FFCP PHASE1:Hg19::chr15:63353384..63353407,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000561242_5end | |association_with_transcript=-25bp_to_ENST00000561242_5end | ||
|cluster_id=chr15:63353384..63353407,+ | |||
|description=CAGE_peak_20_at_TPM1_5end | |description=CAGE_peak_20_at_TPM1_5end | ||
|id=chr15:63353384..63353407,+ | |id=chr15:63353384..63353407,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.47e-10!180;CL:0000012!3.08e-09!682;CL:0000548!4.23e-09!679;CL:0000004!4.23e-09!679;CL:0000255!4.23e-09!679;CL:0000077!5.85e-09!19;CL:0002321!1.30e-08!248;CL:0000220!3.00e-08!246;CL:0000066!1.16e-07!254;CL:0000359!1.97e-07!32;CL:0000144!5.25e-07!625 | |ontology_enrichment_celltype=CL:0000055!6.47e-10!180;CL:0000012!3.08e-09!682;CL:0000548!4.23e-09!679;CL:0000004!4.23e-09!679;CL:0000255!4.23e-09!679;CL:0000077!5.85e-09!19;CL:0002321!1.30e-08!248;CL:0000220!3.00e-08!246;CL:0000066!1.16e-07!254;CL:0000359!1.97e-07!32;CL:0000144!5.25e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.78e-08;3!CL:0000067;1.78e-08;3!CL:0005012;1.78e-08;3!CL:0002304;1.78e-08;3!CL:0002589;9.12e-07;2 | |ontology_enrichment_celltype_v019=CL:0000064;1.78e-08;3!CL:0000067;1.78e-08;3!CL:0005012;1.78e-08;3!CL:0002304;1.78e-08;3!CL:0002589;9.12e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.34e-08,3;CL:0000067,1.34e-08,3;CL:0005012,1.34e-08,3;CL:0002304,1.34e-08,3;CL:0000359,4.30e-07,32;CL:0002589,7.46e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.17e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;1.17e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.43e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007625!8.56e-08!11;UBERON:0005631!3.86e-07!14;UBERON:0000158!3.86e-07!14 | |ontology_enrichment_uberon=UBERON:0007625!8.56e-08!11;UBERON:0005631!3.86e-07!14;UBERON:0000158!3.86e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.78e-08;3!UBERON:0001775;1.78e-08;3!UBERON:0001529;9.12e-07;2!UBERON:0007204;9.12e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001778;1.78e-08;3!UBERON:0001775;1.78e-08;3!UBERON:0001529;9.12e-07;2!UBERON:0007204;9.12e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.34e-08,3;UBERON:0001775,1.34e-08,3;UBERON:0001637,3.47e-07,42;UBERON:0003509,3.47e-07,42;UBERON:0004572,3.47e-07,42;UBERON:0010188,4.56e-07,6;UBERON:0002539,4.56e-07,6;UBERON:0008816,4.56e-07,6;UBERON:0004573,6.91e-07,33;UBERON:0004571,6.91e-07,33;UBERON:0001529,7.46e-07,2;UBERON:0007204,7.46e-07,2 | |||
|phase1_expression=0.363356758541113,3.21150785836475,0.845726424575827,2.00146596706261,0,0.872338524100369,0,0,0,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,5.3786011716142,1.20538905604795,4.38186054232424,0.975865597581014,0.123121058076788,0,0,0,0.410623275218653,2.00868223351684,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,1.22895262313288,1.99556457716308,1.14185221401064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,3.24056779152704,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,1.98788780678127,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,0,1.97334038733728,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0.438977620880838,1.5324389789951,0.150238058906597,1.02088964844019,0.179389635688862,0.213557388818567,1.05965950579781,0.900273288253207,0.515262646192195,1.03056216018252,0.37223371266318,0.168776332241266,0.876933046450788,1.00973509697646,0.184099797284599,0,0.355009592516614,1.20902517873168,0.169560592310488,0,0.545492241181669,0,0.365921118388786,0.265059536642971,0.116193942869518,0.414644220061482,0.756962552626885,0,0,1.92972281457866,0,0,0,0.828147600278907,0.168584690078102,0,0.55146986366197,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.857839051492628,0.548751427043128,0,0,0,0,0,1.44331342025273,0.579652024875384,0.939269553886573,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0,0,0,1.87467667973554,1.00789276919316,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.22001485746285,0.646358578788889,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,2.61460037580088,4.29883862082845,0,0,0,1.19812427745791,0,0,1.01346914667305,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.45579603071565,2.67643483195743,0.630809660135739,0.468565659970853,0,2.27407504055985,0,0.664225598535437,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.907170879989041,1.24053903909388,0.920771839728375,2.80660094433074,0.512556597022804,0.511707249066704,1.60853921143608,0,0.771048469013278,0.887808626565635,0.0821271560138091,0,0,0.120859449591622,1.80455823272956,0.0920809889358963,0.34444334449382,0.728364672026868,0.262248829918848,0,1.23224539367064,0,0,0.844413031143006,0,0.170093705276516,1.0795795805107,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,1.15314040419064,0,0,0,0.62962469366128,0,0,0,0,1.48259375283136,7.29936922384155,0.744316738719335,0,0.571890581771475,0,0,0,2.35484592059769,0.179872457583315,0,0.235624804691373,0.404364963146632,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,0,0,0.551365343546124,2.65375590096488,3.94605796728386,0,0,0.811641507850816,1.8589409885985,0.845086807596724,0.143411352204052,0.491245205065606,0.7133421029625,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0.890894042497916,0.614321404198464,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0.511343412510774,0,2.48831670129446,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0,0.262379999988587,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0.807818799687949,0.760531603454056,0.957003479195758,0.732780747214898,3.73124343213044,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0.694238953340524,0,0,0.52418000472609,0.51595809741485,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0,0.274083849293502,0.397429223405979,0,0.195551382734803,0.160317640503067,0.213452994739353,0,0,0.114536596165916,0,0,0,0.235694034616795,0.135904206073614,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0,0.575745591958336,0,0,0,0.542999601753713,0.864221491201268,0,1.19730191562487,0.082092520749339,0,0.339936274560377,0.146552233678082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| ||
|short_description=p20@TPM1 | |short_description=p20@TPM1 | ||
}} | }} |
Latest revision as of 11:45, 18 September 2015
Short description: | p20@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TPM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000561242_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.34e-08 | 3 |
ciliated epithelial cell | 1.34e-08 | 3 |
multi-ciliated epithelial cell | 1.34e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.34e-08 | 3 |
vascular associated smooth muscle cell | 4.30e-07 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 7.46e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.34e-08 | 3 |
ciliary body | 1.34e-08 | 3 |
artery | 3.47e-07 | 42 |
arterial blood vessel | 3.47e-07 | 42 |
arterial system | 3.47e-07 | 42 |
protuberance | 4.56e-07 | 6 |
pharyngeal arch | 4.56e-07 | 6 |
embryonic head | 4.56e-07 | 6 |
systemic artery | 6.91e-07 | 33 |
systemic arterial system | 6.91e-07 | 33 |
brachiocephalic artery | 7.46e-07 | 2 |
brachiocephalic vasculature | 7.46e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.43e-08 | 14 |