FFCP PHASE1:Hg19::chr21:47424854..47424881,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:47424854..47424881,+
|short_description=p@chr21:47424854..47424881,+
|description=CAGE_peak_at_chr21:47424854..47424881,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47424854..47424881,+ | |||
|coexpression_cluster_id=C2637 | |||
|description=CAGE_peak_at_chr21:47424854..47424881,+ | |||
|id=chr21:47424854..47424881,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.85e-31!180;CL:0000057!4.14e-16!75;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0002620!6.86e-11!23;CL:0000393!7.57e-11!60;CL:0000211!7.57e-11!60;CL:0000187!3.11e-10!54;CL:0000183!5.56e-10!59;CL:0000499!2.31e-07!27;CL:0000192!2.45e-07!42;CL:0000514!2.45e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.46e-10;23!CL:0000499;5.25e-09;28!CL:0002570;3.63e-08;8!CL:0000057;2.49e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-16,76;CL:0002620,2.84e-10,23;CL:0000499,4.70e-09,28;CL:0000048,1.47e-08,427;CL:0002570,2.24e-08,8;CL:0000723,4.17e-08,433;CL:0000034,1.58e-07,441;CL:0000680,1.67e-07,58;CL:0000056,1.67e-07,58;CL:0000355,1.67e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.84e-12!70;UBERON:0000475!4.11e-12!365;UBERON:0000914!2.32e-11!83;UBERON:0002329!2.32e-11!83;UBERON:0003077!2.32e-11!83;UBERON:0003059!2.32e-11!83;UBERON:0007282!2.32e-11!83;UBERON:0009618!2.32e-11!83;UBERON:0007285!2.32e-11!83;UBERON:0000486!5.73e-11!82;UBERON:0002385!1.16e-10!63;UBERON:0001015!1.16e-10!63;UBERON:0000383!1.16e-10!63;UBERON:0001134!2.53e-10!61;UBERON:0002036!2.53e-10!61;UBERON:0003082!2.53e-10!61;UBERON:0005256!3.60e-08!143;UBERON:0002199!7.18e-08!45;UBERON:0002416!7.18e-08!45;UBERON:0002097!1.58e-07!40;UBERON:0002100!4.14e-07!216;UBERON:0000481!7.96e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.08e-09;9!UBERON:0000042;5.08e-09;9!UBERON:0004905;9.63e-08;8!UBERON:0000982;9.63e-08;8!UBERON:0004770;9.63e-08;8!UBERON:0002199;9.83e-07;46!UBERON:0002416;9.83e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.37e-09,160;UBERON:0009142,1.37e-09,160;UBERON:0007524,1.16e-08,73;UBERON:0002329,1.95e-08,71;UBERON:0003059,1.95e-08,71;UBERON:0007282,1.95e-08,71;UBERON:0004290,1.95e-08,71;UBERON:0009618,1.95e-08,71;UBERON:0003077,3.24e-08,72;UBERON:0007285,3.24e-08,72;UBERON:0000486,3.93e-08,83;UBERON:0002199,4.05e-08,46;UBERON:0002416,4.05e-08,46;UBERON:0005256,6.86e-08,122;UBERON:0002097,1.15e-07,41;UBERON:0004905,1.36e-07,8;UBERON:0000982,1.36e-07,8;UBERON:0004770,1.36e-07,8;UBERON:0007503,5.08e-07,78;UBERON:0004573,6.10e-07,33;UBERON:0004571,6.10e-07,33 | |||
|phase1_expression=0.181678379270557,1.07050261945492,7.47058341708647,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0,2.47532705920093,0.331397375727916,2.6893005858071,1.20538905604795,0,1.95173119516203,5.17108443922509,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,43.0112591337634,4.51204119572301,2.02785126545153,0.795285947051099,0.973269740605272,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.8994576749687,1.72131935057184,8.89193524321323,1.41867352879343,2.24271040056923,3.20246987189115,0.24666754841716,0,0,0.163461903113459,15.8925299027178,1.72852777344,0.468642863667593,1.24864030732128,1.71141546463335,2.09228152772521,0.23486899728753,0.161872944368132,0.421352420106746,1.22492502752936,0.491337269247072,0.103325781175765,0,1.23633464639278,0,0,0.505008341862199,0,0,0.877955241761676,0,0.600952235626387,0,8.79009214875424,10.8914268297469,14.4113692788502,4.50136644126603,0.824420233907511,3.09168648054755,5.3973888336161,5.23206629947925,0.68205903612839,4.03894038790583,16.4769318569716,0.80823028409406,5.32514388774922,0.10075209822764,4.57813599238317,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0,0,4.69348596989448,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.224262168690721,0,0.22001485746285,2.32689088364,17.8828222925941,5.917119267892,1.86156681609409,0,2.05765899409714,0,0,2.00169191121407,16.2786481617433,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0,0,0,0,5.99062138728957,2.29723871668228,4.27910715122155,2.60606352001643,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,5.39842563564216,2.00068208423871,1.08506009479894,2.07970861530807,0.713715955188647,0.630809660135739,1.17141414992713,1.80567659836631,0,0,3.98535359121262,0.368738337083406,5.64743494042539,22.3213319507524,3.0882908142977,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,10.5074102389675,3.07024349440022,1.12597744800525,0,3.08419387605311,1.9531789784444,4.92762936082855,0.519254429183621,1.74315567689939,0,0,0,3.09999010044438,2.00300284807389,1.04899531967539,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.495056999523528,0,0,1.6068392984416,4.44685304143761,0.462145851343933,0.767518373630648,0.551346289938122,1.39646318328756,0.145016693914229,0.170453254832202,4.71869788927708,0,0,0,0,0.464845549297286,13.2221185668869,0,3.38836938193698,1.06461206063404,3.47973196830029,7.04232032594896,0.143124886741991,0.744316738719335,2.53103539774981,0,0.767693373934002,0.855877976067841,2.86382923133343,0,1.61885211824983,0.823611089208164,0.235624804691373,1.61745985258653,0,0,0.975267478179181,0.487426979262569,1.05650146756755,12.2849920267187,1.27264888758341,0,4.96228809191512,0,0.876901770507525,0,0.655894752046633,0.405820753925408,0,0.563391205064483,0.286822704408103,0,0.35667105148125,1.77380532035299,1.05553817648832,1.97576935775941,1.89736586882858,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.984685914873589,0.111308705022906,0,1.05562704063997,0.597743964753209,0.552567831062295,0,0,0,5.90975216557434,0,0,0,1.08507746200627,0,0,0,0.185536196323703,1.99613798001194,0,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0.241192877250816,1.52581736317083,1.43753037910592,0,0.219385397153973,0,0,2.23155749661011,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,1.18375320854817,2.41981432097328,0,0.821425535170343,0,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0.138674673013139,0,0,0,0.698906672968121,5.84752510403496,0,0,0,0.581934098930517,0.0882561266915003,1.12990370390266,0,0,0.126621591911757,0.782205530939212,0.0801588202515337,0.213452994739353,0.39961921916426,0.144090417154106,0,0,0,0.124252535565433,0,1.08723364858891,0.523014231561666,0.101998217636322,1.44475294950759,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0.223171457441873,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| ||
|short_description=p@chr21:47424854..47424881,+ | |||
}} | }} |
Latest revision as of 18:45, 28 July 2015
Short description: | p@chr21:47424854..47424881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47424854..47424881, + |
Coexpression cluster: | C2637_Chondrocyte_Pericytes_Mesenchymal_Fibroblast_Cardiac_Smooth_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-16 | 76 |
skin fibroblast | 2.84e-10 | 23 |
stromal cell | 4.70e-09 | 28 |
multi fate stem cell | 1.47e-08 | 427 |
mesenchymal stem cell of adipose | 2.24e-08 | 8 |
somatic stem cell | 4.17e-08 | 433 |
stem cell | 1.58e-07 | 441 |
muscle precursor cell | 1.67e-07 | 58 |
myoblast | 1.67e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.37e-09 | 160 |
entire embryonic mesenchyme | 1.37e-09 | 160 |
dense mesenchyme tissue | 1.16e-08 | 73 |
somite | 1.95e-08 | 71 |
presomitic mesoderm | 1.95e-08 | 71 |
presumptive segmental plate | 1.95e-08 | 71 |
dermomyotome | 1.95e-08 | 71 |
trunk paraxial mesoderm | 1.95e-08 | 71 |
paraxial mesoderm | 3.24e-08 | 72 |
presumptive paraxial mesoderm | 3.24e-08 | 72 |
multilaminar epithelium | 3.93e-08 | 83 |
integument | 4.05e-08 | 46 |
integumental system | 4.05e-08 | 46 |
trunk mesenchyme | 6.86e-08 | 122 |
skin of body | 1.15e-07 | 41 |
articulation | 1.36e-07 | 8 |
skeletal joint | 1.36e-07 | 8 |
articular system | 1.36e-07 | 8 |
epithelial vesicle | 5.08e-07 | 78 |
systemic artery | 6.10e-07 | 33 |
systemic arterial system | 6.10e-07 | 33 |