FFCP PHASE1:Hg19::chr6:42981651..42981695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4201 | |EntrezGene=4201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6986 | |HGNC=6986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010jyc.1_5end | |association_with_transcript=0bp_to_uc010jyc.1_5end | ||
|cluster_id=chr6:42981651..42981695,- | |||
|description=CAGE_peak_1_at_MEA1_5end | |description=CAGE_peak_1_at_MEA1_5end | ||
|id=chr6:42981651..42981695,- | |id=chr6:42981651..42981695,- | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-19!180;CL:0000222!6.71e-13!119;CL:0000183!8.05e-13!59;CL:0000192!4.82e-12!42;CL:0000514!4.82e-12!42;CL:0000680!5.52e-11!57;CL:0000056!5.52e-11!57;CL:0000355!5.52e-11!57;CL:0000187!9.40e-11!54;CL:0000393!1.18e-10!60;CL:0000211!1.18e-10!60;CL:0000359!2.05e-10!32;CL:0002321!9.17e-10!248;CL:0000220!1.15e-09!246 | |ontology_enrichment_celltype=CL:0000055!1.66e-19!180;CL:0000222!6.71e-13!119;CL:0000183!8.05e-13!59;CL:0000192!4.82e-12!42;CL:0000514!4.82e-12!42;CL:0000680!5.52e-11!57;CL:0000056!5.52e-11!57;CL:0000355!5.52e-11!57;CL:0000187!9.40e-11!54;CL:0000393!1.18e-10!60;CL:0000211!1.18e-10!60;CL:0000359!2.05e-10!32;CL:0002321!9.17e-10!248;CL:0000220!1.15e-09!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.36e-10;32!CL:0000192;7.23e-09;43 | |ontology_enrichment_celltype_v019=CL:0000359;7.36e-10;32!CL:0000192;7.23e-09;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.41e-13,121;CL:0000192,6.35e-12,43;CL:0000514,6.35e-12,43;CL:0000680,6.33e-11,58;CL:0000056,6.33e-11,58;CL:0000355,6.33e-11,58;CL:0000187,1.09e-10,55;CL:0000393,1.32e-10,61;CL:0000211,1.32e-10,61;CL:0000359,2.05e-10,32;CL:0002321,5.11e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;7.23e-09;43 | |ontology_enrichment_development_v019=CL:0000514;7.23e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!7.31e-12!82;UBERON:0004290!8.40e-12!70;UBERON:0000914!1.01e-11!83;UBERON:0002329!1.01e-11!83;UBERON:0003077!1.01e-11!83;UBERON:0003059!1.01e-11!83;UBERON:0007282!1.01e-11!83;UBERON:0009618!1.01e-11!83;UBERON:0007285!1.01e-11!83;UBERON:0001637!1.69e-10!42;UBERON:0003509!1.69e-10!42;UBERON:0004572!1.69e-10!42;UBERON:0001134!2.80e-10!61;UBERON:0002036!2.80e-10!61;UBERON:0003082!2.80e-10!61;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0005256!3.22e-09!143;UBERON:0004872!5.22e-09!84;UBERON:0002049!1.38e-08!79;UBERON:0007798!1.38e-08!79;UBERON:0001981!2.87e-08!60;UBERON:0007500!2.87e-08!60;UBERON:0004537!2.87e-08!60;UBERON:0006965!2.87e-08!60;UBERON:0004573!3.19e-08!33;UBERON:0004571!3.19e-08!33;UBERON:0000475!7.58e-08!365;UBERON:0003104!1.51e-07!238;UBERON:0009142!1.51e-07!238;UBERON:0000055!2.14e-07!69;UBERON:0000481!2.45e-07!347;UBERON:0002100!2.62e-07!216;UBERON:0000119!3.23e-07!312;UBERON:0000468!5.76e-07!659;UBERON:0000483!6.16e-07!309 | |ontology_enrichment_uberon=UBERON:0000486!7.31e-12!82;UBERON:0004290!8.40e-12!70;UBERON:0000914!1.01e-11!83;UBERON:0002329!1.01e-11!83;UBERON:0003077!1.01e-11!83;UBERON:0003059!1.01e-11!83;UBERON:0007282!1.01e-11!83;UBERON:0009618!1.01e-11!83;UBERON:0007285!1.01e-11!83;UBERON:0001637!1.69e-10!42;UBERON:0003509!1.69e-10!42;UBERON:0004572!1.69e-10!42;UBERON:0001134!2.80e-10!61;UBERON:0002036!2.80e-10!61;UBERON:0003082!2.80e-10!61;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0005256!3.22e-09!143;UBERON:0004872!5.22e-09!84;UBERON:0002049!1.38e-08!79;UBERON:0007798!1.38e-08!79;UBERON:0001981!2.87e-08!60;UBERON:0007500!2.87e-08!60;UBERON:0004537!2.87e-08!60;UBERON:0006965!2.87e-08!60;UBERON:0004573!3.19e-08!33;UBERON:0004571!3.19e-08!33;UBERON:0000475!7.58e-08!365;UBERON:0003104!1.51e-07!238;UBERON:0009142!1.51e-07!238;UBERON:0000055!2.14e-07!69;UBERON:0000481!2.45e-07!347;UBERON:0002100!2.62e-07!216;UBERON:0000119!3.23e-07!312;UBERON:0000468!5.76e-07!659;UBERON:0000483!6.16e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.25e-07;33!UBERON:0004571;3.25e-07;33!UBERON:0001637;3.39e-07;42!UBERON:0003509;3.39e-07;42!UBERON:0004572;3.39e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;3.25e-07;33!UBERON:0004571;3.25e-07;33!UBERON:0001637;3.39e-07;42!UBERON:0003509;3.39e-07;42!UBERON:0004572;3.39e-07;42 | ||
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| ||
|short_description=p1@MEA1 | |short_description=p1@MEA1 | ||
}} | }} |
Latest revision as of 21:09, 18 September 2015
Short description: | p1@MEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010jyc.1_5end |
EntrezGene: | MEA1 |
HGNC: | 6986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.41e-13 | 121 |
smooth muscle cell | 6.35e-12 | 43 |
smooth muscle myoblast | 6.35e-12 | 43 |
muscle precursor cell | 6.33e-11 | 58 |
myoblast | 6.33e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-11 | 58 |
muscle cell | 1.09e-10 | 55 |
electrically responsive cell | 1.32e-10 | 61 |
electrically active cell | 1.32e-10 | 61 |
vascular associated smooth muscle cell | 2.05e-10 | 32 |
embryonic cell | 5.11e-10 | 250 |