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MacroAPE 1083:STCGWAG,motif238: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;237.188;539.189;601.244;1.379!2;362.677;1.379;139.279;875.665!3;1.379;1156.981;1.379;219.261!4;1.379;199.955;1176.287;1.379!5;645.372;2.758;...")
 
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13231-141I9;0.184008!10696-109G3;0.161656!10493-107B7;0.114718!10494-107B8;0.880404!10850-111F4;0.26669!10851-111F5;0.647229!10852-111F6;0.745714!10853-111F7;0.856156!10854-111F8;0.406551!10855-111F9;0.710035!10856-111G1;0.421992!10847-111F1;0.478239!10846-111E9;0.886287!10848-111F2;0.143722!10845-111E8;0.132901!10857-111G2;0.245966!10858-111G3;0.441901!10156-103A3;0.0917317!11901-125F2;0.213563!11902-125F3;0.157555!11903-125F4;0.218186!10689-109F5;0.185779!10648-109A9;0.633385!10784-110H1;0.0793892!10744-110C6;0.275835!10772-110F7;0.378234!10474-106I6;0.167313!10600-108E6;0.468709!10684-109E9;0.926905!12226-129F3;0.392808!12227-129F4;0.296321!10508-107D4;0.0355261!10539-107G8;0.0868655!10607-108F4;0.240176!10555-107I6;0.44279!10774-110F9;0.35088!10637-108I7;0.311453!10663-109C6;0.406087!10728-110A8;0.608434!10729-110A9;0.977594!10430-106D7;0.312049!10730-110B1;0.242182!10813-111B3;0.72034!10812-111B2;0.110819!10037-101F1;0.679484!10172-103C1;0.1885!10163-103B1;0.13334!10076-102A4;0.206339!10073-102A1;0.256236!10036-101E9;0.11876!10195-103E6;0.25788!10277-104E7;0.222194!10434-106E2;0.275315!10550-107I1;0.241122!10545-107H5;0.244508!10544-107H4;0.112123!10704-109H2;0.236098!10510-107D6;0.492233!10558-107I9;0.179167!10020-101D2;0.672212!10732-110B3;0.238597!10049-101G4;0.607125!10698-109G5;0.268628!10437-106E5;0.453998!10417-106C3;0.936661!10035-101E8;0.165662!10171-103B9;0.200315!10157-103A4;0.234563!10034-101E7;0.210885!10072-101I9;0.219956!10199-103F1;0.0933262!10200-103F2;0.746768!10697-109G4;0.194786!10723-110A3;0.513512!10179-103C8;0.128752!10160-103A7;0.0802332!10180-103C9;0.0533818!10162-103A9;0.192551!10021-101D3;0.0752145!10840-111E3;0.569991!10706-109H4;0.19906!10033-101E6;0.866059!10032-101E5;0.151726!10490-107B4;0.239148!10439-106E7;0.2546!10022-101D4;0.826076!10176-103C5;0.259264!10469-106I1;0.187785!10067-101I4;0.915327!10411-106B6;0.223291!10471-106I3;0.390495!10030-101E3;0.0392425!10475-106I7;0.187701!10787-110H4;0.794656!10477-106I9;0.798844!10695-109G2;0.116858!11771-123I7;0.024093!11772-123I8;0.670263!11773-123I9;0.304875!10093-102C3;0.521653!10442-106F1;0.702538!10442-106F1;0.128852!10201-103F3;0.169341!10639-108I9;0.283158!11843-124H7;0.727833!11841-124H5;0.0660509!10693-109F9;0.218353!10436-106E4;0.140058!10483-107A6;0.473065!10282-104F3;0.284719!10023-101D5;0.195031!10066-101I3;0.257231!10065-101I2;0.213063!10800-110I8;0.11218!10610-108F7;0.885853!10841-111E4;0.61365!10541-107H1;0.457886!10842-111E5;0.904931!10562-108A4;0.443158!10024-101D6;0.724085!10064-101I1;0.491488!10609-108F6;0.35802!10048-101G3;0.840045!10781-110G7;0.16021!10181-103D1;0.0619804!10159-103A6;0.170004!10056-101H2;0.168881!10737-110B8;0.115705!10025-101D7;0.222444!10044-101F8;0.571898!10424-106D1;0.446565!10463-106H4;0.163161!10616-108G4;0.262374!10486-107A9;0.942851!10062-101H8;0.331908!10202-103F4;0.150071!10158-103A5;0.362325!10441-106E9;0.153159!10031-101E4;0.538017!10063-101H9;0.280885!10063-101H9;0.108599!11763-123H8;0.182604!11765-123I1;0.387367!11768-123I4;0.457242!10807-111A6;0.69802!10790-110H7;0.980968!10798-110I6;0.990672!10786-110H3;0.463381!10591-108D6;0.907332!10593-108D8;0.538879!10590-108D5;0.209582!10026-101D8;0.662051!10096-102C6;0.495722!10168-103B6;0.985756!10154-103A1;0.1987!10209-103G2;0.193936!10061-101H7;0.195531!10027-101D9;0.189734!10043-101F7;0.573472!10783-110G9;0.759718!10028-101E1;0.689984!10060-101H6;0.737824!10203-103F5;0.176924!10059-101H5;0.312742!10047-101G2;0.430314!10029-101E2;0.553494!10058-101H4;0.442769!10418-106C4;0.18805!10492-107B6;0.846387!10694-109G1;0.500279!10797-110I5;0.115879!10057-101H3;0.319527!10100-102D1;0.227599!10055-101H1;0.199684!10204-103F6;0.316768!10191-103E2;0.274967!10563-108A5;0.402291
|name=STCGWAG,motif238,CNhs11974,T:1379.0(25.38%),B:13591.6(18.19%),P:1e-39
|name=STCGWAG,motif238,CNhs11974,T:1379.0(25.38%),B:13591.6(18.19%),P:1e-39
|tomtom_result=XBP1#MA0414.1;0;0.008974;4.27163;1;7;GTCGTAG;CTCGAGA;+!YNR063W#MA0432.1;-1;0.0161034;7.66521;1;6;GTCGTAG;TCGGAGAT;+
}}
}}

Latest revision as of 14:12, 7 September 2012

Full Name: STCGWAG,motif238,CNhs11974,T:1379.0(25.38%),B:13591.6(18.19%),P:1e-39

Motif matrix
POACGT
1237.188539.189601.2441.379
2362.6771.379139.279875.665
31.3791156.9811.379219.261
41.379199.9551176.2871.379
5645.3722.75830.338700.532
61374.8631.3791.3791.379
759.297234.43976.332108.941

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
XBP1#MA0414.100.0089744.2716317GTCGTAGCTCGAGA+
YNR063W#MA0432.1-10.01610347.6652116GTCGTAGTCGGAGAT+
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