FFCP PHASE1:Hg19::chr10:119001485..119001496,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000425264_5end | |association_with_transcript=-51bp_to_ENST00000425264_5end | ||
|cluster_id=chr10:119001485..119001496,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_ENST00000425264_5end | |description=CAGE_peak_3_at_ENST00000425264_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.07e-20!5;CL:0000457!1.07e-20!5;CL:0002191!1.07e-20!5;CL:0000097!1.07e-20!5;CL:0000831!1.07e-20!5;CL:0002028!1.07e-20!5;CL:0000842!5.97e-12!3;CL:0000163!2.40e-11!9;CL:0000763!4.06e-10!112;CL:0000049!4.06e-10!112;CL:0000037!8.39e-10!172;CL:0000566!8.39e-10!172;CL:0000224!4.47e-09!4;CL:0000988!6.28e-09!182;CL:0002032!6.73e-07!165;CL:0000837!6.73e-07!165 | |ontology_enrichment_celltype=CL:0002274!1.07e-20!5;CL:0000457!1.07e-20!5;CL:0002191!1.07e-20!5;CL:0000097!1.07e-20!5;CL:0000831!1.07e-20!5;CL:0002028!1.07e-20!5;CL:0000842!5.97e-12!3;CL:0000163!2.40e-11!9;CL:0000763!4.06e-10!112;CL:0000049!4.06e-10!112;CL:0000037!8.39e-10!172;CL:0000566!8.39e-10!172;CL:0000224!4.47e-09!4;CL:0000988!6.28e-09!182;CL:0002032!6.73e-07!165;CL:0000837!6.73e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.16e-42;5!CL:0000163;2.42e-23;9!CL:0000037;2.26e-09;1!CL:0001024;2.26e-09;1 | |ontology_enrichment_celltype_v019=CL:0000097;5.16e-42;5!CL:0000163;2.42e-23;9!CL:0000037;2.26e-09;1!CL:0001024;2.26e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.38e-42,5;CL:0002028,5.38e-42,5;CL:0000163,2.48e-23,9;CL:0001024,2.46e-09,1;CL:0000763,1.91e-07,108;CL:0000049,1.91e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;9.29e-10;1 | |ontology_enrichment_disease_v019=DOID:8552;9.29e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8552,8.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.83e-36!15;UBERON:0000179!1.83e-36!15;UBERON:0000463!1.83e-36!15;UBERON:0002390!2.34e-19!102;UBERON:0003061!2.34e-19!102;UBERON:0002193!4.51e-17!112;UBERON:0007023!1.49e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!1.83e-36!15;UBERON:0000179!1.83e-36!15;UBERON:0000463!1.83e-36!15;UBERON:0002390!2.34e-19!102;UBERON:0003061!2.34e-19!102;UBERON:0002193!4.51e-17!112;UBERON:0007023!1.49e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.54e-44;15!UBERON:0000179;2.54e-44;15!UBERON:0000463;2.54e-44;15!UBERON:0002390;1.58e-22;32!UBERON:0002193;2.51e-12;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.54e-44;15!UBERON:0000179;2.54e-44;15!UBERON:0000463;2.54e-44;15!UBERON:0002390;1.58e-22;32!UBERON:0002193;2.51e-12;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.54e-44,15;UBERON:0000179,2.54e-44,15;UBERON:0000463,2.54e-44,15;UBERON:0002390,1.76e-16,98;UBERON:0003061,1.76e-16,98;UBERON:0002193,1.00e-14,108 | |||
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| ||
|short_description=p3@ENST00000425264 | |short_description=p3@ENST00000425264 | ||
}} | }} |
Latest revision as of 10:50, 23 July 2015
Short description: | p3@ENST00000425264 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000425264_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -51bp_to_ENST00000425264_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.38e-42 | 5 |
basophil mast progenitor cell | 5.38e-42 | 5 |
endocrine cell | 2.48e-23 | 9 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.46e-09 | 1 |
myeloid cell | 1.91e-07 | 108 |
common myeloid progenitor | 1.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 2.54e-44 | 15 |
haemolymphatic fluid | 2.54e-44 | 15 |
organism substance | 2.54e-44 | 15 |
hematopoietic system | 1.76e-16 | 98 |
blood island | 1.76e-16 | 98 |
hemolymphoid system | 1.00e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 8.91e-10 | 1 |