FFCP PHASE1:Hg19::chr11:95524104..95524108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:95524104..95524108,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:95524104..95524108,- | |description=CAGE_peak_at_chr11:95524104..95524108,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.10e-13;1!CL:1000600;1.10e-13;1!CL:0000182;4.21e-10;12 | |ontology_enrichment_celltype_v019=CL:1001319;1.10e-13;1!CL:1000600;1.10e-13;1!CL:0000182;4.21e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.83e-13,1;CL:1000600,1.83e-13,1;CL:0000182,4.34e-10,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.44e-10!143;DOID:305!1.90e-10!106;DOID:14566!3.13e-09!239;DOID:162!4.04e-09!235 | |ontology_enrichment_disease=DOID:0050687!1.44e-10!143;DOID:305!1.90e-10!106;DOID:14566!3.13e-09!239;DOID:162!4.04e-09!235 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.75e-07;2 | |ontology_enrichment_disease_v019=DOID:3493;1.75e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.64e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.10e-13;1!UBERON:0001256;1.10e-13;1!UBERON:0001259;1.10e-13;1!UBERON:0002107;7.25e-11;19!UBERON:0006925;7.25e-11;19!UBERON:0002423;2.61e-08;25!UBERON:0001255;1.75e-07;2!UBERON:0001556;1.75e-07;2!UBERON:0002365;5.93e-07;31!UBERON:0002330;5.93e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004645;1.10e-13;1!UBERON:0001256;1.10e-13;1!UBERON:0001259;1.10e-13;1!UBERON:0002107;7.25e-11;19!UBERON:0006925;7.25e-11;19!UBERON:0002423;2.61e-08;25!UBERON:0001255;1.75e-07;2!UBERON:0001556;1.75e-07;2!UBERON:0002365;5.93e-07;31!UBERON:0002330;5.93e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.83e-13,1;UBERON:0001256,1.83e-13,1;UBERON:0001259,1.83e-13,1;UBERON:0002107,7.44e-11,19;UBERON:0006925,7.44e-11,19;UBERON:0008836,7.44e-11,19;UBERON:0008835,2.10e-09,22;UBERON:0003894,2.10e-09,22;UBERON:0009854,5.26e-09,23;UBERON:0007499,2.67e-08,25;UBERON:0009497,2.67e-08,25;UBERON:0000015,2.67e-08,25;UBERON:0002423,2.67e-08,25;UBERON:0006235,2.67e-08,25;UBERON:0004161,2.67e-08,25;UBERON:0009856,5.47e-08,26;UBERON:0001255,2.25e-07,2;UBERON:0001556,2.25e-07,2;UBERON:0002365,9.98e-07,31;UBERON:0002330,9.98e-07,31 | |||
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|short_description=p@chr11:95524104..95524108,- | |short_description=p@chr11:95524104..95524108,- | ||
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Latest revision as of 03:44, 24 July 2015
Short description: | p@chr11:95524104..95524108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:95524104..95524108, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.83e-13 | 1 |
lower urinary tract cell | 1.83e-13 | 1 |
hepatocyte | 4.34e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.83e-13 | 1 |
wall of urinary bladder | 1.83e-13 | 1 |
mucosa of urinary bladder | 1.83e-13 | 1 |
liver | 7.44e-11 | 19 |
digestive gland | 7.44e-11 | 19 |
liver bud | 7.44e-11 | 19 |
hepatic diverticulum | 2.10e-09 | 22 |
liver primordium | 2.10e-09 | 22 |
digestive tract diverticulum | 5.26e-09 | 23 |
epithelial sac | 2.67e-08 | 25 |
epithelium of foregut-midgut junction | 2.67e-08 | 25 |
anatomical boundary | 2.67e-08 | 25 |
hepatobiliary system | 2.67e-08 | 25 |
foregut-midgut junction | 2.67e-08 | 25 |
septum transversum | 2.67e-08 | 25 |
sac | 5.47e-08 | 26 |
urinary bladder | 2.25e-07 | 2 |
lower urinary tract | 2.25e-07 | 2 |
exocrine gland | 9.98e-07 | 31 |
exocrine system | 9.98e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.64e-07 | 2 |