FFCP PHASE1:Hg19::chr16:70303221..70303225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:70303221..70303225,- | |||
|description=CAGE_peak_at_chr16:70303221..70303225,- | |description=CAGE_peak_at_chr16:70303221..70303225,- | ||
|id=chr16:70303221..70303225,- | |id=chr16:70303221..70303225,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;1.40e-14;1!CL:0000557;1.40e-14;1!CL:0002591;1.40e-14;1 | |ontology_enrichment_celltype_v019=CL:0002032;1.40e-14;1!CL:0000557;1.40e-14;1!CL:0002591;1.40e-14;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.41e-14,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.83e-09!235;DOID:14566!9.35e-09!239 | |ontology_enrichment_disease=DOID:162!5.83e-09!235;DOID:14566!9.35e-09!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.96e-08!69;UBERON:0006238!2.96e-08!69;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0005743!1.19e-07!86;UBERON:0001017!1.65e-07!82 | |ontology_enrichment_uberon=UBERON:0000955!2.96e-08!69;UBERON:0006238!2.96e-08!69;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0005743!1.19e-07!86;UBERON:0001017!1.65e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.40e-14;1!UBERON:0009661;1.40e-14;1!UBERON:0002950;1.40e-14;1!UBERON:0001891;1.40e-14;1!UBERON:0000078;6.14e-08;2!UBERON:0002012;6.14e-08;2!UBERON:0008886;6.14e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002038;1.40e-14;1!UBERON:0009661;1.40e-14;1!UBERON:0002950;1.40e-14;1!UBERON:0001891;1.40e-14;1!UBERON:0000078;6.14e-08;2!UBERON:0002012;6.14e-08;2!UBERON:0008886;6.14e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.11e-14,1;UBERON:0009661,2.11e-14,1;UBERON:0002950,2.11e-14,1;UBERON:0001891,2.11e-14,1;UBERON:0009616,2.11e-14,1;UBERON:0010286,2.11e-14,1;UBERON:0000078,8.04e-08,2;UBERON:0007497,8.04e-08,2;UBERON:0003643,8.04e-08,2;UBERON:0003504,8.04e-08,2;UBERON:0003469,8.04e-08,2;UBERON:0003496,8.04e-08,2;UBERON:0002012,8.04e-08,2;UBERON:0008886,8.04e-08,2;UBERON:0007303,8.04e-08,2;UBERON:0002061,8.04e-08,2;UBERON:0005432,8.04e-08,2;UBERON:0004363,8.04e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0.515281080091258,0,0.675105328965065,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,1.07423381301644,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.267096106940212,0,0,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0.605399121573143,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,1.05562704063997,0.597743964753209,0,0,0.102268682502155,0,0.311039587661807,0,0.895105873378046,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0,0,0.520855522170466,0,0.724999575434793,0.455173793141999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0,0,0.139423744278603,0.230850775511391,0,0,0.359030577639089,1.62971057883012,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0.729819156862664,0.19566461893209,0.242780379534093,0,2.41981432097328,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0.529536760149002,0.225980740780532,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.305994652908965,1.44475294950759,0,0.273810757783986,1.27746588066972,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,0,0.236349546921671,0,0.0674035438541849,0,0.254019996197353,0,0.544813624446302,0.321506296930038,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0.104909176269996,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0.625954653532499,0,0.443716206147409,0.0620964029413835,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.337884881306145,0,0.345430341731199,0,0.276516872303462,0,0.132864840313363,0,0,0.491545817507439,0.422624246717254,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.314531883711793,0.109209638192014,0.169732529954025,0,0.495743057036009,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.478901577171454,0,1.26035848110859,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.795664888465099,0,0.20170506870352,1.56302802246618,0.523813388962845,0.163771917510097,0,0,0,0.206686796501184,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.790068058663633,0.348724276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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0.515281080091258,0,0.675105328965065,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,1.07423381301644,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.267096106940212,0,0,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0.605399121573143,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,1.05562704063997,0.597743964753209,0,0,0.102268682502155,0,0.311039587661807,0,0.895105873378046,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0,0,0.520855522170466,0,0.724999575434793,0.455173793141999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0,0,0.139423744278603,0.230850775511391,0,0,0.359030577639089,1.62971057883012,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0.729819156862664,0.19566461893209,0.242780379534093,0,2.41981432097328,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0.529536760149002,0.225980740780532,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.305994652908965,1.44475294950759,0,0.273810757783986,1.27746588066972,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,0,0.236349546921671,0,0.0674035438541849,0,0.254019996197353,0,0.544813624446302,0.321506296930038,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0.104909176269996,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0.625954653532499,0,0.443716206147409,0.0620964029413835,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.337884881306145,0,0.345430341731199,0,0.276516872303462,0,0.132864840313363,0,0,0.491545817507439,0.422624246717254,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.314531883711793,0.109209638192014,0.169732529954025,0,0.495743057036009,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.478901577171454,0,1.26035848110859,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.795664888465099,0,0.20170506870352,1.56302802246618,0.523813388962845,0.163771917510097,0,0,0,0.206686796501184,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.790068058663633,0.348724276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| ||
|short_description=p@chr16:70303221..70303225,- | |short_description=p@chr16:70303221..70303225,- | ||
}} | }} |
Latest revision as of 11:56, 25 July 2015
Short description: | p@chr16:70303221..70303225, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:70303221..70303225, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.41e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.11e-14 | 1 |
midbrain nucleus | 2.11e-14 | 1 |
regional part of midbrain | 2.11e-14 | 1 |
midbrain | 2.11e-14 | 1 |
presumptive midbrain | 2.11e-14 | 1 |
midbrain neural tube | 2.11e-14 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.04e-08 | 2 |
developing epithelial placode | 8.04e-08 | 2 |
respiratory system arterial blood vessel | 8.04e-08 | 2 |
respiratory system blood vessel | 8.04e-08 | 2 |
respiratory system artery | 8.04e-08 | 2 |
head blood vessel | 8.04e-08 | 2 |
pulmonary artery | 8.04e-08 | 2 |
pulmonary vascular system | 8.04e-08 | 2 |
pharyngeal vasculature | 8.04e-08 | 2 |
truncus arteriosus | 8.04e-08 | 2 |
aortic sac | 8.04e-08 | 2 |
pharyngeal arch artery | 8.04e-08 | 2 |