MacroAPE 1083:Motif TGACNG: Difference between revisions
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0.446113!10429-106D6;0.59139!10464-106H5;0.671368!10827-111C8;0.453784!10789-110H6;0.848943!10828-111C9;0.32927!10788-110H5;0.755916!10792-110H9;0.449483!10765-110E9;0.801913!10829-111D1;0.822836!10830-111D2;0.338518!10831-111D3;0.84587!10832-111D4;0.527238!10833-111D5;0.766055!10764-110E8;0.655062!10770-110F5;0.881572!10399-106A3;0.897202!10400-106A4;0.861874!10405-106A9;0.88177!10834-111D6;0.922445!10835-111D7;0.653296!10836-111D8;0.793993!10837-111D9;0.722096!10699-109G6;0.81063!10802-111A1;0.697718!10796-110I4;0.713402!10010-101C1;0.0801423!10810-111A9;0.157898!10421-106C7;0.259314!10708-109H6;0.780255!12235-129G3;0.0596323!12236-129G4;0.690725!12237-129G5;0.90699!10167-103B5;0.338823!10151-102I7;0.263392!10428-106D5;0.279233!10795-110I3;0.034273!10805-111A4;0.732823!10052-101G7;0.0884896!10189-103D9;0.586858!10589-108D4;0.415195!10425-106D2;0.631611!10427-106D4;0.294359!10702-109G9;0.699542!10432-106D9;0.742084!10496-107C1;0.138777!10718-109I7;0.0288602!10011-101C2;0.625787!10053-101G8;0.325617!10686-109F2;0.062479!10084-102B3;0.860918!10012-101C3;0.36095!10085-102B4;0.245151!10482-107A5;0.547616!10419-106C5;0.0474417!10080-102A8;0.691953!10760-110E4;0.753788!10709-109H7;0.0637989!10710-109H8;0.0704975!10703-109H1;0.0295295!10719-109I8;0.960631!10642-109A3;0.207887!10177-103C6;0.487655!10164-103B2;0.332752!10173-103C2;0.362276!10166-103B4;0.217674!10083-102B2;0.196304!10188-103D8;0.27514!10552-107I3;0.380428!10553-107I4;0.0851187!10013-101C4;0.932373!10536-107G5;0.580199!10618-108G6;0.0202326!10423-106C9;0.407619!10785-110H2;0.35247!12238-129G6;0.214658!12239-129G7;0.931571!12240-129G8;0.645507!10416-106C2;0.873547!10801-110I9;0.79621!10766-110F1;0.336074!10824-111C5;0.823867!10825-111C6;0.635258!10826-111C7;0.564858!10454-106G4;0.637681!10409-106B4;0.858227!10638-108I8;0.947302!10636-108I6;0.168747!10513-107D9;0.0564474!10420-106C6;0.0542101!10082-102B1;0.655282!10014-101C5;0.845374!10070-101I7;0.323325!10452-106G2;0.502891!10453-106G3;0.876215!10449-106F8;0.617973!10042-101F6;0.591847!10069-101I6;0.133442!10193-103E4;0.244379!10631-108I1;0.213695!10438-106E6;0.740791!10488-107B2;0.107696!10196-103E7;0.48081!10071-101I8;0.55318!10071-101I8;0.930346!10041-101F5;0.437758!10451-106G1;0.391787!10450-106F9;0.688315!10604-108F1;0.681331!10605-108F2;0.0235376!10606-108F3;0.0356254!10603-108E9;0.0308408!10497-107C2;0.0144016!10448-106F7;0.00942631!10643-109A4;0.128364!10426-106D3;0.253308!10431-106D8;0.0999931!10197-103E8;0.198465!10443-106F2;0.362953!10815-111B5;0.391626!10816-111B6;0.100126!10817-111B7;0.126711!10015-101C6;0.115421!10410-106B5;0.236343!10054-101G9;0.808707!10758-110E2;0.355982!10711-109H9;0.0659403!10040-101F4;0.00746725!10470-106I2;0.209193!10415-106C1;0.139701!10198-103E9;0.0813894!10614-108G2;0.697505!10612-108F9;0.0702132!10549-107H9;0.0398538!10615-108G3;0.795159!10487-107B1;0.884016!10433-106E1;0.401486!10688-109F4;0.352135!10444-106F3;0.264552!10444-106F3;0.213344!10485-107A8;0.241106!10413-106B8;0.0605557!10175-103C4;0.0396553!10161-103A8;0.229711!12131-128D7;0.12841!10624-108H3;0.602583!10712-109I1;0.0426863!10205-103F7;0.903465!10206-103F8;0.161012!10207-103F9;0.0761413!10050-101G5;0.417598!10051-101G6;0.110521!10016-101C7;0.0565828!10046-101G1;0.0129476!10778-110G4;0.0331214!10633-108I3;0.582413!10818-111B8;0.0190222!10819-111B9;0.0045702!10820-111C1;0.00502102!10484-107A7;0.0050345!10808-111A7;0.161913!10169-103B7;0.502177!10153-102I9;0.315738!13425-144D5;0.265382!13433-144E4;0.0162895!13437-144E8;0.0086762!11904-125F5;0.00641783!11905-125F6;0.575962!10039-101F3;0.566231!10791-110H8;0.233318!10017-101C8;0.91182!10045-101F9;0.0767446!10509-107D5;0.408319!10839-111E2;0.0875542!10692-109F8;0.0122175!10079-102A7;0.15204!10078-102A6;0.0972621!10721-110A1;0.0561165!10569-108B2;0.179022!10570-108B3;0.776738!10571-108B4;0.696498!10647-109A8;0.857289!10752-110D5;0.458512!10782-110G8;0.386714!10726-110A6;0.878685!10018-101C9;0.125128!10086-102B5;0.477778!10182-103D2;0.26257!10165-103B3;0.28504!10499-107C4;0.192993!10408-106B3;0.109074!10019-101D1;0.0895595!10068-101I5;0.161253!10075-102A3;0.435231!10077-102A5;0.233089!10727-110A7;0.198946!10775-110G1;0.761551!10412-106B7;0.928363!12231-129F8;0.462784!12232-129F9;0.0334921!12233-129G1;0.0489282!12234-129G2;0.0477845!10414-106B9;0.0708871!10170-103B8;0.399981!10183-103D3;0.298631!10150-102I6;0.322588!10174-103C3;0.257602!10155-103A2;0.284281!10038-101F2;0.198264!10838-111E1;0.214289!10759-110E3;0.36711!10514-107E1;0.00752599!10465-106H6;0.611029!10691-109F7;0.0856254!10843-111E6;0.0800261!10844-111E7;0.927041!11747-123G1;0.705496!11748-123G2;0.0472895!11749-123G3;0.0959901!11750-123G4;0.11468!11751-123G5;0.639249!11840-124H4;0.665115!11752-123G6;0.729761!11753-123G7;0.192958!11754-123G8;0.39937!11755-123G9;0.0465275!11756-123H1;0.059881!11833-124G6;0.147665!11760-123H5;0.160781!11836-124G9;0.066115!11758-123H3;0.356018!11835-124G8;0.517455!11762-123H7;0.527048!11838-124H2;0.300924!11757-123H2;0.796765!11759-123H4;0.116505!11761-123H6;0.395207!11842-124H6;0.12139!11837-124H1;0.578006!10568-108B1;0.558095!13230-141I8;0.381551!13231-141I9;0.601231!10696-109G3;0.580682!10493-107B7;0.616463!10494-107B8;0.0713761!10850-111F4;0.0381175!10851-111F5;0.000479669!10852-111F6;0.0746673!10853-111F7;0.261076!10854-111F8;0.01033!10855-111F9;0.041715!10856-111G1;0.0048255!10847-111F1;0.238413!10846-111E9;0.21997!10848-111F2;0.0195922!10845-111E8;0.111125!10857-111G2;0.0275842!10858-111G3;0.0738769!10156-103A3;0.0938928!11901-125F2;0.2183!11902-125F3;0.420043!11903-125F4;0.659099!10689-109F5;0.477574!10648-109A9;0.0620514!10784-110H1;0.0156773!10744-110C6;0.132266!10772-110F7;0.548904!10474-106I6;0.65763!10600-108E6;0.379605!10684-109E9;0.0821922!12226-129F3;0.0094558!12227-129F4;0.691627!10508-107D4;0.355758!10539-107G8;0.909921!10607-108F4;0.718589!10555-107I6;0.0424363!10774-110F9;0.539146!10637-108I7;0.0186523!10663-109C6;0.0515431!10728-110A8;0.116765!10729-110A9;0.0163343!10430-106D7;0.139159!10730-110B1;0.868485!10813-111B3;0.722865!10812-111B2;0.417126!10037-101F1;0.841022!10172-103C1;0.231856!10163-103B1;0.334059!10076-102A4;0.220348!10073-102A1;0.302924!10036-101E9;0.475725!10195-103E6;0.242783!10277-104E7;0.296529!10434-106E2;0.117028!10550-107I1;0.244998!10545-107H5;0.0803357!10544-107H4;0.417462!10704-109H2;0.0265802!10510-107D6;0.44196!10558-107I9;0.265645!10020-101D2;0.550513!10732-110B3;0.83484!10049-101G4;0.0872302!10698-109G5;0.441936!10437-106E5;0.510674!10417-106C3;0.0202595!10035-101E8;0.633416!10171-103B9;0.222016!10157-103A4;0.225872!10034-101E7;0.267582!10072-101I9;0.202958!10199-103F1;0.514992!10200-103F2;0.38501!10697-109G4;0.191604!10723-110A3;0.0243069!10179-103C8;0.169876!10160-103A7;0.412431!10180-103C9;0.238934!10162-103A9;0.328751!10021-101D3;0.157516!10840-111E3;0.391133!10706-109H4;0.79419!10033-101E6;0.0459131!10032-101E5;0.174241!10490-107B4;0.230513!10439-106E7;0.0525778!10022-101D4;0.262129!10176-103C5;0.443446!10469-106I1;0.32181!10067-101I4;0.269331!10411-106B6;0.931266!10471-106I3;0.186738!10030-101E3;0.282815!10475-106I7;0.243231!10787-110H4;0.717394!10477-106I9;0.47838!10695-109G2;0.281534!11771-123I7;0.401727!11772-123I8;0.563274!11773-123I9;0.629411!10093-102C3;0.161643!10442-106F1;0.499994!10442-106F1;0.757805!10201-103F3;0.736019!10639-108I9;0.453462!11843-124H7;0.264179!11841-124H5;0.0813661!10693-109F9;0.0475335!10436-106E4;0.167759!10483-107A6;0.640719!10282-104F3;0.153143!10023-101D5;0.00516442!10066-101I3;0.0157945!10065-101I2;0.436893!10800-110I8;0.286455!10610-108F7;0.811941!10841-111E4;0.804484!10541-107H1;0.71885!10842-111E5;0.444546!10562-108A4;0.401972!10024-101D6;0.513377!10064-101I1;0.204019!10609-108F6;0.938226!10048-101G3;0.279913!10781-110G7;0.269601!10181-103D1;0.366418!10159-103A6;0.304998!10056-101H2;0.0899503!10737-110B8;0.444782!10025-101D7;0.269873!10044-101F8;0.0751076!10424-106D1;0.154324!10463-106H4;0.882569!10616-108G4;0.125777!10486-107A9;0.195132!10062-101H8;0.650464!10202-103F4;0.731139!10158-103A5;0.18282!10441-106E9;0.0460892!10031-101E4;0.274458!10063-101H9;0.26132!10063-101H9;0.446734!11763-123H8;0.870279!11765-123I1;0.435972!11768-123I4;0.499548!10807-111A6;0.564362!10790-110H7;0.166734!10798-110I6;0.158093!10786-110H3;0.394531!10591-108D6;0.0799719!10593-108D8;0.14993!10590-108D5;0.176778!10026-101D8;0.186451!10096-102C6;0.435254!10168-103B6;0.612914!10154-103A1;0.177102!10209-103G2;0.156379!10061-101H7;0.126035!10027-101D9;0.394917!10043-101F7;0.112602!10783-110G9;0.0634519!10028-101E1;0.00918047!10060-101H6;0.223433!10203-103F5;0.754586!10059-101H5;0.1339!10047-101G2;0.222111!10029-101E2;0.104797!10058-101H4;0.576927!10418-106C4;0.622501!10492-107B6;0.131885!10694-109G1;0.0104374!10797-110I5;0.389808!10057-101H3;0.414434!10100-102D1;0.381433!10055-101H1;0.791828!10204-103F6;0.844799!10191-103E2;0.371058!10563-108A5;0.224971 | ||
|name=motif_TGACNG | |name=motif_TGACNG | ||
|tomtom_result=hth#MA0227.1;0;0.000354767;0.168869;0.20339;6;TGACAG;TGACAG;+!achi#MA0207.1;0;0.000427399;0.203442;0.20339;6;TGACAG;TGACAG;+!vis#MA0252.1;0;0.000712732;0.33926;0.226116;6;TGACAG;TGACAG;+!TOS8#MA0408.1;2;0.00167868;0.799051;0.399424;6;TGACAG;TTTGACAG;-!Mafb#MA0117.1;2;0.00267428;1.27296;0.509055;6;TGACAG;GCTGACGG;+!Pax2#MA0067.1;3;0.00841291;4.00455;0.999747;5;TGACAG;GCGTGACT;-!ovo#MA0126.1;2;0.0163076;7.76243;0.999747;6;TGACAG;AGTAACAGT;+!prd#MA0239.1;2;0.0163076;7.76243;0.999747;6;TGACAG;AGTAACAGT;+!AP1#MA0099.2;0;0.0173192;8.24396;0.999747;6;TGACAG;TGACTCA;+!myb.Ph3#MA0054.1;0;0.0177376;8.44312;0.999747;6;TGACAG;TAACCGTTT;+ | |||
}} | }} |
Latest revision as of 12:23, 7 September 2012
Full Name: motif_TGACNG
Motif matrix | |||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
hth#MA0227.1 | 0 | 0.000354767 | 0.168869 | 0.20339 | 6 | TGACAG | TGACAG | + |
achi#MA0207.1 | 0 | 0.000427399 | 0.203442 | 0.20339 | 6 | TGACAG | TGACAG | + |
vis#MA0252.1 | 0 | 0.000712732 | 0.33926 | 0.226116 | 6 | TGACAG | TGACAG | + |
TOS8#MA0408.1 | 2 | 0.00167868 | 0.799051 | 0.399424 | 6 | TGACAG | TTTGACAG | - |
Mafb#MA0117.1 | 2 | 0.00267428 | 1.27296 | 0.509055 | 6 | TGACAG | GCTGACGG | + |
Pax2#MA0067.1 | 3 | 0.00841291 | 4.00455 | 0.999747 | 5 | TGACAG | GCGTGACT | - |
ovo#MA0126.1 | 2 | 0.0163076 | 7.76243 | 0.999747 | 6 | TGACAG | AGTAACAGT | + |
prd#MA0239.1 | 2 | 0.0163076 | 7.76243 | 0.999747 | 6 | TGACAG | AGTAACAGT | + |
AP1#MA0099.2 | 0 | 0.0173192 | 8.24396 | 0.999747 | 6 | TGACAG | TGACTCA | + |
myb.Ph3#MA0054.1 | 0 | 0.0177376 | 8.44312 | 0.999747 | 6 | TGACAG | TAACCGTTT | + |