FFCP PHASE1:Hg19::chr13:24553933..24553949,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439928_5end | |association_with_transcript=0bp_to_ENST00000439928_5end | ||
|cluster_id=chr13:24553933..24553949,+ | |||
|description=CAGE_peak_1_at_ENST00000439928_5end | |description=CAGE_peak_1_at_ENST00000439928_5end | ||
|id=chr13:24553933..24553949,+ | |id=chr13:24553933..24553949,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.63e-09!180 | |ontology_enrichment_celltype=CL:0000055!3.63e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.42e-20;5!CL:0000163;5.49e-11;9 | |ontology_enrichment_celltype_v019=CL:0000097;4.42e-20;5!CL:0000163;5.49e-11;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.61e-20,5;CL:0002028,4.61e-20,5;CL:0000163,5.61e-11,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.52e-09!14 | |ontology_enrichment_disease=DOID:2394!4.52e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.35e-12;14!DOID:120;9.74e-08;27!DOID:193;4.12e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;1.35e-12;14!DOID:120;9.74e-08;27!DOID:193;4.12e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.38e-12,14;DOID:120,8.23e-08,27;DOID:193,3.53e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.38e-13!82;UBERON:0002616!2.25e-13!59;UBERON:0001049!3.83e-13!57;UBERON:0005068!3.83e-13!57;UBERON:0006241!3.83e-13!57;UBERON:0007135!3.83e-13!57;UBERON:0000955!8.27e-13!69;UBERON:0006238!8.27e-13!69;UBERON:0005743!9.94e-13!86;UBERON:0003075!2.89e-11!86;UBERON:0007284!2.89e-11!86;UBERON:0000073!3.91e-11!94;UBERON:0001016!3.91e-11!94;UBERON:0002346!4.28e-10!90;UBERON:0002780!6.88e-08!41;UBERON:0001890!6.88e-08!41;UBERON:0006240!6.88e-08!41;UBERON:0003076!8.46e-08!15;UBERON:0003057!8.46e-08!15;UBERON:0007023!1.16e-07!115;UBERON:0000033!1.61e-07!123;UBERON:0003080!1.62e-07!42;UBERON:0000475!1.77e-07!365;UBERON:0000153!2.13e-07!129;UBERON:0007811!2.13e-07!129;UBERON:0000025!3.82e-07!194;UBERON:0002020!8.25e-07!34;UBERON:0003528!8.25e-07!34;UBERON:0001893!8.35e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!1.38e-13!82;UBERON:0002616!2.25e-13!59;UBERON:0001049!3.83e-13!57;UBERON:0005068!3.83e-13!57;UBERON:0006241!3.83e-13!57;UBERON:0007135!3.83e-13!57;UBERON:0000955!8.27e-13!69;UBERON:0006238!8.27e-13!69;UBERON:0005743!9.94e-13!86;UBERON:0003075!2.89e-11!86;UBERON:0007284!2.89e-11!86;UBERON:0000073!3.91e-11!94;UBERON:0001016!3.91e-11!94;UBERON:0002346!4.28e-10!90;UBERON:0002780!6.88e-08!41;UBERON:0001890!6.88e-08!41;UBERON:0006240!6.88e-08!41;UBERON:0003076!8.46e-08!15;UBERON:0003057!8.46e-08!15;UBERON:0007023!1.16e-07!115;UBERON:0000033!1.61e-07!123;UBERON:0003080!1.62e-07!42;UBERON:0000475!1.77e-07!365;UBERON:0000153!2.13e-07!129;UBERON:0007811!2.13e-07!129;UBERON:0000025!3.82e-07!194;UBERON:0002020!8.25e-07!34;UBERON:0003528!8.25e-07!34;UBERON:0001893!8.35e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.47e-08;2!UBERON:0002118;1.04e-07;5!UBERON:0000992;2.87e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0000007;4.47e-08;2!UBERON:0002118;1.04e-07;5!UBERON:0000992;2.87e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.58e-08,2;UBERON:0002118,1.07e-07,5;UBERON:0000992,3.57e-07,13 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,1.46062018077475,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.472674085820339,0.221729397462564,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,1.05927344650575,0.286836620748814,0,0.560677600142307,2.1349799145941,1.72667283892012,0,0.404132016209064,0,0.605429710579726,1.15235184896,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.919463387397059,0.45071417671979,0,0.358779271377724,0.427114777637135,0,0.600182192168805,0.515262646192195,1.28820270022815,0.18611685633159,0.168776332241266,0,0.757301322732344,0.460249493211497,0.323292113637624,2.13005755509969,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,5.41929561685538,3.52193736052904,5.80518723514162,5.04419836959365,6.18587923789262,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,6.85140093516222,0,0,0.797814349754612,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,1.74306691720059,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.537182889719687,0,0.985153801009636,0.431255149719035,1.15508732651774,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0,0,0.537101224341368,0.145016693914229,0,0.890320356467374,0,0,0,0,0,0,0,0,1.06461206063404,0,0.18532421910392,0.858749320451947,0.372158369359667,0,1.33441135746677,0,0,0,1.56989728039846,0,0.823611089208164,0.353437207037059,0.606547444719948,0,0.842516912477962,0.975267478179181,0.487426979262569,0,0.818999468447914,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0.329607748453519,0,0.398495976502139,0,1.76352923497993,0.409074730008619,0,1.55519793830904,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0.591095237907095,0.219385397153973,0,0,0.384751292518985,1.02547850262301,0.23056390438806,0,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,3.26173241548684,1.35920332841153,1.25306339406546,3.16785325009182,0,0.702793337176017,0,0,0,0.394584402849391,0,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0.288950589901519,0,1.09524303113594,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.630445658393585,1.62609223218494,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,1.0342636508924,0.79339561045614,0,0,0.533937062838473,1.41483874589699,0.828478110694391,0,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0,1.72022758707021,0.776503360757966,1.24192805882767,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0,0.302461847526478,0.777186002913902,1.33069634990671,0.63718706865481,6.29724357029046,1.08684069813382,0.414706207840855,0.797525143673985,3.65221543268214,1.6528336989694,0.761610424337591,0,3.27327586564607,2.04080058380728,0.464033759878494,6.36953421917786,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.1437183414724,0.578063025868136,0,0.478901577171454,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.376051641746286,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,1.13831095675649,0.0887023701626388,0,0.171488009437418,0.475788130837822,0.328863867814245,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0.4582137370881,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0.297046400327086,1.6906229103336,0,0.281951753939561,1.22469987149797,0.199882311849858,0,0,0,0,0,1.29005624836306,0,0.271965960763659,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0,0,1.24119595034274,0.426467963801962,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,1.00411087549747,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,1.46062018077475,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.472674085820339,0.221729397462564,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,1.05927344650575,0.286836620748814,0,0.560677600142307,2.1349799145941,1.72667283892012,0,0.404132016209064,0,0.605429710579726,1.15235184896,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.919463387397059,0.45071417671979,0,0.358779271377724,0.427114777637135,0,0.600182192168805,0.515262646192195,1.28820270022815,0.18611685633159,0.168776332241266,0,0.757301322732344,0.460249493211497,0.323292113637624,2.13005755509969,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,5.41929561685538,3.52193736052904,5.80518723514162,5.04419836959365,6.18587923789262,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,6.85140093516222,0,0,0.797814349754612,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,1.74306691720059,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.537182889719687,0,0.985153801009636,0.431255149719035,1.15508732651774,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0,0,0.537101224341368,0.145016693914229,0,0.890320356467374,0,0,0,0,0,0,0,0,1.06461206063404,0,0.18532421910392,0.858749320451947,0.372158369359667,0,1.33441135746677,0,0,0,1.56989728039846,0,0.823611089208164,0.353437207037059,0.606547444719948,0,0.842516912477962,0.975267478179181,0.487426979262569,0,0.818999468447914,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0.329607748453519,0,0.398495976502139,0,1.76352923497993,0.409074730008619,0,1.55519793830904,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0.591095237907095,0.219385397153973,0,0,0.384751292518985,1.02547850262301,0.23056390438806,0,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,3.26173241548684,1.35920332841153,1.25306339406546,3.16785325009182,0,0.702793337176017,0,0,0,0.394584402849391,0,0.30607276163049,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0.288950589901519,0,1.09524303113594,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.630445658393585,1.62609223218494,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,1.0342636508924,0.79339561045614,0,0,0.533937062838473,1.41483874589699,0.828478110694391,0,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0,1.72022758707021,0.776503360757966,1.24192805882767,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0,0.302461847526478,0.777186002913902,1.33069634990671,0.63718706865481,6.29724357029046,1.08684069813382,0.414706207840855,0.797525143673985,3.65221543268214,1.6528336989694,0.761610424337591,0,3.27327586564607,2.04080058380728,0.464033759878494,6.36953421917786,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.1437183414724,0.578063025868136,0,0.478901577171454,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.376051641746286,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,1.13831095675649,0.0887023701626388,0,0.171488009437418,0.475788130837822,0.328863867814245,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0.4582137370881,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0.297046400327086,1.6906229103336,0,0.281951753939561,1.22469987149797,0.199882311849858,0,0,0,0,0,1.29005624836306,0,0.271965960763659,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0,0,1.24119595034274,0.426467963801962,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,1.00411087549747,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p1@ENST00000439928 | |short_description=p1@ENST00000439928 | ||
}} | }} |
Latest revision as of 15:09, 24 July 2015
Short description: | p1@ENST00000439928 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000439928_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439928_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.61e-20 | 5 |
basophil mast progenitor cell | 4.61e-20 | 5 |
endocrine cell | 5.61e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.58e-08 | 2 |
right ovary | 1.07e-07 | 5 |
female gonad | 3.57e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.38e-12 | 14 |
female reproductive organ cancer | 8.23e-08 | 27 |
reproductive organ cancer | 3.53e-07 | 29 |