FFCP PHASE1:Hg19::chr6:42141152..42141168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2978 | |EntrezGene=2978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4678 | |HGNC=4678 | ||
|TSSclassifier=strong | |||
|UniProt=P43080 | |UniProt=P43080 | ||
|association_with_transcript=123bp_to_ENST00000372958_5end | |association_with_transcript=123bp_to_ENST00000372958_5end | ||
|cluster_id=chr6:42141152..42141168,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_5_at_GUCA1A_5end | |description=CAGE_peak_5_at_GUCA1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.09e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.09e-14;3 | ||
|ontology_enrichment_disease=DOID:3093!1.42e-07!11 | |ontology_enrichment_disease=DOID:3093!1.42e-07!11 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.89e-41!2;UBERON:0002757!4.89e-41!2;UBERON:0010134!4.89e-41!2;UBERON:0002784!4.89e-41!2;UBERON:0005408!4.89e-41!2;UBERON:0001899!4.89e-41!2;UBERON:0003296!4.23e-21!4;UBERON:0010133!4.23e-21!4;UBERON:0000966!8.14e-17!5;UBERON:0005388!8.14e-17!5;UBERON:0001802!8.14e-17!5;UBERON:0000970!3.02e-16!20;UBERON:0002104!1.71e-15!21;UBERON:0000020!3.49e-14!23;UBERON:0001032!1.31e-13!24;UBERON:0004456!1.31e-13!24;UBERON:0001894!1.68e-12!7;UBERON:0006222!1.68e-12!7;UBERON:0002360!3.02e-11!2;UBERON:0000094!3.02e-11!2;UBERON:0007645!3.02e-11!2;UBERON:0000019!5.18e-10!19;UBERON:0000047!5.18e-10!19;UBERON:0004088!5.18e-10!19;UBERON:0003072!5.18e-10!19;UBERON:0003071!5.18e-10!19;UBERON:0004128!5.18e-10!19;UBERON:0001456!4.08e-09!21;UBERON:0003056!3.78e-08!61;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0005743!4.46e-08!86;UBERON:0002346!8.76e-08!90;UBERON:0000073!2.59e-07!94;UBERON:0001016!2.59e-07!94;UBERON:0005085!9.31e-07!29 | |ontology_enrichment_uberon=UBERON:0001905!4.89e-41!2;UBERON:0002757!4.89e-41!2;UBERON:0010134!4.89e-41!2;UBERON:0002784!4.89e-41!2;UBERON:0005408!4.89e-41!2;UBERON:0001899!4.89e-41!2;UBERON:0003296!4.23e-21!4;UBERON:0010133!4.23e-21!4;UBERON:0000966!8.14e-17!5;UBERON:0005388!8.14e-17!5;UBERON:0001802!8.14e-17!5;UBERON:0000970!3.02e-16!20;UBERON:0002104!1.71e-15!21;UBERON:0000020!3.49e-14!23;UBERON:0001032!1.31e-13!24;UBERON:0004456!1.31e-13!24;UBERON:0001894!1.68e-12!7;UBERON:0006222!1.68e-12!7;UBERON:0002360!3.02e-11!2;UBERON:0000094!3.02e-11!2;UBERON:0007645!3.02e-11!2;UBERON:0000019!5.18e-10!19;UBERON:0000047!5.18e-10!19;UBERON:0004088!5.18e-10!19;UBERON:0003072!5.18e-10!19;UBERON:0003071!5.18e-10!19;UBERON:0004128!5.18e-10!19;UBERON:0001456!4.08e-09!21;UBERON:0003056!3.78e-08!61;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0005743!4.46e-08!86;UBERON:0002346!8.76e-08!90;UBERON:0000073!2.59e-07!94;UBERON:0001016!2.59e-07!94;UBERON:0005085!9.31e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;3.49e-09;5!UBERON:0005388;3.49e-09;5!UBERON:0001802;3.49e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;3.49e-09;5!UBERON:0005388;3.49e-09;5!UBERON:0001802;3.49e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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|short_description=p5@GUCA1A | |short_description=p5@GUCA1A | ||
}} | }} |
Latest revision as of 19:46, 18 September 2015
Short description: | p5@GUCA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GUCA1A_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 123bp_to_ENST00000372958_5end |
EntrezGene: | GUCA1A |
HGNC: | 4678 |
UniProt: | P43080 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |