FFCP PHASE1:Hg19::chr7:150945865..150945896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6604 | |EntrezGene=6604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |HGNC=11108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000472988_5end | |association_with_transcript=-94bp_to_ENST00000472988_5end | ||
|cluster_id=chr7:150945865..150945896,- | |||
|description=CAGE_peak_4_at_SMARCD3_5end | |description=CAGE_peak_4_at_SMARCD3_5end | ||
|id=chr7:150945865..150945896,- | |id=chr7:150945865..150945896,- | ||
|ontology_enrichment_celltype=CL:0000055!1.16e-21!180;CL:0000183!2.19e-16!59;CL:0000680!6.58e-16!57;CL:0000056!6.58e-16!57;CL:0000355!6.58e-16!57;CL:0000187!1.64e-15!54;CL:0000393!3.09e-14!60;CL:0000211!3.09e-14!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!3.14e-11!32;CL:0000057!4.53e-07!75;CL:0000220!7.23e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.16e-21!180;CL:0000183!2.19e-16!59;CL:0000680!6.58e-16!57;CL:0000056!6.58e-16!57;CL:0000355!6.58e-16!57;CL:0000187!1.64e-15!54;CL:0000393!3.09e-14!60;CL:0000211!3.09e-14!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!3.14e-11!32;CL:0000057!4.53e-07!75;CL:0000220!7.23e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.58e-16;32!CL:0000192;3.68e-13;43!CL:0000187;1.63e-10;55!CL:0000393;4.34e-09;61!CL:0000211;4.34e-09;61!CL:0002594;3.75e-08;4 | |ontology_enrichment_celltype_v019=CL:0000359;7.58e-16;32!CL:0000192;3.68e-13;43!CL:0000187;1.63e-10;55!CL:0000393;4.34e-09;61!CL:0000211;4.34e-09;61!CL:0002594;3.75e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.40e-19,58;CL:0000056,3.40e-19,58;CL:0000355,3.40e-19,58;CL:0000187,1.11e-17,55;CL:0000359,5.17e-17,32;CL:0000192,2.22e-16,43;CL:0000514,2.22e-16,43;CL:0000393,2.63e-16,61;CL:0000211,2.63e-16,61;CL:0002594,4.21e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.68e-13;43!CL:0000355;3.06e-11;58!UBERON:0005062;5.71e-07;4!UBERON:0007284;5.71e-07;4 | |ontology_enrichment_development_v019=CL:0000514;3.68e-13;43!CL:0000355;3.06e-11;58!UBERON:0005062;5.71e-07;4!UBERON:0007284;5.71e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-15;42!UBERON:0003509;1.11e-15;42!UBERON:0004572;1.11e-15;42!UBERON:0004573;3.56e-11;33!UBERON:0004571;3.56e-11;33!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0001134;2.81e-09;16!UBERON:0002036;2.81e-09;16!UBERON:0007100;3.14e-09;25!UBERON:0004457;3.65e-09;9!UBERON:0000042;3.65e-09;9!UBERON:0007500;8.78e-09;56!UBERON:0001981;8.78e-09;56!UBERON:0004537;8.78e-09;56!UBERON:0002385;1.63e-08;31!UBERON:0001015;1.63e-08;31!UBERON:0000383;1.63e-08;31!UBERON:0001310;3.75e-08;4!UBERON:0010313;3.88e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-15;42!UBERON:0003509;1.11e-15;42!UBERON:0004572;1.11e-15;42!UBERON:0004573;3.56e-11;33!UBERON:0004571;3.56e-11;33!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0001134;2.81e-09;16!UBERON:0002036;2.81e-09;16!UBERON:0007100;3.14e-09;25!UBERON:0004457;3.65e-09;9!UBERON:0000042;3.65e-09;9!UBERON:0007500;8.78e-09;56!UBERON:0001981;8.78e-09;56!UBERON:0004537;8.78e-09;56!UBERON:0002385;1.63e-08;31!UBERON:0001015;1.63e-08;31!UBERON:0000383;1.63e-08;31!UBERON:0001310;3.75e-08;4!UBERON:0010313;3.88e-07;10 | ||
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| ||
|short_description=p4@SMARCD3 | |short_description=p4@SMARCD3 | ||
}} | }} |
Latest revision as of 06:12, 17 September 2015
Short description: | p4@SMARCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMARCD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000472988_5end |
EntrezGene: | SMARCD3 |
HGNC: | 11108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.40e-19 | 58 |
myoblast | 3.40e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-19 | 58 |
muscle cell | 1.11e-17 | 55 |
vascular associated smooth muscle cell | 5.17e-17 | 32 |
smooth muscle cell | 2.22e-16 | 43 |
smooth muscle myoblast | 2.22e-16 | 43 |
electrically responsive cell | 2.63e-16 | 61 |
electrically active cell | 2.63e-16 | 61 |
smooth muscle cell of the umbilical artery | 4.21e-08 | 4 |