FFCP PHASE1:Hg19::chr10:128077058..128077071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|TSSclassifier=strong | |||
|UniProt=O43184,Q5JRP2 | |UniProt=O43184,Q5JRP2 | ||
|association_with_transcript=-34bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |association_with_transcript=-34bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | ||
|cluster_id=chr10:128077058..128077071,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_2_at_ADAM12_5end | |description=CAGE_peak_2_at_ADAM12_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000057!4.55e-20!75;CL:0000048!3.06e-14!430;CL:0000680!7.54e-14!57;CL:0000056!7.54e-14!57;CL:0000355!7.54e-14!57;CL:0000723!8.59e-14!436;CL:0000183!1.24e-13!59;CL:0000034!1.23e-12!444;CL:0000187!1.33e-12!54;CL:0002620!5.64e-11!23;CL:0000393!5.78e-11!60;CL:0000211!5.78e-11!60;CL:0000192!7.33e-11!42;CL:0000514!7.33e-11!42;CL:0002371!1.11e-08!591;CL:0000359!3.64e-08!32;CL:0000144!1.68e-07!625;CL:0002320!2.98e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000057!4.55e-20!75;CL:0000048!3.06e-14!430;CL:0000680!7.54e-14!57;CL:0000056!7.54e-14!57;CL:0000355!7.54e-14!57;CL:0000723!8.59e-14!436;CL:0000183!1.24e-13!59;CL:0000034!1.23e-12!444;CL:0000187!1.33e-12!54;CL:0002620!5.64e-11!23;CL:0000393!5.78e-11!60;CL:0000211!5.78e-11!60;CL:0000192!7.33e-11!42;CL:0000514!7.33e-11!42;CL:0002371!1.11e-08!591;CL:0000359!3.64e-08!32;CL:0000144!1.68e-07!625;CL:0002320!2.98e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.36e-15;55!CL:0000048;6.36e-14;58!CL:0000723;3.32e-13;61!CL:0000034;3.95e-10;69!CL:0002620;6.54e-10;23!CL:0002320;1.02e-07;188!CL:0002334;2.08e-07;12!CL:0000499;4.24e-07;28!CL:0000359;8.77e-07;32 | |ontology_enrichment_celltype_v019=CL:0000134;3.36e-15;55!CL:0000048;6.36e-14;58!CL:0000723;3.32e-13;61!CL:0000034;3.95e-10;69!CL:0002620;6.54e-10;23!CL:0002320;1.02e-07;188!CL:0002334;2.08e-07;12!CL:0000499;4.24e-07;28!CL:0000359;8.77e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.38e-19,427;CL:0000723,9.98e-19,433;CL:0000034,1.26e-17,441;CL:0000057,1.68e-15,76;CL:0002320,4.58e-13,361;CL:0000219,4.34e-11,386;CL:0000680,1.11e-10,58;CL:0000056,1.11e-10,58;CL:0000355,1.11e-10,58;CL:0000134,1.13e-10,354;CL:0002620,7.43e-10,23;CL:0000187,3.51e-09,55;CL:0000393,1.79e-07,61;CL:0000211,1.79e-07,61;CL:0002334,2.06e-07,12;CL:0000499,4.10e-07,28;CL:0000192,4.69e-07,43;CL:0000514,4.69e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.68e-08!14 | |ontology_enrichment_disease=DOID:2394!3.68e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.16e-12;14 | |ontology_enrichment_disease_v019=DOID:2394;5.16e-12;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.56e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.12e-13!83;UBERON:0002329!2.12e-13!83;UBERON:0003077!2.12e-13!83;UBERON:0003059!2.12e-13!83;UBERON:0007282!2.12e-13!83;UBERON:0009618!2.12e-13!83;UBERON:0007285!2.12e-13!83;UBERON:0004290!3.39e-13!70;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0002385!8.65e-11!63;UBERON:0001015!8.65e-11!63;UBERON:0000383!8.65e-11!63;UBERON:0000486!3.93e-10!82;UBERON:0002199!1.18e-08!45;UBERON:0002416!1.18e-08!45;UBERON:0002384!1.93e-07!375;UBERON:0002097!1.98e-07!40;UBERON:0000475!3.23e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!2.12e-13!83;UBERON:0002329!2.12e-13!83;UBERON:0003077!2.12e-13!83;UBERON:0003059!2.12e-13!83;UBERON:0007282!2.12e-13!83;UBERON:0009618!2.12e-13!83;UBERON:0007285!2.12e-13!83;UBERON:0004290!3.39e-13!70;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0002385!8.65e-11!63;UBERON:0001015!8.65e-11!63;UBERON:0000383!8.65e-11!63;UBERON:0000486!3.93e-10!82;UBERON:0002199!1.18e-08!45;UBERON:0002416!1.18e-08!45;UBERON:0002384!1.93e-07!375;UBERON:0002097!1.98e-07!40;UBERON:0000475!3.23e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.68e-08;198!UBERON:0002385;9.21e-07;31!UBERON:0001015;9.21e-07;31!UBERON:0000383;9.21e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002384;6.68e-08;198!UBERON:0002385;9.21e-07;31!UBERON:0001015;9.21e-07;31!UBERON:0000383;9.21e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.40e-13,371;UBERON:0002329,1.58e-09,71;UBERON:0003059,1.58e-09,71;UBERON:0007282,1.58e-09,71;UBERON:0004290,1.58e-09,71;UBERON:0009618,1.58e-09,71;UBERON:0001134,2.20e-09,62;UBERON:0002036,2.20e-09,62;UBERON:0003082,2.20e-09,62;UBERON:0003077,2.96e-09,72;UBERON:0007285,2.96e-09,72;UBERON:0007524,5.42e-09,73;UBERON:0002385,8.32e-09,64;UBERON:0001015,8.32e-09,64;UBERON:0000383,8.32e-09,64;UBERON:0007503,2.57e-08,78;UBERON:0000486,2.51e-07,83;UBERON:0002199,4.85e-07,46;UBERON:0002416,4.85e-07,46;UBERON:0006876,7.16e-07,11 | |||
|phase1_expression=0.908391896352783,2.99740733447376,4.79244973926302,1.0007329835313,5.81049422755474,0,0,6.31719873426831,1.82829939739887,0.245733936501509,0,0,0,1.73272894144065,3.31397375727916,1.34465029290355,3.01347264011988,0,0.975865597581014,12.188984749602,4.69201589861782,9.71709636582072,3.72106783270374,4.10623275218653,2.00868223351684,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.512365278902701,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0,0,0.403213486449465,0,0,0,0,0.255725123687061,4.69870898099936,0,3.76600949298142,9.54343136461319,4.37971383272372,2.9305793320861,1.99556457716308,1.75669571386252,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,1.51956613997496,3.04541115870403,20.9390733146634,4.25602058638028,0.560677600142307,0,1.97334038733728,0.622422070799533,0.269421344139376,0.490385709340376,44.6504411552548,37.4514350911999,0,0.936480230490962,0.570471821544449,0.298897361103602,1.17434498643765,0.647491777472526,1.12360645361799,0.61246251376468,0.245668634623536,0.309977343527296,1.18800285728205,0.989067717114227,4.55080680969013,2.15585442544872,0.505008341862199,0.125118519871964,0.554128230968366,0.877955241761676,1.22595118319608,1.50238058906597,0.340296549480063,8.07253360599879,3.63047560991565,7.2056846394251,9.90300617078528,5.87399416659102,3.86460810068444,2.04728541964749,12.8270012503362,8.18470843354068,6.05841058185875,4.51044503347267,1.93975268182574,11.3603069605317,2.21654616100809,2.03472710772585,0,0,0,0,0,0,0.310983165046111,0,0,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,3.94605963686609,0,0,0,0,0,1.03993478527958,0,1.04337364477569,3.28744343860301,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,9.36060152002293,8.4526496652697,1.24396869324463,1.44119953416961,5.0496973370552,0.317489471460845,0,0,0,0.205654985406647,1.20137223137567,0.857479297891735,5.38229204857731,5.23152082599936,6.82046058134835,24.6908977097356,0,0.845302752556,11.1694008965646,4.16029747645464,1.54324424557285,0,1.5985330740966,0.285955987316295,0,1.64648067356154,3.25736184293735,0,0,1.50719688529793,2.61460037580088,0,0,0,0,9.10574450868014,8.04033550838797,0,1.88215698667853,4.10952645100767,2.68591444859843,0,0.985153801009636,0,0.128343036279748,4.31960861178188,0,0,0.837581326671744,0.637938751653163,0,0,0,1.96306386750624,1.00034104211935,1.35632511849868,2.70362119990049,6.95873056308931,2.99634588564476,3.86566669475954,0.601892199455438,0,1.03473071292505,13.2845119707087,8.84972009000175,1.30325421702124,19.5801157462741,7.89229874764969,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,2.72918588600655,3.06923946576125,4.49056151092918,5.12556597022804,2.55853624533352,9.97294311090366,0,3.85524234506639,5.50441348470694,3.44934055257998,0.519254429183621,2.32420756919918,0,0,0,5.28146461557191,4.00600569614778,1.44236856455367,0,0.616122696835318,0,0,0.105551628892876,0,0,0,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,297.891564673565,0.824125183365091,0.247528499761764,0.574265537996172,0,1.6068392984416,2.32009723901093,5.85384745035649,3.68408819342711,0.827019434907183,2.68550612170684,1.59518363305651,6.13631717395926,11.0399724201954,0.165284915360978,0,0.510450849978337,0,0.929691098594572,7.870308670766,0.6970372701606,4.31247012246524,1.06461206063404,1.73986598415015,1.29726953372744,1.00187420719394,9.67611760335135,3.79655309662471,1.90630193923825,0.767693373934002,0.42793898803392,0.95460974377781,0,1.2591072030832,6.86342574340137,3.76999687506197,1.2130948894399,0,2.10629228119491,0.48763373908959,1.94970791705028,3.16950440270266,0.818999468447914,1.69686518344455,1.13008116620243,0.551365343546124,0,0.438450885253763,0.578775534266688,1.31178950409327,4.26111791621678,1.239293992399,3.09865162785466,0.286822704408103,0.982490410131212,3.5667105148125,0.354761064070598,0.633322905892992,2.30506425071931,0,0.349934720244983,0,0,0,295.046671634426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,8.11731248108146,0,0,0,0.422008249231538,2.00355669041231,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.394573622547734,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0.964771509003264,1.52581736317083,0,0,0,0,0,0.692552326534174,0.455768223388005,0,0,0,34.1331240913154,8.06058821936388,59.1668601380685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0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| ||
|short_description=p2@ADAM12 | |short_description=p2@ADAM12 | ||
}} | }} |
Latest revision as of 00:24, 17 September 2015
Short description: | p2@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAM12_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -34bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.38e-19 | 427 |
somatic stem cell | 9.98e-19 | 433 |
stem cell | 1.26e-17 | 441 |
fibroblast | 1.68e-15 | 76 |
connective tissue cell | 4.58e-13 | 361 |
motile cell | 4.34e-11 | 386 |
muscle precursor cell | 1.11e-10 | 58 |
myoblast | 1.11e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-10 | 58 |
mesenchymal cell | 1.13e-10 | 354 |
skin fibroblast | 7.43e-10 | 23 |
muscle cell | 3.51e-09 | 55 |
electrically responsive cell | 1.79e-07 | 61 |
electrically active cell | 1.79e-07 | 61 |
preadipocyte | 2.06e-07 | 12 |
stromal cell | 4.10e-07 | 28 |
smooth muscle cell | 4.69e-07 | 43 |
smooth muscle myoblast | 4.69e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.40e-13 | 371 |
somite | 1.58e-09 | 71 |
presomitic mesoderm | 1.58e-09 | 71 |
presumptive segmental plate | 1.58e-09 | 71 |
dermomyotome | 1.58e-09 | 71 |
trunk paraxial mesoderm | 1.58e-09 | 71 |
skeletal muscle tissue | 2.20e-09 | 62 |
striated muscle tissue | 2.20e-09 | 62 |
myotome | 2.20e-09 | 62 |
paraxial mesoderm | 2.96e-09 | 72 |
presumptive paraxial mesoderm | 2.96e-09 | 72 |
dense mesenchyme tissue | 5.42e-09 | 73 |
muscle tissue | 8.32e-09 | 64 |
musculature | 8.32e-09 | 64 |
musculature of body | 8.32e-09 | 64 |
epithelial vesicle | 2.57e-08 | 78 |
multilaminar epithelium | 2.51e-07 | 83 |
integument | 4.85e-07 | 46 |
integumental system | 4.85e-07 | 46 |
vasculature of organ | 7.16e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.56e-12 | 14 |