FFCP PHASE1:Hg19::chr3:69986115..69986119,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=135bp_to_ENST00000461014_5end | |association_with_transcript=135bp_to_ENST00000461014_5end | ||
|cluster_id=chr3:69986115..69986119,+ | |||
|coexpression_cluster_id=C1318 | |coexpression_cluster_id=C1318 | ||
|description=CAGE_peak_12_at_MITF_5end | |description=CAGE_peak_12_at_MITF_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.73e-11!5;CL:0000457!1.73e-11!5;CL:0002191!1.73e-11!5;CL:0000097!1.73e-11!5;CL:0000831!1.73e-11!5;CL:0002028!1.73e-11!5;CL:0000148!3.46e-09!10;CL:0000541!3.46e-09!10;CL:0000710!6.50e-07!20 | |ontology_enrichment_celltype=CL:0002274!1.73e-11!5;CL:0000457!1.73e-11!5;CL:0002191!1.73e-11!5;CL:0000097!1.73e-11!5;CL:0000831!1.73e-11!5;CL:0002028!1.73e-11!5;CL:0000148!3.46e-09!10;CL:0000541!3.46e-09!10;CL:0000710!6.50e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.03e-88;10!CL:0000147;3.50e-63;14!CL:0000710;2.31e-44;20!CL:0002567;5.99e-34;3!CL:0000075;5.86e-33;27!CL:0002566;2.78e-26;1!CL:0002077;1.47e-24;34!CL:0000149;1.92e-07;4 | |ontology_enrichment_celltype_v019=CL:0000148;3.03e-88;10!CL:0000147;3.50e-63;14!CL:0000710;2.31e-44;20!CL:0002567;5.99e-34;3!CL:0000075;5.86e-33;27!CL:0002566;2.78e-26;1!CL:0002077;1.47e-24;34!CL:0000149;1.92e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.61e-88,10;CL:0000541,2.61e-88,10;CL:0000147,3.14e-63,14;CL:0000710,2.14e-44,20;CL:0002567,6.51e-34,3;CL:0000075,5.54e-33,27;CL:0002566,2.78e-26,1;CL:0002077,2.94e-26,34;CL:0000333,8.12e-21,41;CL:0000133,9.89e-15,59;CL:0000221,3.63e-12,72;CL:0000149,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.01e-09;3!CL:0000133;3.21e-08;59!CL:0000221;6.00e-07;72 | |ontology_enrichment_development_v019=UBERON:0003056;1.01e-09;3!CL:0000133;3.21e-08;59!CL:0000221;6.00e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.720599767084807,0.12624243342638,4.57184838903617,3.4378958300245,2.34434894420094,0,1.7480673759565,1.50171528921959,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,6.7187951526057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.720599767084807,0.12624243342638,4.57184838903617,3.4378958300245,2.34434894420094,0,1.7480673759565,1.50171528921959,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,6.7187951526057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p12@MITF | |short_description=p12@MITF | ||
}} | }} |
Latest revision as of 12:25, 19 September 2015
Short description: | p12@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MITF_5end |
Coexpression cluster: | C1318_retina_Melanocyte_globus_caudate_eye_melanoma_nucleus |
Association with transcript: | 135bp_to_ENST00000461014_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.61e-88 | 10 |
melanoblast | 2.61e-88 | 10 |
pigment cell | 3.14e-63 | 14 |
neurecto-epithelial cell | 2.14e-44 | 20 |
light melanocyte | 6.51e-34 | 3 |
columnar/cuboidal epithelial cell | 5.54e-33 | 27 |
dark melanocyte | 2.78e-26 | 1 |
ecto-epithelial cell | 2.94e-26 | 34 |
migratory neural crest cell | 8.12e-21 | 41 |
neurectodermal cell | 9.89e-15 | 59 |
ectodermal cell | 3.63e-12 | 72 |
visual pigment cell | 1.92e-07 | 4 |