FFCP PHASE1:Hg19::chr20:35177596..35177615,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:35177596..35177615,+
|short_description=p@chr20:35177596..35177615,+
|description=CAGE_peak_at_chr20:35177596..35177615,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35177596..35177615,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177596..35177615,+ | |||
|id=chr20:35177596..35177615,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.07e-15!180;CL:0000183!1.30e-11!59;CL:0000192!6.06e-11!42;CL:0000514!6.06e-11!42;CL:0000680!1.44e-10!57;CL:0000056!1.44e-10!57;CL:0000355!1.44e-10!57;CL:0000187!1.75e-10!54;CL:0000393!1.66e-08!60;CL:0000211!1.66e-08!60;CL:0000359!1.86e-08!32;CL:0000136!2.29e-08!15;CL:0000057!2.42e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.20e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.82e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.24e-12!63;UBERON:0001015!3.24e-12!63;UBERON:0000383!3.24e-12!63;UBERON:0001134!3.20e-11!61;UBERON:0002036!3.20e-11!61;UBERON:0003082!3.20e-11!61;UBERON:0005256!5.62e-10!143;UBERON:0004290!8.29e-10!70;UBERON:0000914!3.45e-09!83;UBERON:0002329!3.45e-09!83;UBERON:0003077!3.45e-09!83;UBERON:0003059!3.45e-09!83;UBERON:0007282!3.45e-09!83;UBERON:0009618!3.45e-09!83;UBERON:0007285!3.45e-09!83;UBERON:0002100!5.52e-09!216;UBERON:0003104!1.73e-08!238;UBERON:0009142!1.73e-08!238;UBERON:0000486!3.57e-08!82;UBERON:0007100!1.78e-07!27;UBERON:0000481!1.81e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.52e-09;6!UBERON:0002358;1.52e-09;6!UBERON:0003684;1.52e-09;6!UBERON:0001178;1.52e-09;6!UBERON:0007100;7.71e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.11e-09,6;UBERON:0002358,1.11e-09,6;UBERON:0003684,1.11e-09,6;UBERON:0001178,1.11e-09,6;UBERON:0007100,3.82e-08,27;UBERON:0000948,8.63e-07,24;UBERON:0005498,8.63e-07,24;UBERON:0004140,8.63e-07,24;UBERON:0009881,8.63e-07,24;UBERON:0004141,8.63e-07,24;UBERON:0003084,8.63e-07,24;UBERON:0007005,8.63e-07,24;UBERON:0004139,8.63e-07,24;UBERON:0004291,8.63e-07,24 | |||
|phase1_expression=3.27021082687002,4.49611100171065,2.53717927372748,4.00293193412522,5.81049422755474,5.23403114460221,12.6649939084155,0,0.783556884599516,0.491467873003018,3.48900583986214,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,2.92124036154949,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,1.00267582127178,0.434539556882471,0,0.486634870302636,0.189069634328136,1.99556457716308,0.87834785693126,0.72038491523742,0.364295288292542,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,6.46063537203914,0.886413581652058,0.662045904066094,0,0.354668382198357,2.24271040056923,4.2699598291882,2.22000793575444,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,0,4.20353779773547,0,1.43723628363248,0,0.125118519871964,0,0,5.21029252858333,2.85452311922534,0.453728732640084,0.538168907066586,0.640672166455702,0.211931901159562,0.300091096084402,0.92747276314595,0.257640540045629,1.48893485065272,0.337552664482532,1.07180705677318,0.504867548488229,1.10459878370759,0,1.06502877754984,1.81353776809752,0.847802961552438,0.193260853163297,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0.504641701751257,0,3.12899064659632,0,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.588664395376038,0.769494313892781,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.517086863031111,0,0.845302752556,1.32969058292435,3.12022310734098,0,0,0,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0,0.602878754119172,2.61460037580088,1.29964888536674,0,0,2.10833939483032,1.4377491329495,4.59447743336456,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,4.57535895367776,3.03329280955175,1.89242898040722,2.57711112983969,1.20378439891088,13.6444502433591,1.03473071292505,0,1.10621501125022,0.868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,1.98486246255021,0.306923946576125,2.80660094433074,1.28139149255701,1.53512174720011,2.89537058058494,4.45254199334973,0.308419387605311,0.887808626565635,0.246381468041427,0,0.464841513839837,0,1.00253235151642,0,0.114814448164607,0.546273504020151,2.49136388422906,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.676695028044854,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.445160178233687,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.715624433709956,0.744316738719335,1.89827654831236,1.71567174531442,0.255897791311334,0,0,2.35484592059769,0.899362287916574,1.09814811894422,0,1.2130948894399,3.17020642346017,0.842516912477962,0.48763373908959,0.487426979262569,2.11300293513511,0.682499557039929,1.1312434556297,1.13008116620243,0,0,3.5076070820301,1.15755106853338,1.31178950409327,2.43492452355245,3.0982349809975,0.845086807596724,0.143411352204052,0.785992328104969,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0.640944426764839,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.485442086998054,0,0,0,0,0,0,0,0.222617410045812,0,0,5.57894367102995,1.65770349318689,0,0.102268682502155,0,5.59871257791253,0,0,0,8.38468947913936,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,1.15425387755696,0.455768223388005,0.23056390438806,0,0.108647371922008,0,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0.995261931078505,3.36138745112689,4.27721101453538,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,2.76209081994573,0,0,0.126373159256976,0,0,0,0,0.627865836814451,1.19472429772959,0,0,0,0.195984794828755,0.0870592065804026,4.54289337429278,0.343972064943233,0,0,0,3.68558262655994,0,0.451961481561065,0,0,0.0633107959558787,0.391102765469606,0,4.0556069000477,0,0,0.229073192331831,0,0,0,0.235694034616795,0,0,0,0.577901179803038,0,0,0,1.28929632425987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| ||
|short_description=p@chr20:35177596..35177615,+ | |||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177596..35177615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177596..35177615, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.82e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.11e-09 | 6 |
peritoneum | 1.11e-09 | 6 |
abdominal cavity | 1.11e-09 | 6 |
visceral peritoneum | 1.11e-09 | 6 |
primary circulatory organ | 3.82e-08 | 27 |
heart | 8.63e-07 | 24 |
primitive heart tube | 8.63e-07 | 24 |
primary heart field | 8.63e-07 | 24 |
anterior lateral plate mesoderm | 8.63e-07 | 24 |
heart tube | 8.63e-07 | 24 |
heart primordium | 8.63e-07 | 24 |
cardiac mesoderm | 8.63e-07 | 24 |
cardiogenic plate | 8.63e-07 | 24 |
heart rudiment | 8.63e-07 | 24 |