FFCP PHASE1:Hg19::chr2:119739008..119739032,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:119739008..119739032,- | |||
|coexpression_cluster_id=C433 | |coexpression_cluster_id=C433 | ||
|description=CAGE_peak_at_chr2:119739008..119739032,- | |description=CAGE_peak_at_chr2:119739008..119739032,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002194!2.26e-30!63;CL:0000576!2.26e-30!63;CL:0000040!2.26e-30!63;CL:0000559!2.26e-30!63;CL:0002009!3.33e-29!65;CL:0000839!1.42e-26!70;CL:0000557!4.30e-26!71;CL:0000766!7.10e-24!76;CL:0002057!2.29e-21!42;CL:0000860!1.38e-19!45;CL:0002087!7.32e-15!119;CL:0000763!8.68e-14!112;CL:0000049!8.68e-14!112;CL:0002031!9.45e-12!124;CL:0000738!1.82e-11!140;CL:0002619!2.51e-10!3;CL:0000037!5.87e-08!172;CL:0000566!5.87e-08!172;CL:0000235!8.29e-08!10;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9;CL:0000988!3.92e-07!182;CL:0002032!3.99e-07!165;CL:0000837!3.99e-07!165 | |ontology_enrichment_celltype=CL:0002194!2.26e-30!63;CL:0000576!2.26e-30!63;CL:0000040!2.26e-30!63;CL:0000559!2.26e-30!63;CL:0002009!3.33e-29!65;CL:0000839!1.42e-26!70;CL:0000557!4.30e-26!71;CL:0000766!7.10e-24!76;CL:0002057!2.29e-21!42;CL:0000860!1.38e-19!45;CL:0002087!7.32e-15!119;CL:0000763!8.68e-14!112;CL:0000049!8.68e-14!112;CL:0002031!9.45e-12!124;CL:0000738!1.82e-11!140;CL:0002619!2.51e-10!3;CL:0000037!5.87e-08!172;CL:0000566!5.87e-08!172;CL:0000235!8.29e-08!10;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9;CL:0000988!3.92e-07!182;CL:0002032!3.99e-07!165;CL:0000837!3.99e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.30e-44;6!CL:0002619;2.63e-23;3!CL:0000473;6.68e-07;39!CL:0000234;6.68e-07;39 | |ontology_enrichment_celltype_v019=CL:0000235;1.30e-44;6!CL:0002619;2.63e-23;3!CL:0000473;6.68e-07;39!CL:0000234;6.68e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.04e-44,6;CL:0002619,2.63e-23,3;CL:0002194,7.25e-10,59;CL:0000576,7.25e-10,59;CL:0000040,7.25e-10,59;CL:0000559,7.25e-10,59;CL:0002009,1.54e-09,61;CL:0000839,8.24e-09,66;CL:0000557,1.12e-08,67;CL:0000766,4.58e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.58e-10;7!UBERON:0006965;1.64e-09;2 | |ontology_enrichment_development_v019=UBERON:0004872;2.58e-10;7!UBERON:0006965;1.64e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.90e-25!102;UBERON:0003061!6.90e-25!102;UBERON:0002193!1.63e-23!112;UBERON:0002405!7.33e-23!115;UBERON:0002371!2.67e-22!80;UBERON:0001474!3.25e-20!86;UBERON:0004765!4.27e-16!101;UBERON:0001434!4.27e-16!101;UBERON:0003081!6.70e-11!216;UBERON:0007023!9.56e-09!115;UBERON:0002204!1.18e-07!167;UBERON:0000926!9.26e-07!448;UBERON:0004120!9.26e-07!448;UBERON:0006603!9.26e-07!448;UBERON:0002360!9.55e-07!2;UBERON:0000094!9.55e-07!2;UBERON:0007645!9.55e-07!2 | |ontology_enrichment_uberon=UBERON:0002390!6.90e-25!102;UBERON:0003061!6.90e-25!102;UBERON:0002193!1.63e-23!112;UBERON:0002405!7.33e-23!115;UBERON:0002371!2.67e-22!80;UBERON:0001474!3.25e-20!86;UBERON:0004765!4.27e-16!101;UBERON:0001434!4.27e-16!101;UBERON:0003081!6.70e-11!216;UBERON:0007023!9.56e-09!115;UBERON:0002204!1.18e-07!167;UBERON:0000926!9.26e-07!448;UBERON:0004120!9.26e-07!448;UBERON:0006603!9.26e-07!448;UBERON:0002360!9.55e-07!2;UBERON:0000094!9.55e-07!2;UBERON:0007645!9.55e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.72e-18;1!UBERON:0006518;5.72e-18;1!UBERON:0008949;5.72e-18;1!UBERON:0000101;5.72e-18;1!UBERON:0002167;5.72e-18;1!UBERON:0000029;1.12e-17;1!UBERON:0002106;9.37e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002171;5.72e-18;1!UBERON:0006518;5.72e-18;1!UBERON:0008949;5.72e-18;1!UBERON:0000101;5.72e-18;1!UBERON:0002167;5.72e-18;1!UBERON:0000029;1.12e-17;1!UBERON:0002106;9.37e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.23e-18,1;UBERON:0006518,6.23e-18,1;UBERON:0008949,6.23e-18,1;UBERON:0000101,6.23e-18,1;UBERON:0002167,6.23e-18,1;UBERON:0000029,7.37e-18,1;UBERON:0002405,8.94e-11,93;UBERON:0002193,3.30e-09,108;UBERON:0002390,7.59e-08,98;UBERON:0003061,7.59e-08,98;UBERON:0002371,1.24e-07,76;UBERON:0001474,4.63e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,4.92614043327834,0.971680998056939,4.63636021741536,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0.545812300115692,0,0.612167784741805,0,0,0.329851300186716,0,0,0.870627715885752,0.56738522469114,0,0,0,0,0,0.736555271975129,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0948972495833,0.936017060556951,15.6062720403165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.46552233678082,0,0,0,0,0,0.854299300541557,0,2.07119527673598,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,1.03382309777839,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,4.92614043327834,0.971680998056939,4.63636021741536,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0.545812300115692,0,0.612167784741805,0,0,0.329851300186716,0,0,0.870627715885752,0.56738522469114,0,0,0,0,0,0.736555271975129,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0948972495833,0.936017060556951,15.6062720403165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.46552233678082,0,0,0,0,0,0.854299300541557,0,2.07119527673598,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,1.03382309777839,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p@chr2:119739008..119739032,- | |short_description=p@chr2:119739008..119739032,- | ||
}} | }} |
Latest revision as of 23:51, 28 July 2015
Short description: | p@chr2:119739008..119739032, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:119739008..119739032, - |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.04e-44 | 6 |
adult endothelial progenitor cell | 2.63e-23 | 3 |
monopoietic cell | 7.25e-10 | 59 |
monocyte | 7.25e-10 | 59 |
monoblast | 7.25e-10 | 59 |
promonocyte | 7.25e-10 | 59 |
macrophage dendritic cell progenitor | 1.54e-09 | 61 |
myeloid lineage restricted progenitor cell | 8.24e-09 | 66 |
granulocyte monocyte progenitor cell | 1.12e-08 | 67 |
myeloid leukocyte | 4.58e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.23e-18 | 1 |
right lung lobe | 6.23e-18 | 1 |
lower lobe of lung | 6.23e-18 | 1 |
lobe of lung | 6.23e-18 | 1 |
right lung | 6.23e-18 | 1 |
lymph node | 7.37e-18 | 1 |
immune system | 8.94e-11 | 93 |
hemolymphoid system | 3.30e-09 | 108 |
hematopoietic system | 7.59e-08 | 98 |
blood island | 7.59e-08 | 98 |
bone marrow | 1.24e-07 | 76 |
bone element | 4.63e-07 | 82 |