08;3!CL:0000499;1.28e-07;28!CL:0000515;1.81e-07;3!CL:0000135;3.26e-07;3!CL:0000388;3.26e-07;3!CL:0000136;6.21e-07;13!CL:0000197;7.41e-07;6!CL:0000098;7.41e-07;6!CL:0002167;7.41e-07;6!CL:0000327;8.28e-07;15 | |ontology_enrichment_celltype_v019=CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0002334;2.21e-09;12!CL:0000153;5.53e-09;9!CL:0000447;5.53e-09;9!CL:0002615;7.04e-09;3!CL:0002579;1.63e-08;3!CL:0002580;9.57e-08;3!CL:0000499;1.28e-07;28!CL:0000515;1.81e-07;3!CL:0000135;3.26e-07;3!CL:0000388;3.26e-07;3!CL:0000136;6.21e-07;13!CL:0000197;7.41e-07;6!CL:0000098;7.41e-07;6!CL:0002167;7.41e-07;6!CL:0000327;8.28e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.78e-10,4;CL:0002547,1.78e-10,4;CL:0000136,5.02e-10,15;CL:0002334,2.18e-09,12;CL:0000057,4.37e-09,76;CL:0000153,6.02e-09,9;CL:0000447,6.02e-09,9;CL:0002615,7.52e-09,3;CL:0002579,1.37e-08,3;CL:0002580,1.09e-07,3;CL:0000499,1.31e-07,28;CL:0000135,3.58e-07,3;CL:0000388,3.58e-07,3;CL:0000197,6.56e-07,6;CL:0000098,6.56e-07,6;CL:0002167,6.56e-07,6;CL:0000327,8.03e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.07e-13!61;UBERON:0002036!1.07e-13!61;UBERON:0003082!1.07e-13!61;UBERON:0000914!2.40e-13!83;UBERON:0002329!2.40e-13!83;UBERON:0003077!2.40e-13!83;UBERON:0003059!2.40e-13!83;UBERON:0007282!2.40e-13!83;UBERON:0009618!2.40e-13!83;UBERON:0007285!2.40e-13!83;UBERON:0002385!7.97e-13!63;UBERON:0001015!7.97e-13!63;UBERON:0000383!7.97e-13!63;UBERON:0004290!1.14e-11!70;UBERON:0000486!2.64e-11!82;UBERON:0004573!9.96e-10!33;UBERON:0004571!9.96e-10!33;UBERON:0001637!2.71e-09!42;UBERON:0003509!2.71e-09!42;UBERON:0004572!2.71e-09!42;UBERON:0004457!8.47e-09!12;UBERON:0000042!8.47e-09!12;UBERON:0000475!3.87e-08!365;UBERON:0002100!5.67e-08!216;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0000310!1.69e-07!10 | |ontology_enrichment_uberon=UBERON:0001134!1.07e-13!61;UBERON:0002036!1.07e-13!61;UBERON:0003082!1.07e-13!61;UBERON:0000914!2.40e-13!83;UBERON:0002329!2.40e-13!83;UBERON:0003077!2.40e-13!83;UBERON:0003059!2.40e-13!83;UBERON:0007282!2.40e-13!83;UBERON:0009618!2.40e-13!83;UBERON:0007285!2.40e-13!83;UBERON:0002385!7.97e-13!63;UBERON:0001015!7.97e-13!63;UBERON:0000383!7.97e-13!63;UBERON:0004290!1.14e-11!70;UBERON:0000486!2.64e-11!82;UBERON:0004573!9.96e-10!33;UBERON:0004571!9.96e-10!33;UBERON:0001637!2.71e-09!42;UBERON:0003509!2.71e-09!42;UBERON:0004572!2.71e-09!42;UBERON:0004457!8.47e-09!12;UBERON:0000042!8.47e-09!12;UBERON:0000475!3.87e-08!365;UBERON:0002100!5.67e-08!216;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0000310!1.69e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.31e-17;9!UBERON:0000042;4.31e-17;9!UBERON:0003688;1.06e-15;6!UBERON:0002358;1.06e-15;6!UBERON:0003684;1.06e-15;6!UBERON:0001178;1.06e-15;6!UBERON:0000310;4.66e-11;10!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0001443;6.03e-10;11!UBERON:0007846;3.26e-07;3!UBERON:0000043;3.26e-07;3!UBERON:0007845;3.26e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.31e-17;9!UBERON:0000042;4.31e-17;9!UBERON:0003688;1.06e-15;6!UBERON:0002358;1.06e-15;6!UBERON:0003684;1.06e-15;6!UBERON:0001178;1.06e-15;6!UBERON:0000310;4.66e-11;10!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0001443;6.03e-10;11!UBERON:0007846;3.26e-07;3!UBERON:0000043;3.26e-07;3!UBERON:0007845;3.26e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.55e-16,6;UBERON:0002358,9.55e-16,6;UBERON:0003684,9.55e-16,6;UBERON:0001178,9.55e-16,6;UBERON:0004457,1.70e-12,12;UBERON:0000042,1.70e-12,12;UBERON:0000310,4.22e-11,10;UBERON:0000415,1.78e-10,4;UBERON:0007240,1.78e-10,4;UBERON:0005742,1.78e-10,4;UBERON:0005734,1.78e-10,4;UBERON:0004664,1.78e-10,4;UBERON:0004663,1.78e-10,4;UBERON:0001443,5.52e-10,11;UBERON:0004573,9.13e-08,33;UBERON:0004571,9.13e-08,33;UBERON:0007846,3.58e-07,3;UBERON:0000043,3.58e-07,3;UBERON:0007845,3.58e-07,3 | |||
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| ||
|short_description=p1@LOC100288798 | |short_description=p1@LOC100288798 | ||
}} | }} |
Latest revision as of 11:21, 18 September 2015
Short description: | p1@LOC100288798 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100288798_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -184bp_to_BC014370_5end |
EntrezGene: | LOC100288798 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.78e-10 | 4 |
fibroblast of the aortic adventitia | 1.78e-10 | 4 |
fat cell | 5.02e-10 | 15 |
preadipocyte | 2.18e-09 | 12 |
fibroblast | 4.37e-09 | 76 |
GAG secreting cell | 6.02e-09 | 9 |
carbohydrate secreting cell | 6.02e-09 | 9 |
adipocyte of omentum tissue | 7.52e-09 | 3 |
omentum preadipocyte | 1.37e-08 | 3 |
preadipocyte of the breast | 1.09e-07 | 3 |
stromal cell | 1.31e-07 | 28 |
fibrocyte | 3.58e-07 | 3 |
tendon cell | 3.58e-07 | 3 |
receptor cell | 6.56e-07 | 6 |
sensory epithelial cell | 6.56e-07 | 6 |
olfactory epithelial cell | 6.56e-07 | 6 |
extracellular matrix secreting cell | 8.03e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.55e-16 | 6 |
peritoneum | 9.55e-16 | 6 |
abdominal cavity | 9.55e-16 | 6 |
visceral peritoneum | 9.55e-16 | 6 |
cavity lining | 1.70e-12 | 12 |
serous membrane | 1.70e-12 | 12 |
breast | 4.22e-11 | 10 |
artery wall | 1.78e-10 | 4 |
tunica adventitia of artery | 1.78e-10 | 4 |
adventitia | 1.78e-10 | 4 |
tunica adventitia of blood vessel | 1.78e-10 | 4 |
aorta tunica adventitia | 1.78e-10 | 4 |
aorta wall | 1.78e-10 | 4 |
chest | 5.52e-10 | 11 |
systemic artery | 9.13e-08 | 33 |
systemic arterial system | 9.13e-08 | 33 |
dense regular connective tissue | 3.58e-07 | 3 |
tendon | 3.58e-07 | 3 |
regular connective tissue | 3.58e-07 | 3 |