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MacroAPE 1083:CNhs13059 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;28.092306783765924;571.1015216905006;42.31637490121563;494.08403936581914!2;33.59736611133233;739.7910183298012;1.766332001383117;360.439526...")
 
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81-122H7;0.538535!11216-116B1;0.251106!12179-129A1;0.448731!12180-129A2;1.12163e-05!12181-129A3;2.25259e-05!12176-128I7;9.40243e-06!12177-128I8;8.5918e-07!12182-129A4;6.45672e-06!12183-129A5;2.34783e-06!12184-129A6;3.07989e-05!10809-111A8;1.0377e-05!10597-108E3;0.233288!10717-109I6;0.00233397!10455-106G5;0.767128!10534-107G3;0.0117398!10429-106D6;0.0144581!10464-106H5;0.0112598!10827-111C8;0.178835!10789-110H6;0.00103354!10828-111C9;6.79508e-05!10788-110H5;0.000122054!10792-110H9;0.0149393!10765-110E9;0.00108911!10829-111D1;0.0018049!10830-111D2;0.00322318!10831-111D3;0.00686824!10832-111D4;0.000300812!10833-111D5;0.00222248!10764-110E8;0.00379881!10770-110F5;0.00737088!10399-106A3;0.00269078!10400-106A4;0.00341953!10405-106A9;0.00246477!10834-111D6;0.00269579!10835-111D7;0.000439133!10836-111D8;0.666921!10837-111D9;0.204832!10699-109G6;0.0383611!10802-111A1;0.102107!10796-110I4;0.150435!10010-101C1;0.582631!10810-111A9;0.630378!10421-106C7;0.232614!10708-109H6;0.0155816!12235-129G3;0.0038616!12236-129G4;0.100479!12237-129G5;0.23066!10167-103B5;0.106334!10151-102I7;0.00674366!10428-106D5;0.00920685!10795-110I3;0.172762!10805-111A4;0.271941!10052-101G7;0.12253!10189-103D9;0.323243!10589-108D4;0.00961938!10425-106D2;0.119443!10427-106D4;0.126136!10702-109G9;0.163173!10432-106D9;0.376579!10496-107C1;0.657414!10718-109I7;0.50187!10011-101C2;0.00157541!10053-101G8;0.815267!10686-109F2;0.000138053!10084-102B3;0.269607!10012-101C3;0.000611722!10085-102B4;0.0148776!10482-107A5;0.000365873!10419-106C5;0.315622!10080-102A8;0.36384!10760-110E4;0.525123!10709-109H7;0.839924!10710-109H8;0.471939!10703-109H1;0.191665!10719-109I8;0.0121454!10642-109A3;0.000861653!10177-103C6;1.16182e-06!10164-103B2;0.0146538!10173-103C2;0.0212247!10166-103B4;0.000595226!10083-102B2;0.00174286!10188-103D8;0.000664047!10552-107I3;0.00514638!10553-107I4;0.324032!10013-101C4;0.548178!10536-107G5;0.360003!10618-108G6;0.00203845!10423-106C9;0.427079!10785-110H2;0.487469!12238-129G6;0.512677!12239-129G7;0.831679!12240-129G8;0.717803!10416-106C2;0.1102!10801-110I9;0.00724037!10766-110F1;0.0231402!10824-111C5;0.000468932!10825-111C6;0.996114!10826-111C7;0.985792!10454-106G4;0.752454!10409-106B4;0.752032!10638-108I8;0.0117455!10636-108I6;0.341616!10513-107D9;0.480603!10420-106C6;0.390418!10082-102B1;0.008713!10014-101C5;0.713415!10070-101I7;0.717453!10452-106G2;0.969061!10453-106G3;0.569804!10449-106F8;0.971895!10042-101F6;0.981243!10069-101I6;0.0944901!10193-103E4;0.951849!10631-108I1;0.0135106!10438-106E6;0.0471672!10488-107B2;0.23346!10196-103E7;0.806472!10071-101I8;0.0211214!10071-101I8;0.972864!10041-101F5;4.57058e-05!10451-106G1;0.498724!10450-106F9;0.0282604!10604-108F1;0.0113404!10605-108F2;0.881328!10606-108F3;0.542402!10603-108E9;0.732317!10497-107C2;0.842482!10448-106F7;0.97477!10643-109A4;0.508485!10426-106D3;0.986635!10431-106D8;0.750152!10197-103E8;0.509079!10443-106F2;0.843293!10815-111B5;0.000181224!10816-111B6;0.415522!10817-111B7;0.272552!10015-101C6;0.31736!10410-106B5;0.699072!10054-101G9;0.0280261!10758-110E2;0.053919!10711-109H9;0.911824!10040-101F4;0.912568!10470-106I2;0.00517071!10415-106C1;0.192034!10198-103E9;0.375234!10614-108G2;0.710098!10612-108F9;0.104538!10549-107H9;0.560443!10615-108G3;0.0625908!10487-107B1;0.0245972!10433-106E1;0.291836!10688-109F4;0.18194!10444-106F3;0.858008!10444-106F3;0.0753112!10485-107A8;0.0711991!10413-106B8;0.11015!10175-103C4;0.027706!10161-103A8;0.0102538!12131-128D7;0.167135!10624-108H3;0.0726638!10712-109I1;0.00744182!10205-103F7;0.0129715!10206-103F8;0.104424!10207-103F9;0.0570619!10050-101G5;0.42214!10051-101G6;0.172954!10016-101C7;0.216063!10046-101G1;0.291627!10778-110G4;0.115992!10633-108I3;0.38151!10818-111B8;0.0800545!10819-111B9;0.188313!10820-111C1;0.238948!10484-107A7;0.221347!10808-111A7;0.0277814!10169-103B7;0.218437!10153-102I9;0.00400595!13425-144D5;0.0212654!13433-144E4;0.0122112!13437-144E8;0.00760211!11904-125F5;0.0125975!11905-125F6;0.00376961!10039-101F3;0.138347!10791-110H8;0.00395227!10017-101C8;0.975211!10045-101F9;0.619696!10509-107D5;0.191517!10839-111E2;0.947366!10692-109F8;0.241761!10079-102A7;0.0372061!10078-102A6;0.712352!10721-110A1;0.159036!10569-108B2;0.13179!10570-108B3;0.312034!10571-108B4;0.490088!10647-109A8;0.363834!10752-110D5;0.000299888!10782-110G8;0.0253338!10726-110A6;0.042984!10018-101C9;0.626984!10086-102B5;0.637155!10182-103D2;0.7518!10165-103B3;0.00635019!10499-107C4;0.0401266!10408-106B3;0.187037!10019-101D1;0.858048!10068-101I5;0.371279!10075-102A3;0.350843!10077-102A5;0.391582!10727-110A7;0.00248022!10775-110G1;0.0116613!10412-106B7;0.0112795!12231-129F8;0.764524!12232-129F9;0.177053!12233-129G1;0.18351!12234-129G2;0.285075!10414-106B9;0.133225!10170-103B8;0.112275!10183-103D3;0.00220566!10150-102I6;0.00104654!10174-103C3;0.0119884!10155-103A2;0.0358024!10038-101F2;0.0875401!10838-111E1;0.120005!10759-110E3;0.00284237!10514-107E1;0.852063!10465-106H6;0.0383828!10691-109F7;0.0213615!10843-111E6;0.798558!10844-111E7;0.135256!11747-123G1;0.0742422!11748-123G2;0.34998!11749-123G3;0.237421!11750-123G4;0.290693!11751-123G5;0.0135279!11840-124H4;0.0722303!11752-123G6;0.0108168!11753-123G7;0.342645!11754-123G8;0.0489982!11755-123G9;0.339778!11756-123H1;0.541197!11833-124G6;0.605935!11760-123H5;0.860873!11836-124G9;0.330585!11758-123H3;0.140749!11835-124G8;0.344556!11762-123H7;0.487673!11838-124H2;0.276675!11757-123H2;0.47348!11759-123H4;0.387688!11761-123H6;0.305024!11842-124H6;0.112959!11837-124H1;0.230737!10568-108B1;0.828664!13230-141I8;0.362821!13231-141I9;0.215991!10696-109G3;0.132976!10493-107B7;0.0212941!10494-107B8;0.00685239!10850-111F4;0.281257!10851-111F5;0.841238!10852-111F6;0.0945885!10853-111F7;0.0173556!10854-111F8;0.941784!10855-111F9;0.281609!10856-111G1;0.981905!10847-111F1;0.117234!10846-111E9;0.186349!10848-111F2;0.318831!10845-111E8;0.390901!10857-111G2;0.0890535!10858-111G3;0.0874023!10156-103A3;0.903921!11901-125F2;0.0127662!11902-125F3;0.199451!11903-125F4;0.200464!10689-109F5;0.286506!10648-109A9;0.000670948!10784-110H1;0.230283!10744-110C6;0.602087!10772-110F7;0.0269146!10474-106I6;0.00188889!10600-108E6;0.010215!10684-109E9;0.00725473!12226-129F3;0.000259575!12227-129F4;0.571264!10508-107D4;0.802013!10539-107G8;0.000918554!10607-108F4;0.0314974!10555-107I6;0.0105852!10774-110F9;0.00322427!10637-108I7;0.425874!10663-109C6;0.0218942!10728-110A8;0.0334797!10729-110A9;0.041378!10430-106D7;0.174465!10730-110B1;0.0166971!10813-111B3;0.00760503!10812-111B2;0.049707!10037-101F1;0.440738!10172-103C1;0.00650106!10163-103B1;0.00526423!10076-102A4;0.0122944!10073-102A1;0.00245326!10036-101E9;3.45925e-05!10195-103E6;0.003599!10277-104E7;0.00914852!10434-106E2;0.135097!10550-107I1;0.178059!10545-107H5;0.134223!10544-107H4;0.924187!10704-109H2;0.531657!10510-107D6;0.050422!10558-107I9;0.114847!10020-101D2;0.00263542!10732-110B3;0.141073!10049-101G4;0.241247!10698-109G5;0.265236!10437-106E5;0.793183!10417-106C3;0.861345!10035-101E8;0.395224!10171-103B9;0.00370962!10157-103A4;0.000717846!10034-101E7;0.0115784!10072-101I9;0.00399967!10199-103F1;1.06326e-05!10200-103F2;0.763707!10697-109G4;0.884882!10723-110A3;0.104061!10179-103C8;0.781458!10160-103A7;0.0146248!10180-103C9;0.0139775!10162-103A9;0.0041845!10021-101D3;0.00160561!10840-111E3;0.817822!10706-109H4;0.191295!10033-101E6;0.659167!10032-101E5;0.0109628!10490-107B4;0.00592272!10439-106E7;0.237259!10022-101D4;0.345974!10176-103C5;0.663653!10469-106I1;0.00475611!10067-101I4;0.123823!10411-106B6;0.134587!10471-106I3;0.046153!10030-101E3;0.0878752!10475-106I7;0.0409954!10787-110H4;0.013547!10477-106I9;0.117784!10695-109G2;0.000466405!11771-123I7;0.400012!11772-123I8;0.240729!11773-123I9;0.0202665!10093-102C3;0.0681664!10442-106F1;0.714894!10442-106F1;0.922264!10201-103F3;0.811432!10639-108I9;0.0294265!11843-124H7;0.452497!11841-124H5;0.0165015!10693-109F9;0.077505!10436-106E4;0.113034!10483-107A6;0.492492!10282-104F3;0.883672!10023-101D5;0.761882!10066-101I3;0.585333!10065-101I2;0.606359!10800-110I8;0.69338!10610-108F7;0.014161!10841-111E4;0.0691255!10541-107H1;0.00307647!10842-111E5;0.223573!10562-108A4;0.00317281!10024-101D6;0.0558941!10064-101I1;0.58025!10609-108F6;0.930146!10048-101G3;0.381261!10781-110G7;0.0926024!10181-103D1;0.0108238!10159-103A6;0.0478416!10056-101H2;0.147453!10737-110B8;0.019236!10025-101D7;0.49098!10044-101F8;0.00382863!10424-106D1;0.0393493!10463-106H4;0.109561!10616-108G4;0.917595!10486-107A9;0.77987!10062-101H8;0.514156!10202-103F4;0.531735!10158-103A5;0.161187!10441-106E9;0.382268!10031-101E4;0.0143247!10063-101H9;0.00587093!10063-101H9;3.17278e-05!11763-123H8;0.97893!11765-123I1;0.349706!11768-123I4;0.133459!10807-111A6;0.248635!10790-110H7;0.0452497!10798-110I6;0.103548!10786-110H3;0.0297027!10591-108D6;0.222465!10593-108D8;0.0605062!10590-108D5;0.365796!10026-101D8;0.336515!10096-102C6;0.219957!10168-103B6;0.0727742!10154-103A1;0.00210149!10209-103G2;0.0824723!10061-101H7;0.0566231!10027-101D9;0.587481!10043-101F7;0.006132!10783-110G9;0.035245!10028-101E1;0.0506728!10060-101H6;0.120635!10203-103F5;0.0961606!10059-101H5;0.161321!10047-101G2;0.758591!10029-101E2;1.57373e-06!10058-101H4;0.0707563!10418-106C4;0.695864!10492-107B6;0.606604!10694-109G1;0.450969!10797-110I5;0.262131!10057-101H3;0.269408!10100-102D1;0.42397!10055-101H1;0.113257!10204-103F6;0.0646691!10191-103E2;0.414426!10563-108A5;0.0576281
|name=CNhs13059_bl_f0
|name=CNhs13059_bl_f0
|tomtom_result=Klf4#MA0039.1;-3;0.000147979;0.070438;0.140692;9;CCCTCTTCCTCT;CCTTCCTTTA;-!SPI1#MA0080.2;-4;0.00079903;0.380338;0.37984;6;CCCTCTTCCTCT;CTTCCG;-!GCR2#MA0305.1;-3;0.00222703;1.06006;0.652026;7;CCCTCTTCCTCT;GCTTCCT;+!SPI1#MA0080.2;-3;0.00297651;1.41682;0.652026;7;CCCTCTTCCTCT;ACTTCCT;-!SPIB#MA0081.1;-5;0.00342899;1.6322;0.652026;7;CCCTCTTCCTCT;TTCCTCT;-!GABPA#MA0062.1;-2;0.00445619;2.12114;0.69074;10;CCCTCTTCCTCT;CTCTTCCGGT;-!ELF5#MA0136.1;-2;0.00508563;2.42076;0.69074;9;CCCTCTTCCTCT;TACTTCCTT;+!SP1#MA0079.2;-1;0.00810619;3.85855;0.963374;10;CCCTCTTCCTCT;CCCCGCCCCC;+!ETS1#MA0098.1;-4;0.0114817;5.4653;0.998691;6;CCCTCTTCCTCT;CTTCCG;+!SFL1#MA0377.1;4;0.0118701;5.65017;0.998691;12;CCCTCTTCCTCT;TTTTATTTCTTCTATTCTCTA;-!Pax4#MA0068.1;15;0.0133055;6.33344;0.998691;12;CCCTCTTCCTCT;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!Ar#MA0007.1;9;0.0134608;6.40732;0.998691;12;CCCTCTTCCTCT;ATAAGAACACCCTGTACCCGCC;+!Trl#MA0205.1;-1;0.0158305;7.5353;0.998691;10;CCCTCTTCCTCT;TTGCTCTCTC;+!TEAD1#MA0090.1;-1;0.0174215;8.29263;0.998691;11;CCCTCTTCCTCT;CACATTCCTCCG;+!YGR067C#MA0425.1;2;0.018368;8.74318;0.998691;12;CCCTCTTCCTCT;ACCCCACTTTTTTG;+!EWSR1-FLI1#MA0149.1;9;0.020843;9.92128;0.998691;9;CCCTCTTCCTCT;CCTTCCTTCCTTCCTTCC;-
}}
}}

Latest revision as of 12:36, 7 September 2012

Full Name: CNhs13059_bl_f0

Motif matrix
POACGT
128.092306783765924571.101521690500642.31637490121563494.08403936581914
233.59736611133233739.79101832980121.766332001383117360.4395262987836
3298.7684715434198458.2380341296668613.38354023212263365.2041968360921
470.34495765398886383.5278149304827535.448785385607636646.2726847712216
55.0221411370585891123.90586125785650.81874885022882525.847491496157806
60.015.7137114307415050.01119.8805313105604
70.1157868295685027456.8033476885154388.68430906702659989.9907991561914
82.6792287761076894847.991693680675219.052051694980808265.87126858953684
912.825514777190383880.15139158157150.09968716218869152242.51764922035065
10111.2581937172671477.4276694227981513.352160206733338533.5562193945024
11201.57684360698386500.1037790854772111.61163789338187322.30198215545835
12185.87186390816203317.973127153297344.44754528111783587.3017063987238

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.1-30.0001479790.0704380.1406929CCCTCTTCCTCTCCTTCCTTTA-
SPI1#MA0080.2-40.000799030.3803380.379846CCCTCTTCCTCTCTTCCG-
GCR2#MA0305.1-30.002227031.060060.6520267CCCTCTTCCTCTGCTTCCT+
SPI1#MA0080.2-30.002976511.416820.6520267CCCTCTTCCTCTACTTCCT-
SPIB#MA0081.1-50.003428991.63220.6520267CCCTCTTCCTCTTTCCTCT-
GABPA#MA0062.1-20.004456192.121140.6907410CCCTCTTCCTCTCTCTTCCGGT-
ELF5#MA0136.1-20.005085632.420760.690749CCCTCTTCCTCTTACTTCCTT+
SP1#MA0079.2-10.008106193.858550.96337410CCCTCTTCCTCTCCCCGCCCCC+
ETS1#MA0098.1-40.01148175.46530.9986916CCCTCTTCCTCTCTTCCG+
SFL1#MA0377.140.01187015.650170.99869112CCCTCTTCCTCTTTTTATTTCTTCTATTCTCTA-
Pax4#MA0068.1150.01330556.333440.99869112CCCTCTTCCTCTGAAAAATTTCCCATACTCCACTCCCCCCCC+
Ar#MA0007.190.01346086.407320.99869112CCCTCTTCCTCTATAAGAACACCCTGTACCCGCC+
Trl#MA0205.1-10.01583057.53530.99869110CCCTCTTCCTCTTTGCTCTCTC+
TEAD1#MA0090.1-10.01742158.292630.99869111CCCTCTTCCTCTCACATTCCTCCG+
YGR067C#MA0425.120.0183688.743180.99869112CCCTCTTCCTCTACCCCACTTTTTTG+
EWSR1-FLI1#MA0149.190.0208439.921280.9986919CCCTCTTCCTCTCCTTCCTTCCTTCCTTCC-
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