FFCP PHASE1:Hg19::chr12:129308335..129308346,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000376744_5end | |association_with_transcript=-11bp_to_ENST00000376744_5end | ||
|cluster_id=chr12:129308335..129308346,- | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_5_at_SLC15A4_5end | |description=CAGE_peak_5_at_SLC15A4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.47e-44;3!CL:0000623;9.52e-20;3!CL:0000451;1.56e-12;10!CL:0000771;1.49e-08;2!CL:0000047;2.23e-08;2!CL:0000094;4.42e-08;8 | |ontology_enrichment_celltype_v019=CL:0000784;4.47e-44;3!CL:0000623;9.52e-20;3!CL:0000451;1.56e-12;10!CL:0000771;1.49e-08;2!CL:0000047;2.23e-08;2!CL:0000094;4.42e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.49e-44,3;CL:0000623,7.88e-20,3;CL:0000825,7.88e-20,3;CL:0000451,1.56e-12,10;CL:0000771,1.50e-08,2;CL:0000094,4.50e-08,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,0.393364276848904,0.767658796194425,1.08371286321253,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0,0,0,0.598390972864896,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,11.9245312152671,9.15191857248205,14.1153850505235,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0.571652865261156,0.224262168690721,0,0,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0.788123040807709,1.07813787429759,1.54011643535698,0.254094624222463,1.30139853857622,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0,0,0.280660094433074,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.392996164052485,0,0,0.211107635297664,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0.77380195455795,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0,1.14241563650639,0,0,0,0,0,0.400027764663154,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0.265729680626726,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.385375350578757,0,0.159633859057151,0,0,0.345786262321089,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0.611923411718232,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,0.393364276848904,0.767658796194425,1.08371286321253,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0,0,0,0.598390972864896,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,11.9245312152671,9.15191857248205,14.1153850505235,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0.571652865261156,0.224262168690721,0,0,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0.788123040807709,1.07813787429759,1.54011643535698,0.254094624222463,1.30139853857622,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0,0,0.280660094433074,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.392996164052485,0,0,0.211107635297664,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0.77380195455795,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0,1.14241563650639,0,0,0,0,0,0.400027764663154,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0.265729680626726,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.385375350578757,0,0.159633859057151,0,0,0.345786262321089,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0.611923411718232,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SLC15A4 | |short_description=p5@SLC15A4 | ||
}} | }} |
Latest revision as of 07:43, 17 September 2015
Short description: | p5@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC15A4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -11bp_to_ENST00000376744_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.49e-44 | 3 |
natural killer cell | 7.88e-20 | 3 |
pro-NK cell | 7.88e-20 | 3 |
dendritic cell | 1.56e-12 | 10 |
eosinophil | 1.50e-08 | 2 |
granulocyte | 4.50e-08 | 8 |