FFCP PHASE1:Hg19::chr5:180017106..180017107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:180017106..180017107,+ | |||
|coexpression_cluster_id=C365 | |coexpression_cluster_id=C365 | ||
|description=CAGE_peak_at_chr5:180017106..180017107,+ | |description=CAGE_peak_at_chr5:180017106..180017107,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29 | |ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.49e-79!2;UBERON:0001736!9.91e-41!1;UBERON:0006298!9.91e-41!1;UBERON:0001044!2.38e-27!6;UBERON:0003293!2.38e-27!6;UBERON:0003294!2.38e-27!6;UBERON:0010047!2.38e-27!6;UBERON:0000167!2.38e-27!6;UBERON:0003126!1.44e-23!7;UBERON:0001005!1.44e-23!7;UBERON:0001829!3.81e-21!2;UBERON:0000341!5.70e-21!2;UBERON:0003408!6.93e-17!10;UBERON:0007196!2.37e-12!14;UBERON:0001558!2.37e-12!14;UBERON:0000078!7.42e-10!18;UBERON:0001004!1.73e-09!72;UBERON:0000166!1.37e-08!21;UBERON:0001041!3.96e-07!98;UBERON:0000464!9.48e-07!104 | |ontology_enrichment_uberon=UBERON:0003127!3.49e-79!2;UBERON:0001736!9.91e-41!1;UBERON:0006298!9.91e-41!1;UBERON:0001044!2.38e-27!6;UBERON:0003293!2.38e-27!6;UBERON:0003294!2.38e-27!6;UBERON:0010047!2.38e-27!6;UBERON:0000167!2.38e-27!6;UBERON:0003126!1.44e-23!7;UBERON:0001005!1.44e-23!7;UBERON:0001829!3.81e-21!2;UBERON:0000341!5.70e-21!2;UBERON:0003408!6.93e-17!10;UBERON:0007196!2.37e-12!14;UBERON:0001558!2.37e-12!14;UBERON:0000078!7.42e-10!18;UBERON:0001004!1.73e-09!72;UBERON:0000166!1.37e-08!21;UBERON:0001041!3.96e-07!98;UBERON:0000464!9.48e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.55e-98;2!UBERON:0003126;1.78e-29;7!UBERON:0001005;1.78e-29;7!UBERON:0007196;1.22e-14;15!UBERON:0001558;1.22e-14;15!UBERON:0005181;4.53e-08;35 | |ontology_enrichment_uberon_v019=UBERON:0003127;1.55e-98;2!UBERON:0003126;1.78e-29;7!UBERON:0001005;1.78e-29;7!UBERON:0007196;1.22e-14;15!UBERON:0001558;1.22e-14;15!UBERON:0005181;4.53e-08;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.55e-98,2;UBERON:0003126,1.78e-29,7;UBERON:0001005,1.78e-29,7;UBERON:0007196,1.22e-14,15;UBERON:0001558,1.22e-14,15;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35 | |||
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|short_description=p@chr5:180017106..180017107,+ | |short_description=p@chr5:180017106..180017107,+ | ||
}} | }} |
Latest revision as of 13:58, 30 July 2015
Short description: | p@chr5:180017106..180017107, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:180017106..180017107, + |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.55e-98 | 2 |
trachea | 1.78e-29 | 7 |
respiratory airway | 1.78e-29 | 7 |
tracheobronchial tree | 1.22e-14 | 15 |
lower respiratory tract | 1.22e-14 | 15 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |