FFCP PHASE1:Hg19::chr5:83016840..83016851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |EntrezGene=1404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |HGNC=2380 | ||
|TSSclassifier=strong | |||
|UniProt=P10915 | |UniProt=P10915 | ||
|association_with_transcript=44bp_to_NM_001884,uc003kin.2_5end | |association_with_transcript=44bp_to_NM_001884,uc003kin.2_5end | ||
|cluster_id=chr5:83016840..83016851,- | |||
|coexpression_cluster_id=C4525 | |coexpression_cluster_id=C4525 | ||
|description=CAGE_peak_3_at_HAPLN1_5end | |description=CAGE_peak_3_at_HAPLN1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!8.04e-29!180;CL:0000057!1.03e-16!75;CL:0002620!1.32e-10!23;CL:0000062!2.72e-09!11;CL:0000375!2.72e-09!11;CL:0000335!2.72e-09!11;CL:0000359!1.46e-07!32 | |ontology_enrichment_celltype=CL:0000055!8.04e-29!180;CL:0000057!1.03e-16!75;CL:0002620!1.32e-10!23;CL:0000062!2.72e-09!11;CL:0000375!2.72e-09!11;CL:0000335!2.72e-09!11;CL:0000359!1.46e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.13e-15;9!CL:0002620;4.48e-13;23!CL:0000138;6.41e-09;6!CL:0000057;3.89e-08;73!CL:0002573;5.29e-08;2 | |ontology_enrichment_celltype_v019=CL:0000062;3.13e-15;9!CL:0002620;4.48e-13;23!CL:0000138;6.41e-09;6!CL:0000057;3.89e-08;73!CL:0002573;5.29e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.32e-16,76;CL:0000062,2.74e-15,11;CL:0000375,2.74e-15,11;CL:0000335,2.74e-15,11;CL:0002620,3.55e-13,23;CL:0000058,6.37e-09,6;CL:0000138,6.37e-09,6;CL:0002573,5.30e-08,2;CL:0000219,1.85e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000335;2.64e-15;11!UBERON:0005062;3.97e-08;4!UBERON:0007284;3.97e-08;4 | |ontology_enrichment_development_v019=CL:0000335;2.64e-15;11!UBERON:0005062;3.97e-08;4!UBERON:0007284;3.97e-08;4 | ||
|ontology_enrichment_disease=DOID:17!2.04e-07!5;DOID:450!2.04e-07!5;DOID:66!2.04e-07!5;DOID:423!2.04e-07!5;DOID:0080000!2.04e-07!5;DOID:11722!2.04e-07!5 | |ontology_enrichment_disease=DOID:17!2.04e-07!5;DOID:450!2.04e-07!5;DOID:66!2.04e-07!5;DOID:423!2.04e-07!5;DOID:0080000!2.04e-07!5;DOID:11722!2.04e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.41e-11;5!DOID:450;2.41e-11;5!DOID:66;2.41e-11;5!DOID:423;2.41e-11;5!DOID:0080000;2.41e-11;5!DOID:11722;2.41e-11;5 | |ontology_enrichment_disease_v019=DOID:17;2.41e-11;5!DOID:450;2.41e-11;5!DOID:66;2.41e-11;5!DOID:423;2.41e-11;5!DOID:0080000;2.41e-11;5!DOID:11722;2.41e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.83e-11,5;DOID:450,1.83e-11,5;DOID:66,1.83e-11,5;DOID:423,1.83e-11,5;DOID:0080000,1.83e-11,5;DOID:11722,1.83e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.71e-08!84;UBERON:0002097!2.63e-07!40;UBERON:0002049!4.44e-07!79;UBERON:0007798!4.44e-07!79;UBERON:0001009!6.79e-07!113;UBERON:0004535!7.01e-07!110 | |ontology_enrichment_uberon=UBERON:0004872!1.71e-08!84;UBERON:0002097!2.63e-07!40;UBERON:0002049!4.44e-07!79;UBERON:0007798!4.44e-07!79;UBERON:0001009!6.79e-07!113;UBERON:0004535!7.01e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.63e-09;41 | |ontology_enrichment_uberon_v019=UBERON:0002097;9.63e-09;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.91e-11,41;UBERON:0002199,4.34e-09,46;UBERON:0002416,4.34e-09,46 | |||
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| ||
|short_description=p3@HAPLN1 | |short_description=p3@HAPLN1 | ||
}} | }} |
Latest revision as of 01:12, 19 September 2015
Short description: | p3@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAPLN1_5end |
Coexpression cluster: | C4525_Fibroblast_Saos2_Chondrocyte_Preadipocyte_Osteoblast_trachea_pleomorphic |
Association with transcript: | 44bp_to_NM_001884, uc003kin.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | P10915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.32e-16 | 76 |
osteoblast | 2.74e-15 | 11 |
osteoprogenitor cell | 2.74e-15 | 11 |
mesenchyme condensation cell | 2.74e-15 | 11 |
skin fibroblast | 3.55e-13 | 23 |
chondroblast | 6.37e-09 | 6 |
chondrocyte | 6.37e-09 | 6 |
Schwann cell | 5.30e-08 | 2 |
motile cell | 1.85e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.91e-11 | 41 |
integument | 4.34e-09 | 46 |
integumental system | 4.34e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.83e-11 | 5 |
myotonic disease | 1.83e-11 | 5 |
muscle tissue disease | 1.83e-11 | 5 |
myopathy | 1.83e-11 | 5 |
muscular disease | 1.83e-11 | 5 |
myotonic dystrophy | 1.83e-11 | 5 |