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FFCP PHASE1:Hg19::chr3:109049145..109049147,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=55211
|EntrezGene=55211
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=19200
|HGNC=19200
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=459bp_to_ENST00000475135_5end
|association_with_transcript=459bp_to_ENST00000475135_5end
|cluster_id=chr3:109049145..109049147,-
|coexpression_cluster_id=C49
|coexpression_cluster_id=C49
|description=CAGE_peak_5_at_DPPA4_5end
|description=CAGE_peak_5_at_DPPA4_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002322!1.17e-53!5;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000047!1.18e-12!8;CL:0000147!1.77e-12!14;CL:0000342!1.07e-11!1;CL:0002565!1.07e-11!1;CL:0000148!2.49e-10!10;CL:0000541!2.49e-10!10
|ontology_enrichment_celltype=CL:0002322!1.17e-53!5;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000047!1.18e-12!8;CL:0000147!1.77e-12!14;CL:0000342!1.07e-11!1;CL:0002565!1.07e-11!1;CL:0000148!2.49e-10!10;CL:0000541!2.49e-10!10
|ontology_enrichment_celltype_v019=CL:0002322;5.22e-140;5!CL:0002321;3.54e-47;15!CL:0000148;3.92e-26;10!CL:0000540;8.63e-20;6!CL:0000404;8.63e-20;6!CL:0000147;6.48e-19;14!CL:0000710;1.77e-13;20!CL:0000075;3.58e-10;27!CL:0002077;7.23e-08;34
|ontology_enrichment_celltype_v019=CL:0002322;5.22e-140;5!CL:0002321;3.54e-47;15!CL:0000148;3.92e-26;10!CL:0000540;8.63e-20;6!CL:0000404;8.63e-20;6!CL:0000147;6.48e-19;14!CL:0000710;1.77e-13;20!CL:0000075;3.58e-10;27!CL:0002077;7.23e-08;34
|ontology_enrichment_celltype_v019_2=CL:0002322,5.23e-140,5;CL:0000148,3.60e-26,10;CL:0000541,3.60e-26,10;CL:0000540,8.63e-20,6;CL:0000031,8.63e-20,6;CL:0000404,8.63e-20,6;CL:0000147,6.09e-19,14;CL:0000047,4.07e-15,8;CL:0000710,1.69e-13,20;CL:0000133,5.93e-12,59;CL:0000075,3.47e-10,27;CL:0000221,6.56e-10,72;CL:0002077,3.16e-08,34
|ontology_enrichment_development_v019=CL:0000031;8.63e-20;6!CL:0000133;3.72e-08;59
|ontology_enrichment_development_v019=CL:0000031;8.63e-20;6!CL:0000133;3.72e-08;59
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!9.68e-14!7;UBERON:0002506!1.07e-11!1;UBERON:0001769!1.07e-11!1;UBERON:0002370!3.07e-11!4;UBERON:0005058!3.07e-11!4;UBERON:0009113!3.07e-11!4;UBERON:0003295!3.07e-11!4;UBERON:0005562!3.07e-11!4;UBERON:0003351!8.71e-08!6
|ontology_enrichment_uberon=UBERON:0004177!9.68e-14!7;UBERON:0002506!1.07e-11!1;UBERON:0001769!1.07e-11!1;UBERON:0002370!3.07e-11!4;UBERON:0005058!3.07e-11!4;UBERON:0009113!3.07e-11!4;UBERON:0003295!3.07e-11!4;UBERON:0005562!3.07e-11!4;UBERON:0003351!8.71e-08!6
|ontology_enrichment_uberon_v019=UBERON:0000922;1.71e-08;49
|ontology_enrichment_uberon_v019=UBERON:0000922;1.71e-08;49
|ontology_enrichment_uberon_v019_2=
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|short_description=p5@DPPA4
|short_description=p5@DPPA4
}}
}}

Latest revision as of 11:52, 19 September 2015

Short description:p5@DPPA4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_DPPA4_5end
Coexpression cluster:C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma
Association with transcript: 459bp_to_ENST00000475135_5end
EntrezGene:DPPA4
HGNC: 19200
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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