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MacroAPE 1083:CNhs11380 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;32.458982321205006;8.536624362419955;4.975954475841738;1.0284388405332994!2;28.941614739458984;13.424364142807589;3.576853271157745;1.057167...")
 
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106D6;0.445603!10464-106H5;0.319319!10827-111C8;0.30081!10789-110H6;0.223691!10828-111C9;0.355458!10788-110H5;0.0618153!10792-110H9;0.362014!10765-110E9;0.391359!10829-111D1;0.348929!10830-111D2;0.355731!10831-111D3;0.100751!10832-111D4;0.368717!10833-111D5;0.586067!10764-110E8;0.390494!10770-110F5;0.446797!10399-106A3;0.665021!10400-106A4;0.205806!10405-106A9;0.239556!10834-111D6;0.326528!10835-111D7;0.551916!10836-111D8;0.106153!10837-111D9;0.173963!10699-109G6;0.206843!10802-111A1;0.445469!10796-110I4;0.234791!10010-101C1;0.277325!10810-111A9;0.235373!10421-106C7;0.414389!10708-109H6;0.106537!12235-129G3;0.027903!12236-129G4;0.481808!12237-129G5;0.00430262!10167-103B5;0.512513!10151-102I7;0.000891762!10428-106D5;0.00168417!10795-110I3;0.30509!10805-111A4;0.175181!10052-101G7;0.224224!10189-103D9;0.617685!10589-108D4;0.0786038!10425-106D2;0.456217!10427-106D4;0.140581!10702-109G9;0.415701!10432-106D9;0.916641!10496-107C1;0.0842978!10718-109I7;0.223165!10011-101C2;0.285141!10053-101G8;0.306405!10686-109F2;0.202806!10084-102B3;0.0871507!10012-101C3;0.000308214!10085-102B4;0.000123587!10482-107A5;0.00721924!10419-106C5;0.239596!10080-102A8;0.715478!10760-110E4;0.768383!10709-109H7;0.19956!10710-109H8;0.137674!10703-109H1;0.902885!10719-109I8;0.864331!10642-109A3;0.31667!10177-103C6;0.841117!10164-103B2;0.000609875!10173-103C2;0.000583212!10166-103B4;0.0162304!10083-102B2;0.0225406!10188-103D8;0.00497272!10552-107I3;0.000198865!10553-107I4;0.312271!10013-101C4;0.481691!10536-107G5;0.233976!10618-108G6;0.0518581!10423-106C9;0.0148575!10785-110H2;0.0346683!12238-129G6;0.0218607!12239-129G7;0.728747!12240-129G8;0.626337!10416-106C2;0.366645!10801-110I9;0.665448!10766-110F1;0.0962611!10824-111C5;0.264673!10825-111C6;0.0492139!10826-111C7;0.046704!10454-106G4;0.0476284!10409-106B4;0.24485!10638-108I8;0.174997!10636-108I6;0.00344714!10513-107D9;0.0388485!10420-106C6;0.18291!10082-102B1;0.749396!10014-101C5;0.449736!10070-101I7;0.176326!10452-106G2;0.0560705!10453-106G3;0.598033!10449-106F8;0.857105!10042-101F6;0.950845!10069-101I6;0.0026988!10193-103E4;0.0689839!10631-108I1;7.65364e-05!10438-106E6;0.756961!10488-107B2;0.642423!10196-103E7;0.174493!10071-101I8;0.829322!10071-101I8;0.00839374!10041-101F5;0.00246135!10451-106G1;0.0120996!10450-106F9;0.251496!10604-108F1;0.905294!10605-108F2;0.0344381!10606-108F3;0.00789106!10603-108E9;0.0212492!10497-107C2;0.108899!10448-106F7;0.109132!10643-109A4;0.00459812!10426-106D3;0.11742!10431-106D8;0.223511!10197-103E8;0.107191!10443-106F2;0.18471!10815-111B5;0.00506786!10816-111B6;0.328967!10817-111B7;0.301476!10015-101C6;0.272108!10410-106B5;0.222523!10054-101G9;0.158453!10758-110E2;0.00687078!10711-109H9;0.325827!10040-101F4;0.0422838!10470-106I2;0.000338481!10415-106C1;0.0332705!10198-103E9;0.00027735!10614-108G2;0.183016!10612-108F9;0.000104216!10549-107H9;0.388136!10615-108G3;0.882604!10487-107B1;0.599927!10433-106E1;0.0202269!10688-109F4;0.00747488!10444-106F3;0.401538!10444-106F3;0.2151!10485-107A8;0.223406!10413-106B8;0.304869!10175-103C4;0.00845532!10161-103A8;0.000179214!12131-128D7;0.00525253!10624-108H3;0.598542!10712-109I1;0.722839!10205-103F7;0.953718!10206-103F8;0.0293001!10207-103F9;0.0409229!10050-101G5;0.636707!10051-101G6;0.278283!10016-101C7;0.237074!10046-101G1;0.115272!10778-110G4;0.0343045!10633-108I3;0.58043!10818-111B8;0.303909!10819-111B9;0.1715!10820-111C1;0.130744!10484-107A7;0.211842!10808-111A7;0.266823!10169-103B7;0.696101!10153-102I9;0.000552533!13425-144D5;0.00215304!13433-144E4;0.725655!13437-144E8;0.87912!11904-125F5;0.991329!11905-125F6;0.248122!10039-101F3;0.14584!10791-110H8;0.000661986!10017-101C8;0.425294!10045-101F9;0.97967!10509-107D5;0.366438!10839-111E2;0.0545973!10692-109F8;0.490332!10079-102A7;0.0139682!10078-102A6;0.111818!10721-110A1;0.124718!10569-108B2;0.363691!10570-108B3;0.942884!10571-108B4;0.955331!10647-109A8;0.767035!10752-110D5;0.223929!10782-110G8;0.0639179!10726-110A6;0.395256!10018-101C9;0.073147!10086-102B5;0.586754!10182-103D2;0.630403!10165-103B3;0.000792822!10499-107C4;0.00134467!10408-106B3;0.339249!10019-101D1;0.0495058!10068-101I5;0.700263!10075-102A3;0.323018!10077-102A5;0.9606!10727-110A7;0.676759!10775-110G1;0.0766325!10412-106B7;0.364468!12231-129F8;0.239501!12232-129F9;0.409259!12233-129G1;0.387812!12234-129G2;0.15058!10414-106B9;0.26579!10170-103B8;0.801277!10183-103D3;0.000624771!10150-102I6;0.000281821!10174-103C3;0.000772792!10155-103A2;0.00816615!10038-101F2;0.00485287!10838-111E1;0.000650693!10759-110E3;0.983139!10514-107E1;0.430446!10465-106H6;0.00158203!10691-109F7;0.0101124!10843-111E6;5.90647e-07!10844-111E7;0.539714!11747-123G1;0.527136!11748-123G2;0.565293!11749-123G3;0.638214!11750-123G4;0.659262!11751-123G5;0.21457!11840-124H4;0.207693!11752-123G6;0.266298!11753-123G7;0.395717!11754-123G8;0.857611!11755-123G9;0.464316!11756-123H1;0.594341!11833-124G6;0.818232!11760-123H5;0.440904!11836-124G9;0.627707!11758-123H3;0.110545!11835-124G8;0.918008!11762-123H7;0.590378!11838-124H2;0.182908!11757-123H2;0.497927!11759-123H4;0.308555!11761-123H6;0.905072!11842-124H6;0.459895!11837-124H1;0.855798!10568-108B1;0.494449!13230-141I8;0.854722!13231-141I9;0.278462!10696-109G3;0.506636!10493-107B7;0.839708!10494-107B8;1.11581e-06!10850-111F4;0.12358!10851-111F5;0.0119193!10852-111F6;0.29497!10853-111F7;0.0923054!10854-111F8;0.00119108!10855-111F9;0.640477!10856-111G1;0.466872!10847-111F1;0.585672!10846-111E9;0.0759606!10848-111F2;0.0770221!10845-111E8;0.100793!10857-111G2;0.493255!10858-111G3;0.0480029!10156-103A3;0.0469475!11901-125F2;0.00098027!11902-125F3;0.43609!11903-125F4;0.228975!10689-109F5;0.390917!10648-109A9;0.000352148!10784-110H1;0.347319!10744-110C6;0.0125784!10772-110F7;0.571934!10474-106I6;0.200957!10600-108E6;0.414722!10684-109E9;0.8809!12226-129F3;0.082497!12227-129F4;0.0676949!10508-107D4;0.0230558!10539-107G8;0.335711!10607-108F4;0.149975!10555-107I6;0.761317!10774-110F9;0.229869!10637-108I7;0.715395!10663-109C6;0.432906!10728-110A8;0.804218!10729-110A9;0.557743!10430-106D7;0.563695!10730-110B1;0.138265!10813-111B3;0.113559!10812-111B2;0.442644!10037-101F1;0.445933!10172-103C1;0.000283665!10163-103B1;0.000576533!10076-102A4;0.00127484!10073-102A1;0.000225014!10036-101E9;0.00685965!10195-103E6;0.000480929!10277-104E7;0.000531582!10434-106E2;0.0170051!10550-107I1;0.00612533!10545-107H5;0.158634!10544-107H4;0.692828!10704-109H2;0.39972!10510-107D6;0.00543281!10558-107I9;0.566955!10020-101D2;0.423235!10732-110B3;0.312972!10049-101G4;0.291129!10698-109G5;0.440269!10437-106E5;0.028753!10417-106C3;0.234279!10035-101E8;0.00936388!10171-103B9;0.000447487!10157-103A4;0.000406678!10034-101E7;0.00100035!10072-101I9;0.00052577!10199-103F1;0.00492164!10200-103F2;0.403243!10697-109G4;0.0784688!10723-110A3;0.943115!10179-103C8;0.63738!10160-103A7;0.0109115!10180-103C9;0.0114279!10162-103A9;0.0366604!10021-101D3;0.0236678!10840-111E3;0.185152!10706-109H4;0.214151!10033-101E6;0.715718!10032-101E5;0.000301544!10490-107B4;0.000393388!10439-106E7;0.00652763!10022-101D4;0.319937!10176-103C5;0.246372!10469-106I1;0.000642794!10067-101I4;0.132383!10411-106B6;0.0121604!10471-106I3;0.0599867!10030-101E3;0.0431109!10475-106I7;0.0359904!10787-110H4;0.812801!10477-106I9;0.781789!10695-109G2;0.486335!11771-123I7;0.530921!11772-123I8;0.702811!11773-123I9;0.854521!10093-102C3;0.694728!10442-106F1;0.337981!10442-106F1;0.00371353!10201-103F3;0.0173547!10639-108I9;0.483831!11843-124H7;0.0213227!11841-124H5;0.00939989!10693-109F9;0.205807!10436-106E4;0.158095!10483-107A6;0.12241!10282-104F3;0.783415!10023-101D5;0.200708!10066-101I3;0.180674!10065-101I2;0.0555887!10800-110I8;0.00817219!10610-108F7;0.369156!10841-111E4;0.725159!10541-107H1;0.925356!10842-111E5;0.857528!10562-108A4;0.696884!10024-101D6;0.778778!10064-101I1;0.0805861!10609-108F6;0.0175477!10048-101G3;0.502574!10781-110G7;0.382332!10181-103D1;0.313533!10159-103A6;0.00266132!10056-101H2;0.00745576!10737-110B8;0.00162635!10025-101D7;0.387853!10044-101F8;0.762053!10424-106D1;0.944523!10463-106H4;0.431698!10616-108G4;0.0257817!10486-107A9;0.000230146!10062-101H8;0.0414099!10202-103F4;0.0223662!10158-103A5;0.221243!10441-106E9;0.0204477!10031-101E4;0.508913!10063-101H9;0.000610613!10063-101H9;0.00950218!11763-123H8;0.000354264!11765-123I1;0.296692!11768-123I4;0.367312!10807-111A6;0.737011!10790-110H7;0.807482!10798-110I6;0.27528!10786-110H3;0.560881!10591-108D6;0.147693!10593-108D8;0.11738!10590-108D5;0.0805012!10026-101D8;0.0968075!10096-102C6;0.606725!10168-103B6;0.586912!10154-103A1;0.00197881!10209-103G2;0.00206624!10061-101H7;0.10072!10027-101D9;0.0106748!10043-101F7;0.296967!10783-110G9;0.144615!10028-101E1;0.202268!10060-101H6;0.737716!10203-103F5;0.143897!10059-101H5;0.0503463!10047-101G2;0.0736771!10029-101E2;0.335292!10058-101H4;0.433332!10418-106C4;0.0301143!10492-107B6;0.150988!10694-109G1;0.0437102!10797-110I5;0.928194!10057-101H3;0.0415092!10100-102D1;0.0891732!10055-101H1;0.394669!10204-103F6;0.0761441!10191-103E2;0.84436!10563-108A5;0.0542381
|name=CNhs11380_bl_f1
|name=CNhs11380_bl_f1
|tomtom_result=NR2F1#MA0017.1;2;0.00585585;2.78738;1;12;AAGTCTGCTCTT;TGACCTTTGAACCT;+!HNF4A#MA0114.1;2;0.00769042;3.66064;1;11;AAGTCTGCTCTT;TGACCTTTGGCCT;-!SOK2#MA0385.1;-1;0.00798978;3.80314;1;11;AAGTCTGCTCTT;TGCCTGCAGGT;-!PPARG::RXRA#MA0065.2;2;0.00950472;4.52425;1;12;AAGTCTGCTCTT;TGACCTTTGCCCTAC;-!PHD1#MA0355.1;-2;0.0127026;6.04645;1;10;AAGTCTGCTCTT;ACCTGCAGCA;+!MAC1#MA0326.1;-3;0.0182264;8.67579;1;8;AAGTCTGCTCTT;TTTGCTCA;+
}}
}}

Latest revision as of 14:30, 7 September 2012

Full Name: CNhs11380_bl_f1

Motif matrix
POACGT
132.4589823212050068.5366243624199554.9759544758417381.0284388405332994
228.94161473945898413.4243641428075893.5768532711577451.0571678465756753
314.03502414638007814.12023421820652318.84474163541340.0
44.38849529963869910.1548848603841129.41214256505985223.044477274917334
50.039.694876305897660.07.30512369410235
60.00.32687461975766840.046.67312538024233
71.0209129289976360.396802119994223945.5822849510081340.0
80.042.645608378923310.04.354391621076684
911.84972457443240.01.974602362451245933.175673063116356
106.15560092215069328.123443121572868.973164743616833.747791212659621
110.3675791281495937610.94109881964551810.84591045642438624.845411595780508
129.8046001281997277.0235399134133468.24367766874790721.92818228963902

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NR2F1#MA0017.120.005855852.78738112AAGTCTGCTCTTTGACCTTTGAACCT+
HNF4A#MA0114.120.007690423.66064111AAGTCTGCTCTTTGACCTTTGGCCT-
SOK2#MA0385.1-10.007989783.80314111AAGTCTGCTCTTTGCCTGCAGGT-
PPARG::RXRA#MA0065.220.009504724.52425112AAGTCTGCTCTTTGACCTTTGCCCTAC-
PHD1#MA0355.1-20.01270266.04645110AAGTCTGCTCTTACCTGCAGCA+
MAC1#MA0326.1-30.01822648.6757918AAGTCTGCTCTTTTTGCTCA+
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