FFCP PHASE1:Hg19::chr5:38445641..38445658,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133584 | |EntrezGene=133584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26810 | |HGNC=26810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000397210_5end | |association_with_transcript=0bp_to_ENST00000397210_5end | ||
|cluster_id=chr5:38445641..38445658,+ | |||
|description=CAGE_peak_1_at_EGFLAM_5end | |description=CAGE_peak_1_at_EGFLAM_5end | ||
|id=chr5:38445641..38445658,+ | |id=chr5:38445641..38445658,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.53e-10!180;CL:0000136!2.94e-09!15;CL:0000680!1.26e-08!57;CL:0000056!1.26e-08!57;CL:0000355!1.26e-08!57;CL:0000187!2.07e-07!54;CL:0002334!8.99e-07!12;CL:0000183!9.50e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.53e-10!180;CL:0000136!2.94e-09!15;CL:0000680!1.26e-08!57;CL:0000056!1.26e-08!57;CL:0000355!1.26e-08!57;CL:0000187!2.07e-07!54;CL:0002334!8.99e-07!12;CL:0000183!9.50e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.99e-11;13!CL:0002334;4.80e-08;12 | |ontology_enrichment_celltype_v019=CL:0000136;1.99e-11;13!CL:0002334;4.80e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.65e-11,15;CL:0002334,2.33e-08,12;CL:0000680,8.38e-08,58;CL:0000056,8.38e-08,58;CL:0000355,8.38e-08,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-14!115;UBERON:0000119!5.38e-13!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.37e-11!365;UBERON:0002385!6.56e-11!63;UBERON:0001015!6.56e-11!63;UBERON:0000383!6.56e-11!63;UBERON:0004290!1.10e-10!70;UBERON:0001134!1.37e-10!61;UBERON:0002036!1.37e-10!61;UBERON:0003082!1.37e-10!61;UBERON:0000481!2.51e-10!347;UBERON:0000486!6.74e-10!82;UBERON:0000914!3.95e-09!83;UBERON:0002329!3.95e-09!83;UBERON:0003077!3.95e-09!83;UBERON:0003059!3.95e-09!83;UBERON:0007282!3.95e-09!83;UBERON:0009618!3.95e-09!83;UBERON:0007285!3.95e-09!83;UBERON:0000477!4.69e-09!286;UBERON:0000468!9.23e-09!659;UBERON:0000922!7.39e-08!612;UBERON:0002050!1.08e-07!605;UBERON:0005423!1.08e-07!605;UBERON:0000479!1.39e-07!787;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0000467!4.83e-07!625;UBERON:0000480!6.48e-07!626;UBERON:0004111!6.91e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!2.78e-14!115;UBERON:0000119!5.38e-13!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.37e-11!365;UBERON:0002385!6.56e-11!63;UBERON:0001015!6.56e-11!63;UBERON:0000383!6.56e-11!63;UBERON:0004290!1.10e-10!70;UBERON:0001134!1.37e-10!61;UBERON:0002036!1.37e-10!61;UBERON:0003082!1.37e-10!61;UBERON:0000481!2.51e-10!347;UBERON:0000486!6.74e-10!82;UBERON:0000914!3.95e-09!83;UBERON:0002329!3.95e-09!83;UBERON:0003077!3.95e-09!83;UBERON:0003059!3.95e-09!83;UBERON:0007282!3.95e-09!83;UBERON:0009618!3.95e-09!83;UBERON:0007285!3.95e-09!83;UBERON:0000477!4.69e-09!286;UBERON:0000468!9.23e-09!659;UBERON:0000922!7.39e-08!612;UBERON:0002050!1.08e-07!605;UBERON:0005423!1.08e-07!605;UBERON:0000479!1.39e-07!787;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0000467!4.83e-07!625;UBERON:0000480!6.48e-07!626;UBERON:0004111!6.91e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.75e-09;16!UBERON:0002036;3.75e-09;16!UBERON:0002385;8.85e-08;31!UBERON:0001015;8.85e-08;31!UBERON:0000383;8.85e-08;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.75e-09;16!UBERON:0002036;3.75e-09;16!UBERON:0002385;8.85e-08;31!UBERON:0001015;8.85e-08;31!UBERON:0000383;8.85e-08;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.84e-10,64;UBERON:0001015,4.84e-10,64;UBERON:0000383,4.84e-10,64;UBERON:0001134,4.96e-10,62;UBERON:0002036,4.96e-10,62;UBERON:0003082,4.96e-10,62;UBERON:0007023,4.44e-09,114;UBERON:0002329,9.27e-09,71;UBERON:0003059,9.27e-09,71;UBERON:0007282,9.27e-09,71;UBERON:0004290,9.27e-09,71;UBERON:0009618,9.27e-09,71;UBERON:0003077,1.77e-08,72;UBERON:0007285,1.77e-08,72;UBERON:0007524,3.29e-08,73;UBERON:0000486,8.76e-08,83;UBERON:0005256,9.35e-08,122;UBERON:0007503,5.51e-07,78;UBERON:0003104,5.54e-07,160;UBERON:0009142,5.54e-07,160;UBERON:0002100,7.03e-07,199 | |||
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| ||
|short_description=p1@EGFLAM | |short_description=p1@EGFLAM | ||
}} | }} |
Latest revision as of 20:14, 17 September 2015
Short description: | p1@EGFLAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EGFLAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397210_5end |
EntrezGene: | EGFLAM |
HGNC: | 26810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.65e-11 | 15 |
preadipocyte | 2.33e-08 | 12 |
muscle precursor cell | 8.38e-08 | 58 |
myoblast | 8.38e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.38e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 4.84e-10 | 64 |
musculature | 4.84e-10 | 64 |
musculature of body | 4.84e-10 | 64 |
skeletal muscle tissue | 4.96e-10 | 62 |
striated muscle tissue | 4.96e-10 | 62 |
myotome | 4.96e-10 | 62 |
adult organism | 4.44e-09 | 114 |
somite | 9.27e-09 | 71 |
presomitic mesoderm | 9.27e-09 | 71 |
presumptive segmental plate | 9.27e-09 | 71 |
dermomyotome | 9.27e-09 | 71 |
trunk paraxial mesoderm | 9.27e-09 | 71 |
paraxial mesoderm | 1.77e-08 | 72 |
presumptive paraxial mesoderm | 1.77e-08 | 72 |
dense mesenchyme tissue | 3.29e-08 | 73 |
multilaminar epithelium | 8.76e-08 | 83 |
trunk mesenchyme | 9.35e-08 | 122 |
epithelial vesicle | 5.51e-07 | 78 |
mesenchyme | 5.54e-07 | 160 |
entire embryonic mesenchyme | 5.54e-07 | 160 |
trunk | 7.03e-07 | 199 |