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MacroAPE 1083:Motif GANACT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;16032;0!02;16032;0;0;0!03;4008;4008;4008;4008!04;16032;0;0;0!05;0;16032;0;0!06;0;0;0;16032 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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0827-111C8;0.375208!10789-110H6;0.975503!10828-111C9;0.44564!10788-110H5;0.999899!10792-110H9;0.1907!10765-110E9;0.429361!10829-111D1;0.335523!10830-111D2;0.1546!10831-111D3;0.356422!10832-111D4;0.679362!10833-111D5;0.353266!10764-110E8;0.449027!10770-110F5;0.819456!10399-106A3;0.965586!10400-106A4;0.542053!10405-106A9;0.646645!10834-111D6;0.598608!10835-111D7;0.423512!10836-111D8;0.307734!10837-111D9;0.844537!10699-109G6;0.298646!10802-111A1;0.709146!10796-110I4;0.363731!10010-101C1;0.976658!10810-111A9;0.0021583!10421-106C7;0.0418989!10708-109H6;0.800254!12235-129G3;0.122691!12236-129G4;0.0116822!12237-129G5;0.0741313!10167-103B5;0.189793!10151-102I7;0.973899!10428-106D5;0.702322!10795-110I3;0.616505!10805-111A4;0.215698!10052-101G7;0.0787548!10189-103D9;0.0501309!10589-108D4;0.0046801!10425-106D2;0.0088609!10427-106D4;0.838204!10702-109G9;0.629634!10432-106D9;0.536897!10496-107C1;0.579589!10718-109I7;0.305826!10011-101C2;0.224958!10053-101G8;0.0196761!10686-109F2;0.911795!10084-102B3;0.851852!10012-101C3;0.665184!10085-102B4;0.989467!10482-107A5;0.620086!10419-106C5;0.323229!10080-102A8;0.646715!10760-110E4;3.1989e-05!10709-109H7;0.197152!10710-109H8;0.664327!10703-109H1;0.326784!10719-109I8;0.0002753!10642-109A3;0.0333866!10177-103C6;0.0961444!10164-103B2;0.981608!10173-103C2;0.869322!10166-103B4;0.91444!10083-102B2;0.613122!10188-103D8;0.656484!10552-107I3;0.940003!10553-107I4;0.227032!10013-101C4;0.217065!10536-107G5;0.0168739!10618-108G6;0.00775204!10423-106C9;0.0434996!10785-110H2;0.101286!12238-129G6;0.723664!12239-129G7;0.000239487!12240-129G8;0.0286575!10416-106C2;0.00404345!10801-110I9;0.240524!10766-110F1;0.866165!10824-111C5;0.78293!10825-111C6;0.31756!10826-111C7;0.319536!10454-106G4;0.369496!10409-106B4;0.220152!10638-108I8;0.87977!10636-108I6;0.17493!10513-107D9;0.737965!10420-106C6;0.0894394!10082-102B1;0.154135!10014-101C5;0.0537353!10070-101I7;0.0379068!10452-106G2;0.0337859!10453-106G3;0.142448!10449-106F8;0.879968!10042-101F6;0.746582!10069-101I6;0.592761!10193-103E4;0.238277!10631-108I1;0.741917!10438-106E6;0.29598!10488-107B2;0.946448!10196-103E7;0.0198361!10071-101I8;0.0935494!10071-101I8;0.213268!10041-101F5;0.996126!10451-106G1;0.00717943!10450-106F9;0.596142!10604-108F1;0.303073!10605-108F2;0.14367!10606-108F3;0.1337!10603-108E9;0.772608!10497-107C2;0.336409!10448-106F7;0.792804!10643-109A4;0.225926!10426-106D3;0.112524!10431-106D8;0.812766!10197-103E8;0.485943!10443-106F2;0.180469!10815-111B5;0.349903!10816-111B6;0.262914!10817-111B7;0.309852!10015-101C6;0.245058!10410-106B5;0.0110645!10054-101G9;0.215031!10758-110E2;0.327381!10711-109H9;0.0490264!10040-101F4;0.0893114!10470-106I2;0.876355!10415-106C1;0.548744!10198-103E9;0.455609!10614-108G2;0.0156747!10612-108F9;0.169691!10549-107H9;0.407651!10615-108G3;0.109771!10487-107B1;0.103445!10433-106E1;0.0174341!10688-109F4;0.151635!10444-106F3;0.72255!10444-106F3;0.542241!10485-107A8;0.599026!10413-106B8;0.641587!10175-103C4;0.907412!10161-103A8;0.918429!12131-128D7;0.441182!10624-108H3;0.660265!10712-109I1;0.671772!10205-103F7;0.61099!10206-103F8;0.0760077!10207-103F9;0.144827!10050-101G5;0.00405762!10051-101G6;0.450744!10016-101C7;0.61277!10046-101G1;0.219816!10778-110G4;0.0347912!10633-108I3;0.184004!10818-111B8;0.190707!10819-111B9;0.202299!10820-111C1;0.18526!10484-107A7;0.263633!10808-111A7;0.315318!10169-103B7;0.179606!10153-102I9;0.798625!13425-144D5;0.632306!13433-144E4;0.0822183!13437-144E8;0.0571262!11904-125F5;0.040616!11905-125F6;0.108257!10039-101F3;0.0684394!10791-110H8;0.86474!10017-101C8;0.745376!10045-101F9;0.0210241!10509-107D5;0.00624307!10839-111E2;0.703087!10692-109F8;0.0113202!10079-102A7;0.354911!10078-102A6;0.258204!10721-110A1;0.224055!10569-108B2;0.135081!10570-108B3;0.0508403!10571-108B4;0.0217881!10647-109A8;0.100359!10752-110D5;0.590601!10782-110G8;0.976751!10726-110A6;0.186194!10018-101C9;0.0922439!10086-102B5;0.503046!10182-103D2;0.310337!10165-103B3;0.743599!10499-107C4;0.575201!10408-106B3;0.471715!10019-101D1;0.913211!10068-101I5;0.00150257!10075-102A3;0.000103628!10077-102A5;0.002084!10727-110A7;0.0174522!10775-110G1;0.484264!10412-106B7;0.975459!12231-129F8;0.0619083!12232-129F9;0.0496104!12233-129G1;0.00960435!12234-129G2;0.0131723!10414-106B9;0.0252695!10170-103B8;0.588297!10183-103D3;0.767902!10150-102I6;0.753259!10174-103C3;0.801759!10155-103A2;0.470131!10038-101F2;0.27507!10838-111E1;0.548083!10759-110E3;0.585883!10514-107E1;0.470674!10465-106H6;0.522823!10691-109F7;0.363865!10843-111E6;0.745844!10844-111E7;0.0369999!11747-123G1;0.0141561!11748-123G2;0.212045!11749-123G3;0.0806563!11750-123G4;0.432825!11751-123G5;0.248219!11840-124H4;0.226334!11752-123G6;0.632338!11753-123G7;0.152392!11754-123G8;0.43731!11755-123G9;0.800236!11756-123H1;0.58715!11833-124G6;0.969665!11760-123H5;0.18141!11836-124G9;0.974017!11758-123H3;0.201166!11835-124G8;0.26442!11762-123H7;0.833702!11838-124H2;0.227029!11757-123H2;0.699393!11759-123H4;0.758798!11761-123H6;0.746534!11842-124H6;0.571211!11837-124H1;0.670555!10568-108B1;0.996258!13230-141I8;0.013953!13231-141I9;0.511997!10696-109G3;0.450804!10493-107B7;0.190885!10494-107B8;0.935632!10850-111F4;0.443614!10851-111F5;0.0650491!10852-111F6;0.838194!10853-111F7;0.893016!10854-111F8;0.867496!10855-111F9;0.0381317!10856-111G1;0.391586!10847-111F1;0.0176415!10846-111E9;0.055014!10848-111F2;0.102931!10845-111E8;0.663915!10857-111G2;0.0793691!10858-111G3;0.0854935!10156-103A3;0.267854!11901-125F2;0.764502!11902-125F3;0.038093!11903-125F4;0.292989!10689-109F5;0.329916!10648-109A9;0.589236!10784-110H1;0.015103!10744-110C6;0.601877!10772-110F7;0.650519!10474-106I6;0.736456!10600-108E6;0.864523!10684-109E9;0.630462!12226-129F3;0.622059!12227-129F4;0.264562!10508-107D4;0.00161754!10539-107G8;0.0179522!10607-108F4;0.15583!10555-107I6;0.0171165!10774-110F9;0.148369!10637-108I7;0.0149542!10663-109C6;0.253178!10728-110A8;0.308855!10729-110A9;0.184406!10430-106D7;0.300234!10730-110B1;0.631163!10813-111B3;0.00178085!10812-111B2;0.11999!10037-101F1;0.369821!10172-103C1;0.960214!10163-103B1;0.909157!10076-102A4;0.641931!10073-102A1;0.657952!10036-101E9;0.745857!10195-103E6;0.704629!10277-104E7;0.912722!10434-106E2;0.717373!10550-107I1;0.994443!10545-107H5;0.15366!10544-107H4;0.866607!10704-109H2;0.79977!10510-107D6;0.17374!10558-107I9;0.276783!10020-101D2;0.255031!10732-110B3;0.0257804!10049-101G4;0.00898245!10698-109G5;0.219474!10437-106E5;0.213469!10417-106C3;0.473504!10035-101E8;0.674132!10171-103B9;0.860535!10157-103A4;0.758543!10034-101E7;0.803726!10072-101I9;0.84945!10199-103F1;0.951977!10200-103F2;0.0281316!10697-109G4;0.0609709!10723-110A3;0.672851!10179-103C8;0.568359!10160-103A7;0.810346!10180-103C9;0.438383!10162-103A9;0.730527!10021-101D3;0.248859!10840-111E3;8.72976e-05!10706-109H4;0.760782!10033-101E6;0.515962!10032-101E5;0.825989!10490-107B4;0.68842!10439-106E7;0.0714717!10022-101D4;0.535956!10176-103C5;0.00525724!10469-106I1;0.912947!10067-101I4;0.949806!10411-106B6;0.0935231!10471-106I3;0.426508!10030-101E3;0.95459!10475-106I7;0.250874!10787-110H4;0.0282314!10477-106I9;0.719331!10695-109G2;0.355165!11771-123I7;0.529609!11772-123I8;0.594536!11773-123I9;0.0988969!10093-102C3;0.000815402!10442-106F1;0.0195672!10442-106F1;0.297281!10201-103F3;0.502489!10639-108I9;0.124434!11843-124H7;0.836273!11841-124H5;0.132757!10693-109F9;0.091752!10436-106E4;0.336251!10483-107A6;0.675351!10282-104F3;0.646684!10023-101D5;0.63283!10066-101I3;0.217108!10065-101I2;0.153813!10800-110I8;0.0291296!10610-108F7;0.0932505!10841-111E4;0.0569666!10541-107H1;0.199643!10842-111E5;0.0649897!10562-108A4;0.0129856!10024-101D6;0.169774!10064-101I1;0.0578308!10609-108F6;0.2368!10048-101G3;0.0112184!10781-110G7;0.00334062!10181-103D1;1.16174e-05!10159-103A6;0.460116!10056-101H2;0.20544!10737-110B8;0.487411!10025-101D7;0.300809!10044-101F8;0.00468656!10424-106D1;0.000536786!10463-106H4;0.878923!10616-108G4;0.445213!10486-107A9;0.430442!10062-101H8;0.577598!10202-103F4;0.0422666!10158-103A5;0.0174383!10441-106E9;0.262495!10031-101E4;0.928313!10063-101H9;0.758478!10063-101H9;0.76067!11763-123H8;0.172827!11765-123I1;0.807976!11768-123I4;0.190155!10807-111A6;0.167581!10790-110H7;0.239962!10798-110I6;0.320513!10786-110H3;0.437435!10591-108D6;0.393572!10593-108D8;0.312865!10590-108D5;0.8639!10026-101D8;0.239988!10096-102C6;0.495811!10168-103B6;0.0896408!10154-103A1;0.778054!10209-103G2;0.476663!10061-101H7;0.0639473!10027-101D9;0.0905191!10043-101F7;0.000405334!10783-110G9;8.35978e-05!10028-101E1;0.159514!10060-101H6;0.0068531!10203-103F5;0.0546123!10059-101H5;0.0777864!10047-101G2;0.0952224!10029-101E2;0.0075495!10058-101H4;0.0120023!10418-106C4;0.053535!10492-107B6;0.79331!10694-109G1;0.820203!10797-110I5;0.510422!10057-101H3;0.87303!10100-102D1;0.128172!10055-101H1;0.0208817!10204-103F6;0.0179987!10191-103E2;0.000223014!10563-108A5;0.0162446
|name=motif_GANACT
|name=motif_GANACT
|tomtom_result=Six4#MA0204.1;1;0.00363747;1.73144;1;5;GAAACT;TGATAC;+!STAT1#MA0137.1;7;0.00494498;2.35381;1;6;GAAACT;GGAAAACGAAACTG;+!so#MA0246.1;1;0.0158692;7.55374;1;5;GAAACT;TGATAC;+
}}
}}

Latest revision as of 12:45, 7 September 2012

Full Name: motif_GANACT

Motif matrix
POACGT
0100160320
0216032000
034008400840084008
0416032000
0501603200
0600016032

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Six4#MA0204.110.003637471.7314415GAAACTTGATAC+
STAT1#MA0137.170.004944982.3538116GAAACTGGAAAACGAAACTG+
so#MA0246.110.01586927.5537415GAAACTTGATAC+
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