FFCP PHASE1:Hg19::chr20:35807714..35807756,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:35807714..35807756,+
|short_description=p1@RPN2
|description=CAGE_peak_1_at_RPN2_5end
|association_with_transcript=0bp_to_ENST00000373632,ENST00000462163_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6185 | |EntrezGene=6185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10382 | |HGNC=10382 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JYR7,F2Z3K5 | |UniProt=Q5JYR7,F2Z3K5 | ||
|association_with_transcript=0bp_to_ENST00000373632,ENST00000462163_5end | |||
|cluster_id=chr20:35807714..35807756,+ | |||
|coexpression_cluster_id=C3113 | |||
|description=CAGE_peak_1_at_RPN2_5end | |||
|id=chr20:35807714..35807756,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.53e-29!679;CL:0000004!2.53e-29!679;CL:0000255!2.53e-29!679;CL:0000012!4.81e-29!682;CL:0000144!1.06e-19!625;CL:0000003!3.51e-18!722;CL:0000063!4.55e-15!578;CL:0000055!1.36e-14!180;CL:0002371!4.68e-14!591;CL:0000057!8.82e-12!75;CL:0000048!9.63e-11!430;CL:0000723!3.63e-10!436;CL:0000034!1.36e-09!444;CL:0000220!2.64e-07!246;CL:0002321!3.99e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.80e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.89e-12,76;CL:0000048,5.67e-10,427;CL:0000723,2.03e-09,433;CL:0000034,7.21e-09,441;CL:0002321,5.53e-07,250;CL:0000066,8.31e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-14!239;DOID:162!3.05e-14!235;DOID:0050687!2.81e-09!143;DOID:305!7.17e-08!106;DOID:2394!1.32e-07!14;DOID:120!6.40e-07!27;DOID:193!8.28e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-07;14!DOID:120;6.31e-07;27!DOID:193;8.11e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.26e-14,239;DOID:162,3.05e-14,235;DOID:0050687,2.81e-09,143;DOID:305,7.17e-08,106;DOID:2394,1.32e-07,14;DOID:120,6.40e-07,27;DOID:193,8.28e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.72e-08!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.12e-08,148 | |||
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| ||
|short_description=p1@RPN2 | |||
}} | }} |
Latest revision as of 00:41, 16 September 2015
Short description: | p1@RPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPN2_5end |
Coexpression cluster: | C3113_Smooth_Fibroblast_lymphangiectasia_colon_gall_mesenchymal_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000373632, ENST00000462163_5end |
EntrezGene: | RPN2 |
HGNC: | 10382 |
UniProt: | Q5JYR7F2Z3K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.89e-12 | 76 |
multi fate stem cell | 5.67e-10 | 427 |
somatic stem cell | 2.03e-09 | 433 |
stem cell | 7.21e-09 | 441 |
embryonic cell | 5.53e-07 | 250 |
epithelial cell | 8.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 4.12e-08 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.26e-14 | 239 |
cancer | 3.05e-14 | 235 |
cell type cancer | 2.81e-09 | 143 |
carcinoma | 7.17e-08 | 106 |
ovarian cancer | 1.32e-07 | 14 |
female reproductive organ cancer | 6.40e-07 | 27 |
reproductive organ cancer | 8.28e-07 | 29 |