FFCP PHASE1:Hg19::chr4:175443630..175443646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3248 | |EntrezGene=3248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5154 | |HGNC=5154 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV57,E7EV11 | |UniProt=B4DV57,E7EV11 | ||
|association_with_transcript=0bp_to_ENST00000296521,ENST00000422112_5end | |association_with_transcript=0bp_to_ENST00000296521,ENST00000422112_5end | ||
|cluster_id=chr4:175443630..175443646,- | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_1_at_HPGD_5end | |description=CAGE_peak_1_at_HPGD_5end | ||
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|ontology_enrichment_celltype=CL:0000037!9.45e-08!172;CL:0000566!9.45e-08!172;CL:0002032!1.61e-07!165;CL:0000837!1.61e-07!165;CL:0000988!1.83e-07!182;CL:0000084!4.64e-07!25;CL:0000827!4.64e-07!25 | |ontology_enrichment_celltype=CL:0000037!9.45e-08!172;CL:0000566!9.45e-08!172;CL:0002032!1.61e-07!165;CL:0000837!1.61e-07!165;CL:0000988!1.83e-07!182;CL:0000084!4.64e-07!25;CL:0000827!4.64e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.78e-08;18!CL:0000789;9.78e-08;18!CL:0002419;9.78e-08;18!CL:0000084;9.79e-08;25 | |ontology_enrichment_celltype_v019=CL:0000791;9.78e-08;18!CL:0000789;9.78e-08;18!CL:0002419;9.78e-08;18!CL:0000084;9.79e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.03e-08,18;CL:0000789,7.03e-08,18;CL:0002420,7.03e-08,18;CL:0002419,7.03e-08,18;CL:0000790,7.03e-08,18;CL:0000084,8.47e-08,25;CL:0000827,8.47e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.78e-08;18 | |ontology_enrichment_development_v019=CL:0000790;9.78e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-15!115;UBERON:0004921!6.84e-07!129;UBERON:0004185!6.84e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!3.09e-15!115;UBERON:0004921!6.84e-07!129;UBERON:0004185!6.84e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.14e-07;33!UBERON:0005409;2.41e-07;22!UBERON:0000922;3.02e-07;49!UBERON:0000160;8.75e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.14e-07;33!UBERON:0005409;2.41e-07;22!UBERON:0000922;3.02e-07;49!UBERON:0000160;8.75e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,7.43e-11,118;UBERON:0007023,1.36e-08,114;UBERON:0001007,4.12e-08,145;UBERON:0001555,4.12e-08,145;UBERON:0007026,4.12e-08,145;UBERON:0004119,6.43e-08,160;UBERON:0000925,6.43e-08,160;UBERON:0006595,6.43e-08,160;UBERON:0005409,8.03e-08,25;UBERON:0000160,7.11e-07,17 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,20.2639902534648,1.26343974685366,2.87304191019822,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,2.6893005858071,0,0,0,0,0,0,0,0,0,0,0,0,27.5354993794233,7.67658796194425,4.18003532953405,0,0,0,0,0,2.34880351467878,0,1.60435557976113,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,1.16214518452842,0,1.23882548358041,0.28769239232215,0.512321413058201,1.18241114944293,0.689491361473237,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,2.73069305631066,1.77901850772711,2.98711155796555,0.400395987036012,2.29900975981793,3.30522436392431,0.954053754535364,0,0.587237189370939,0.382273228125229,19.8256992868539,7.8471198817415,9.48182705190277,5.11445402295966,6.28817220398664,6.16804496998528,6.18590032945509,1.62961133316795,1.4203434172042,1.94826728407911,36.8768612289925,76.8921418509325,82.8536765742743,83.9491977671548,46.2409664209687,82.7177450480826,3.78207180588455,11.3303507292198,3.18783394308558,1.18629250529648,2.1403266247177,4.18142095219907,4.07913633711238,1.53288197440768,1.03088233644789,0.759059076058509,5.41561204350964,7.1619179924206,10.4549724889321,5.57127940587759,4.8634912238679,7.49584359314075,3.78843603270427,4.10563998460523,1.61285394579786,2.94184215361858,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,15.5865099842278,0.728590576585084,0,0,0.174129737299267,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0.354668382198357,2.24271040056923,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.61246251376468,0.122834317311768,3.30642499762449,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0,5.73276418809098,4.10842281796604,12.4327518870385,11.4027160516907,17.662459561294,1.45990943630332,0,1.28648187638577,0,0,0,3.19428360107579,2.86593973132773,2.6511213287183,2.42646740011267,2.17879444092406,1.89816495288877,2.15730093056263,3.13954344200554,1.92373578473195,0,0,0,0,343.506144367162,214.256333235722,115.794821709555,0.882926198829301,46.4896297692969,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,7.87894419479671,62.2451345270372,17.6871083123587,0,0,0,0.626909658919938,0.290633938513962,0,10468.108478813,8022.70916198312,1256.20105206154,1071.24361374827,1522.35750468872,5.58781469771088,3.05590740446622,1.17217447210047,0,3.08482478109971,0.300343057843917,17.4354123904653,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,7.29742683847143,1.00451418286425,16.8667151586425,0,0,0,0,0.205476322550383,0,9.19098180746924,1.97030760201927,2.15627574859517,7.05886699538616,0,0,0,0.335032530668698,0,1.49801404789436,0,3.31532410748828,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,4.75566460082641,2.37285620900479,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,1.64254312027618,0,0.348631135379878,39.037602218094,1.00253235151642,11.3259616391152,0,0,0,0,0.308061348417659,0,0,2.21658420675039,0,0,0.215915916102139,1.54227252690289,1.62567862526312,5.01689773854853,0.509752546090077,2.49322802678617,0.671624264166535,33.1082413735361,44.705462125258,0,0,0.325378394664303,232.048358230671,0.366277859273374,0.907604499126468,0,0.650060246036521,0,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0.384380134730212,0.382838137483752,1.2138933702666,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0,0,7.80474340955315,0,0,0,0,0.0962221127255121,1.34060455107157,0,229.428442493011,3.87454835404107,3.36942951335251,8.42517291719684,7.81059560703662,5.58192370155386,6.117097657139,9.1143549947866,8.09988036556483,3.70226045777575,3.8908398671563,4.86028293514303,3.96562588147135,0,0,0.490080431962063,0,0,0,48.6250131822908,16.7646672003566,58.4091378903718,19.6856431933211,0,0.561594356226918,4.56469358066384,0.156679895773023,5.01268954180134,98.1892311249299,0,0.201799707191048,30.6609291137035,0,0,0,0,0,2694.97176330595,34.4644717053595,1.08182271390393,21.6496779198583,1.4098700508785,7.11134053551235,14.9438342857332,0,1.00299045849731,0,316.575186762177,3.26661148915902,0.614321404198464,0.994147647766298,0.281338832821026,0,0.494411622680279,1.05562704063997,1.79323189425963,25.6944041443967,7.55798243562828,0.102268682502155,0,0,2.42644548097782,1.43216939740487,0,95.9800336847364,9.57932369387759,0,5.81599647657131,0.74214478529481,0,0,0,2.17499872630438,0.227586896570999,6.61059490761192,0.709163045303809,1.03423011972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| ||
|short_description=p1@HPGD | |short_description=p1@HPGD | ||
}} | }} |
Latest revision as of 20:47, 16 September 2015
Short description: | p1@HPGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPGD_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000296521, ENST00000422112_5end |
EntrezGene: | HPGD |
HGNC: | 5154 |
UniProt: | B4DV57E7EV11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.03e-08 | 18 |
alpha-beta T cell | 7.03e-08 | 18 |
immature T cell | 7.03e-08 | 18 |
mature T cell | 7.03e-08 | 18 |
immature alpha-beta T cell | 7.03e-08 | 18 |
T cell | 8.47e-08 | 25 |
pro-T cell | 8.47e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 7.43e-11 | 118 |
adult organism | 1.36e-08 | 114 |
digestive system | 4.12e-08 | 145 |
digestive tract | 4.12e-08 | 145 |
primitive gut | 4.12e-08 | 145 |
endoderm-derived structure | 6.43e-08 | 160 |
endoderm | 6.43e-08 | 160 |
presumptive endoderm | 6.43e-08 | 160 |
gastrointestinal system | 8.03e-08 | 25 |
intestine | 7.11e-07 | 17 |