FFCP PHASE1:Hg19::chr17:80275466..80275501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=924 | |EntrezGene=924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1695 | |HGNC=1695 | ||
|TSSclassifier=strong | |||
|UniProt=P09564,Q29VG3 | |UniProt=P09564,Q29VG3 | ||
|association_with_transcript=0bp_to_ENST00000312648,NM_006137,uc002kel.1,uc002kem.2,uc010din.2,uc010wvk.1_5end | |association_with_transcript=0bp_to_ENST00000312648,NM_006137,uc002kel.1,uc002kem.2,uc010din.2,uc010wvk.1_5end | ||
|cluster_id=chr17:80275466..80275501,- | |||
|coexpression_cluster_id=C2445 | |coexpression_cluster_id=C2445 | ||
|description=CAGE_peak_2_at_CD7_5end | |description=CAGE_peak_2_at_CD7_5end | ||
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|ontology_enrichment_celltype=CL:0000084!1.60e-13!25;CL:0000827!1.60e-13!25;CL:0000791!3.31e-13!18;CL:0000789!3.31e-13!18;CL:0002420!3.31e-13!18;CL:0002419!3.31e-13!18;CL:0000790!3.31e-13!18;CL:0000037!2.89e-09!172;CL:0000566!2.89e-09!172;CL:0000738!6.70e-09!140;CL:0000625!1.30e-08!11;CL:0000988!5.71e-08!182;CL:0002032!8.03e-08!165;CL:0000837!8.03e-08!165;CL:0000542!1.09e-07!53;CL:0000051!1.09e-07!53;CL:0000838!2.33e-07!52;CL:0002087!2.88e-07!119 | |ontology_enrichment_celltype=CL:0000084!1.60e-13!25;CL:0000827!1.60e-13!25;CL:0000791!3.31e-13!18;CL:0000789!3.31e-13!18;CL:0002420!3.31e-13!18;CL:0002419!3.31e-13!18;CL:0000790!3.31e-13!18;CL:0000037!2.89e-09!172;CL:0000566!2.89e-09!172;CL:0000738!6.70e-09!140;CL:0000625!1.30e-08!11;CL:0000988!5.71e-08!182;CL:0002032!8.03e-08!165;CL:0000837!8.03e-08!165;CL:0000542!1.09e-07!53;CL:0000051!1.09e-07!53;CL:0000838!2.33e-07!52;CL:0002087!2.88e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.98e-18;25!CL:0000791;6.32e-17;18!CL:0000789;6.32e-17;18!CL:0002419;6.32e-17;18!CL:0000625;7.24e-11;11!CL:0000624;7.90e-07;6 | |ontology_enrichment_celltype_v019=CL:0000084;4.98e-18;25!CL:0000791;6.32e-17;18!CL:0000789;6.32e-17;18!CL:0002419;6.32e-17;18!CL:0000625;7.24e-11;11!CL:0000624;7.90e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.35e-18,25;CL:0000827,5.35e-18,25;CL:0000791,6.66e-17,18;CL:0000789,6.66e-17,18;CL:0002420,6.66e-17,18;CL:0002419,6.66e-17,18;CL:0000790,6.66e-17,18;CL:0000037,7.26e-11,168;CL:0000625,7.45e-11,11;CL:0000738,4.96e-10,136;CL:0000988,6.09e-10,177;CL:0000542,2.35e-09,53;CL:0000051,2.35e-09,53;CL:0000838,6.27e-09,52;CL:0002032,6.28e-09,161;CL:0000837,6.28e-09,161;CL:0002087,6.58e-08,115;CL:0000624,8.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.32e-17;18 | |ontology_enrichment_development_v019=CL:0000790;6.32e-17;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-07;15!UBERON:0000179;1.10e-07;15!UBERON:0000463;1.10e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-07;15!UBERON:0000179;1.10e-07;15!UBERON:0000463;1.10e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-07,15;UBERON:0000179,1.12e-07,15;UBERON:0000463,1.12e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,1.30592814099919,0,0,0.218441372130172,0,2.59909341216098,3.31397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,31.0757778710634,24.9489108763188,23.8416829906757,0,0,0.739508020333575,0.0774672005803016,0,0,17.7278530730201,20.2549891944843,28.2114131930607,3.13481663935894,9.06902264853143,3.34848237924443,0.436194716338694,1.88937971844405,0.242584061187816,0.232429036905685,0.822335776043652,1.23882548358041,0.575384784644301,1.5369642391746,0,2.06847408441971,1.93645405075148,1.35426486594342,1.12945403725563,2.18324920046277,0.224723484445085,2.14258724659632,2.88836124368484,1.27867425159808,0.659702600373432,0.797854630486527,0,1.7412554317715,3.40431134814684,1.24564449799115,1.50749199154046,1.0429658368404,0.65156653411535,0.605399502633369,3.31449872388808,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,2.93618594685469,1.14681968437569,0,14.5732226375199,1.84368859342554,88.7161063213387,91.5715077205554,100.950336008759,189.087926286857,80.8287221251304,92.7957699240077,91.5685623517183,134.80665283106,52.7344574379959,58.484948170076,64.7221234398387,125.27331069171,143.715579053665,306.018940467441,287.127668479496,289.223479563582,130.788748708937,96.3146981122967,113.943720947425,161.805741372125,67.8300273675401,59.447548068495,60.4717063926612,85.0569656245338,74.2235137396317,72.2343553780764,53.7553175107649,55.1622294075543,72.4598214003606,81.9249292072298,65.6902397536837,71.57039384478,62.0461254217737,71.3984311142199,0,0,0.895037932904712,0,0,0,0,0,0,0,0.43917392846563,1.89919659471683,2.5500670180478,2.22470665670658,0.324547393654683,0.696518949197069,0.930705723632056,4.5313218618015,2.85997455390064,3.34311751196608,0,1.72046919021225,0,0,0,0,0,0,0,0,0,1.52054421143703,1.70843440283719,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0,1.41867352879343,0,0,0,0.622422070799533,0,0.326923806226917,0.151357427644931,0,2.10889288650417,0.624320153660641,1.1409436430889,2.83952493048422,0.117434498643765,0,0.140450806702248,2.85815839756851,1.59684612505298,5.6829179646671,0,0.247266929278557,0,4.31170885089743,0.336672227908132,0.250237039743928,1.6623846929051,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,1.20036438433761,0.103052529238439,0.257640540045629,0.18611685633159,0.843881661206331,0.194874010322397,0.252433774244115,0.460249493211497,0.969876340912871,0,0.201504196455281,0,0,0,0,1.70763188581434,1.19276791489337,1.74290914304278,1.34759371519982,1.51392510525377,7.2995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,3.2925920906512,1.47008711385542,0,0,1.18157981336281,34.8755848537574,3.81264159483652,0.171567810298526,0,0,0.100528972411631,2.77765335475589,1.95484983186195,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,1.4512968087854,0,0.6312121671319,0.380987365753014,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0,1.80980402060889,25.0359512096318,0,0,0,0.514414748524284,1.41849132023278,2.1313774321288,6.71996570193294,288.132072462856,18.1112874091769,0.65147236858747,3.19852753868291,11.087326221068,88.9246162325779,61.8788755606209,75.0797163777248,0,0,0,0,0,0,0.144781306667579,0,0,64.5610429402717,97.9242878203578,87.544795392964,106.268034039632,0,0,0.773288812777695,0,0,1.49801404789436,0,3.31532410748828,2.4538298343828,2.00068208423871,2.17012018959788,0.207970861530807,0.356857977594324,1.26161932027148,0,0.300946099727719,0,0,0,0,1.82455590382974,2.74121620447837,1.02943027143257,58.5153513927771,44.2214111678165,59.5539772543219,0,0,1.20956117331872,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0.739144404124282,2.59627214591811,0.116210378459959,4.10922128611516,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0.183138929636687,0.41254749960294,0.574265537996172,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0.413509717453592,1.50388342815583,1.88521702088497,0.852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,1.73986598415015,0,0,0.372158369359667,0,0,2.55897791311334,0.42793898803392,2.22742273548156,0,2.51821440616641,3.0199073270966,2.94531005864216,0,0,0,2.92580243453754,0.243713489631284,0,0.545999645631943,1.27264888758341,1.13008116620243,0,0,0,10.9967351510671,3.9353685122798,0,2.16876448669825,0,3.01163839628508,16.211091767165,0,0,0.633322905892992,0.329294892959902,3.79473173765715,6.29882496440969,0.577332676353072,1.34060455107157,0,3.38917682796405,0,0,0,0.229723400206959,34.5064374277875,32.1147626999798,48.4200109098038,48.599282193389,49.7748350434295,41.5022919163339,35.1020434204775,61.8637637509531,3.09789806269672,0,0,4.45927620301725,0,14.2283686696828,115.10576891021,51.2918984582339,138.841393345966,0.211673582723883,0,29.7645008800266,0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| ||
|short_description=p2@CD7 | |short_description=p2@CD7 | ||
}} | }} |
Latest revision as of 12:19, 18 September 2015
Short description: | p2@CD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD7_5end |
Coexpression cluster: | C2445_Mesenchymal_CD4_Natural_acute_thymus_CD8_hepatocellular |
Association with transcript: | 0bp_to_ENST00000312648, NM_006137, uc002kel.1, uc002kem.2, uc010din.2, uc010wvk.1_5end |
EntrezGene: | CD7 |
HGNC: | 1695 |
UniProt: | P09564Q29VG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.35e-18 | 25 |
pro-T cell | 5.35e-18 | 25 |
mature alpha-beta T cell | 6.66e-17 | 18 |
alpha-beta T cell | 6.66e-17 | 18 |
immature T cell | 6.66e-17 | 18 |
mature T cell | 6.66e-17 | 18 |
immature alpha-beta T cell | 6.66e-17 | 18 |
hematopoietic stem cell | 7.26e-11 | 168 |
CD8-positive, alpha-beta T cell | 7.45e-11 | 11 |
leukocyte | 4.96e-10 | 136 |
hematopoietic cell | 6.09e-10 | 177 |
lymphocyte | 2.35e-09 | 53 |
common lymphoid progenitor | 2.35e-09 | 53 |
lymphoid lineage restricted progenitor cell | 6.27e-09 | 52 |
hematopoietic oligopotent progenitor cell | 6.28e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.28e-09 | 161 |
nongranular leukocyte | 6.58e-08 | 115 |
CD4-positive, alpha-beta T cell | 8.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.12e-07 | 15 |
haemolymphatic fluid | 1.12e-07 | 15 |
organism substance | 1.12e-07 | 15 |