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MacroAPE 1083:Motif GACNCT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;13136;0!02;13136;0;0;0!03;0;13136;0;0!04;3284;3284;3284;3284!05;0;13136;0;0!06;0;0;0;13136 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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766!10788-110H5;0.935733!10792-110H9;0.979082!10765-110E9;0.576064!10829-111D1;0.742119!10830-111D2;0.857698!10831-111D3;0.610097!10832-111D4;0.587874!10833-111D5;0.712166!10764-110E8;0.875234!10770-110F5;0.880272!10399-106A3;0.949412!10400-106A4;0.715509!10405-106A9;0.766996!10834-111D6;0.636138!10835-111D7;0.940989!10836-111D8;0.879629!10837-111D9;0.501615!10699-109G6;0.719293!10802-111A1;0.243716!10796-110I4;0.898742!10010-101C1;0.336301!10810-111A9;0.501563!10421-106C7;0.723024!10708-109H6;0.62584!12235-129G3;0.546153!12236-129G4;0.592773!12237-129G5;0.585108!10167-103B5;0.837635!10151-102I7;0.89863!10428-106D5;0.825455!10795-110I3;0.535024!10805-111A4;0.923847!10052-101G7;0.605491!10189-103D9;0.833323!10589-108D4;0.581946!10425-106D2;0.69032!10427-106D4;0.735413!10702-109G9;0.607565!10432-106D9;0.939874!10496-107C1;0.732435!10718-109I7;0.248537!10011-101C2;0.819315!10053-101G8;0.733901!10686-109F2;0.623963!10084-102B3;0.229249!10012-101C3;0.837013!10085-102B4;0.812926!10482-107A5;0.776021!10419-106C5;0.773807!10080-102A8;0.906315!10760-110E4;0.685811!10709-109H7;0.536573!10710-109H8;0.694954!10703-109H1;0.538135!10719-109I8;0.267603!10642-109A3;0.939811!10177-103C6;0.814571!10164-103B2;0.992647!10173-103C2;0.922975!10166-103B4;0.847676!10083-102B2;0.81778!10188-103D8;0.709957!10552-107I3;0.798167!10553-107I4;0.791992!10013-101C4;0.735416!10536-107G5;0.610297!10618-108G6;0.0953811!10423-106C9;0.633702!10785-110H2;0.923867!12238-129G6;0.824454!12239-129G7;0.35772!12240-129G8;0.346231!10416-106C2;0.560267!10801-110I9;0.992747!10766-110F1;0.915244!10824-111C5;0.514102!10825-111C6;0.691231!10826-111C7;0.640222!10454-106G4;0.602272!10409-106B4;0.529405!10638-108I8;0.727998!10636-108I6;0.920101!10513-107D9;0.493216!10420-106C6;0.580382!10082-102B1;0.527122!10014-101C5;0.532901!10070-101I7;0.771044!10452-106G2;0.528516!10453-106G3;0.879825!10449-106F8;0.895712!10042-101F6;0.8361!10069-101I6;0.92048!10193-103E4;0.333379!10631-108I1;0.810098!10438-106E6;0.731894!10488-107B2;0.659154!10196-103E7;0.883698!10071-101I8;0.609369!10071-101I8;0.553555!10041-101F5;0.700257!10451-106G1;0.744842!10450-106F9;0.717657!10604-108F1;0.968127!10605-108F2;0.689501!10606-108F3;0.8855!10603-108E9;0.910515!10497-107C2;0.503083!10448-106F7;0.377736!10643-109A4;0.976984!10426-106D3;0.105926!10431-106D8;0.871216!10197-103E8;0.510194!10443-106F2;0.625215!10815-111B5;0.663271!10816-111B6;0.443645!10817-111B7;0.458303!10015-101C6;0.450139!10410-106B5;0.581318!10054-101G9;0.796658!10758-110E2;0.603194!10711-109H9;0.221973!10040-101F4;0.869428!10470-106I2;0.807397!10415-106C1;0.67066!10198-103E9;0.743868!10614-108G2;0.730979!10612-108F9;0.434208!10549-107H9;0.571468!10615-108G3;0.925594!10487-107B1;0.956572!10433-106E1;0.416305!10688-109F4;0.618078!10444-106F3;0.849498!10444-106F3;0.997608!10485-107A8;0.960374!10413-106B8;0.589065!10175-103C4;0.454583!10161-103A8;0.676169!12131-128D7;0.751073!10624-108H3;0.81855!10712-109I1;0.554685!10205-103F7;0.995963!10206-103F8;0.471046!10207-103F9;0.393405!10050-101G5;0.520908!10051-101G6;0.640576!10016-101C7;0.568909!10046-101G1;0.500151!10778-110G4;0.16809!10633-108I3;0.941474!10818-111B8;0.42108!10819-111B9;0.329463!10820-111C1;0.287432!10484-107A7;0.31938!10808-111A7;0.853335!10169-103B7;0.517703!10153-102I9;0.82956!13425-144D5;0.877092!13433-144E4;0.72895!13437-144E8;0.880112!11904-125F5;0.738025!11905-125F6;0.90181!10039-101F3;0.674488!10791-110H8;0.827254!10017-101C8;0.632083!10045-101F9;0.710311!10509-107D5;0.29606!10839-111E2;0.505854!10692-109F8;0.371235!10079-102A7;0.383596!10078-102A6;0.536947!10721-110A1;0.575537!10569-108B2;0.952464!10570-108B3;0.652402!10571-108B4;0.7839!10647-109A8;0.582132!10752-110D5;0.786032!10782-110G8;0.662109!10726-110A6;0.897943!10018-101C9;0.49671!10086-102B5;0.865603!10182-103D2;0.945283!10165-103B3;0.815593!10499-107C4;0.895419!10408-106B3;0.244906!10019-101D1;0.972225!10068-101I5;0.996901!10075-102A3;0.385297!10077-102A5;0.815237!10727-110A7;0.867638!10775-110G1;0.606178!10412-106B7;0.63991!12231-129F8;0.472562!12232-129F9;0.819388!12233-129G1;0.889618!12234-129G2;0.754709!10414-106B9;0.896613!10170-103B8;0.664092!10183-103D3;0.847735!10150-102I6;0.832744!10174-103C3;0.784168!10155-103A2;0.959516!10038-101F2;0.989079!10838-111E1;0.914405!10759-110E3;0.897333!10514-107E1;0.443977!10465-106H6;0.237679!10691-109F7;0.291957!10843-111E6;0.930363!10844-111E7;0.452045!11747-123G1;0.785137!11748-123G2;0.767887!11749-123G3;0.779481!11750-123G4;0.393825!11751-123G5;0.438302!11840-124H4;0.524936!11752-123G6;0.855035!11753-123G7;0.565235!11754-123G8;0.430104!11755-123G9;0.964573!11756-123H1;0.242341!11833-124G6;0.896348!11760-123H5;0.994895!11836-124G9;0.962155!11758-123H3;0.845758!11835-124G8;0.798421!11762-123H7;0.865163!11838-124H2;0.77467!11757-123H2;0.950828!11759-123H4;0.863348!11761-123H6;0.911565!11842-124H6;0.643478!11837-124H1;0.959794!10568-108B1;0.631321!13230-141I8;0.797236!13231-141I9;0.855128!10696-109G3;0.957254!10493-107B7;0.324472!10494-107B8;0.892164!10850-111F4;0.340124!10851-111F5;0.232559!10852-111F6;0.913287!10853-111F7;0.864038!10854-111F8;0.853368!10855-111F9;0.90957!10856-111G1;0.969569!10847-111F1;0.278618!10846-111E9;0.364251!10848-111F2;0.579264!10845-111E8;0.329487!10857-111G2;0.770636!10858-111G3;0.661697!10156-103A3;0.576505!11901-125F2;0.820377!11902-125F3;0.740797!11903-125F4;0.799882!10689-109F5;0.8436!10648-109A9;0.813081!10784-110H1;0.387102!10744-110C6;0.710181!10772-110F7;0.777373!10474-106I6;0.834313!10600-108E6;0.242916!10684-109E9;0.446983!12226-129F3;0.0327683!12227-129F4;0.267344!10508-107D4;0.824409!10539-107G8;0.878903!10607-108F4;0.781275!10555-107I6;0.940408!10774-110F9;0.641754!10637-108I7;0.830124!10663-109C6;0.789996!10728-110A8;0.919274!10729-110A9;0.846892!10430-106D7;0.827402!10730-110B1;0.533957!10813-111B3;0.830442!10812-111B2;0.754157!10037-101F1;0.596704!10172-103C1;0.924976!10163-103B1;0.978302!10076-102A4;0.710458!10073-102A1;0.765145!10036-101E9;0.713978!10195-103E6;0.777441!10277-104E7;0.814934!10434-106E2;0.87831!10550-107I1;0.649756!10545-107H5;0.659749!10544-107H4;0.944224!10704-109H2;0.705607!10510-107D6;0.515009!10558-107I9;0.829946!10020-101D2;0.692212!10732-110B3;0.49838!10049-101G4;0.747959!10698-109G5;0.369988!10437-106E5;0.781762!10417-106C3;0.0517218!10035-101E8;0.821417!10171-103B9;0.804793!10157-103A4;0.835313!10034-101E7;0.755387!10072-101I9;0.843708!10199-103F1;0.703788!10200-103F2;0.90134!10697-109G4;0.467716!10723-110A3;0.414624!10179-103C8;0.406268!10160-103A7;0.543321!10180-103C9;0.781872!10162-103A9;0.901953!10021-101D3;0.906093!10840-111E3;0.283949!10706-109H4;0.568081!10033-101E6;0.612363!10032-101E5;0.88817!10490-107B4;0.791695!10439-106E7;0.295227!10022-101D4;0.409122!10176-103C5;0.575073!10469-106I1;0.804688!10067-101I4;0.736275!10411-106B6;0.417487!10471-106I3;0.474078!10030-101E3;0.869501!10475-106I7;0.964978!10787-110H4;0.778722!10477-106I9;0.679746!10695-109G2;0.330853!11771-123I7;0.688042!11772-123I8;0.804104!11773-123I9;0.823891!10093-102C3;0.938041!10442-106F1;0.576474!10442-106F1;0.764974!10201-103F3;0.81714!10639-108I9;0.686389!11843-124H7;0.419773!11841-124H5;0.689144!10693-109F9;0.575346!10436-106E4;0.594789!10483-107A6;0.381781!10282-104F3;0.420452!10023-101D5;0.38875!10066-101I3;0.392376!10065-101I2;0.286316!10800-110I8;0.338367!10610-108F7;0.839277!10841-111E4;0.605187!10541-107H1;0.755009!10842-111E5;0.954494!10562-108A4;0.972977!10024-101D6;0.514129!10064-101I1;0.916356!10609-108F6;0.559464!10048-101G3;0.260171!10781-110G7;0.524678!10181-103D1;0.707557!10159-103A6;0.916649!10056-101H2;0.894659!10737-110B8;0.600463!10025-101D7;0.825631!10044-101F8;0.817337!10424-106D1;0.787445!10463-106H4;0.687954!10616-108G4;0.966823!10486-107A9;0.53591!10062-101H8;0.486093!10202-103F4;0.592266!10158-103A5;0.576439!10441-106E9;0.843487!10031-101E4;0.869228!10063-101H9;0.766173!10063-101H9;0.800114!11763-123H8;0.575368!11765-123I1;0.813549!11768-123I4;0.807057!10807-111A6;0.885522!10790-110H7;0.466968!10798-110I6;0.654224!10786-110H3;0.0113615!10591-108D6;0.778674!10593-108D8;0.546037!10590-108D5;0.630049!10026-101D8;0.910199!10096-102C6;0.82023!10168-103B6;0.274597!10154-103A1;0.817934!10209-103G2;0.911422!10061-101H7;0.41403!10027-101D9;0.33366!10043-101F7;0.720602!10783-110G9;0.5529!10028-101E1;0.74965!10060-101H6;0.58567!10203-103F5;0.290205!10059-101H5;0.505381!10047-101G2;0.271349!10029-101E2;0.652201!10058-101H4;0.679022!10418-106C4;0.368875!10492-107B6;0.802509!10694-109G1;0.94943!10797-110I5;0.921463!10057-101H3;0.981511!10100-102D1;0.412377!10055-101H1;0.526185!10204-103F6;0.544682!10191-103E2;0.8268!10563-108A5;0.495367
|name=motif_GACNCT
|name=motif_GACNCT
|tomtom_result=ARG80#MA0271.1;1;0.00273556;1.30213;1;5;GACACT;AGACGC;+!NRG1#MA0347.1;7;0.00457525;2.17782;1;6;GACACT;TGCGATGGACCCTGATCTAG;-!ARG81#MA0272.1;2;0.00538378;2.56268;1;6;GACACT;GTGACTCT;+
}}
}}

Latest revision as of 13:43, 7 September 2012

Full Name: motif_GACNCT

Motif matrix
POACGT
0100131360
0213136000
0301313600
043284328432843284
0501313600
0600013136

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARG80#MA0271.110.002735561.3021315GACACTAGACGC+
NRG1#MA0347.170.004575252.1778216GACACTTGCGATGGACCCTGATCTAG-
ARG81#MA0272.120.005383782.5626816GACACTGTGACTCT+
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