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MacroAPE 1083:Motif477: Difference between revisions

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Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;23972;0;0;0!02;0;0;23972;0!03;0;0;23972;0!04;23972;0;0;0!05;23972;0;0;0!06;0;0;23972;0!07;0;23972;0;0 |macroape_1083_sample_pvalues=11376-..."
 
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1290-117A3;0.00226882!11367-117I8;0.0269014!11439-118H8;0.286538!11541-120B2;0.0256547!11621-122B1;0.0246117!11212-116A6;0.000187769!11466-119B8;0.0111277!11368-117I9;0.00404316!11440-118H9;0.0309218!11532-120A2;0.000794511!11693-123A1;0.0721141!11292-117A5;0.020154!11369-118A1;0.0195375!11441-118I1;0.782465!10007-101B4;0.0181969!11520-119H8;0.625268!11600-120H7;0.121159!11681-122H7;0.240341!11216-116B1;0.0721576!12179-129A1;0.0425328!12180-129A2;1.47913e-12!12181-129A3;9.2806e-13!12176-128I7;3.9794e-13!12177-128I8;3.91794e-13!12182-129A4;1.28497e-14!12183-129A5;4.03222e-14!12184-129A6;2.37405e-13!10809-111A8;7.22845e-14!10597-108E3;1.37881e-05!10717-109I6;6.17896e-05!10455-106G5;0.00415422!10534-107G3;0.294919!10429-106D6;0.267514!10464-106H5;0.143899!10827-111C8;0.195114!10789-110H6;0.00163149!10828-111C9;1.41457e-06!10788-110H5;2.47589e-10!10792-110H9;0.0429604!10765-110E9;8.0488e-06!10829-111D1;0.00056586!10830-111D2;0.109622!10831-111D3;7.63662e-07!10832-111D4;1.17164e-07!10833-111D5;0.00770237!10764-110E8;0.0181854!10770-110F5;0.0008595!10399-106A3;3.25719e-07!10400-106A4;0.0811119!10405-106A9;0.0934427!10834-111D6;0.0856494!10835-111D7;0.00266182!10836-111D8;0.809638!10837-111D9;0.854824!10699-109G6;0.127183!10802-111A1;0.0209217!10796-110I4;0.246498!10010-101C1;0.0313561!10810-111A9;0.161009!10421-106C7;0.00119002!10708-109H6;0.0214635!12235-129G3;0.107835!12236-129G4;2.8798e-10!12237-129G5;3.93998e-09!10167-103B5;1.43159e-09!10151-102I7;0.282337!10428-106D5;0.497462!10795-110I3;0.304555!10805-111A4;0.68189!10052-101G7;1.84537e-05!10189-103D9;0.63348!10589-108D4;0.00600646!10425-106D2;0.00359952!10427-106D4;0.000134387!10702-109G9;0.0272174!10432-106D9;0.0113145!10496-107C1;0.160037!10718-109I7;0.0347224!10011-101C2;0.0156968!10053-101G8;0.720809!10686-109F2;4.31923e-15!10084-102B3;0.451912!10012-101C3;0.236267!10085-102B4;0.324483!10482-107A5;0.115686!10419-106C5;0.00702523!10080-102A8;0.0122106!10760-110E4;0.591589!10709-109H7;0.00333641!10710-109H8;0.00836637!10703-109H1;0.00233175!10719-109I8;1.17675e-05!10642-109A3;0.000331676!10177-103C6;8.16532e-06!10164-103B2;0.135798!10173-103C2;0.317263!10166-103B4;0.0490086!10083-102B2;0.13314!10188-103D8;0.0590906!10552-107I3;0.120411!10553-107I4;0.00602352!10013-101C4;0.000447049!10536-107G5;0.78088!10618-108G6;0.00972652!10423-106C9;0.0634881!10785-110H2;0.0145989!12238-129G6;0.00304656!12239-129G7;0.426415!12240-129G8;0.0146308!10416-106C2;0.212218!10801-110I9;0.00918626!10766-110F1;0.00233226!10824-111C5;0.0025852!10825-111C6;0.494917!10826-111C7;0.526301!10454-106G4;0.75191!10409-106B4;0.387624!10638-108I8;0.0223655!10636-108I6;0.0716487!10513-107D9;0.0682047!10420-106C6;0.016601!10082-102B1;0.00836237!10014-101C5;0.545236!10070-101I7;0.816017!10452-106G2;0.664168!10453-106G3;0.731868!10449-106F8;0.879923!10042-101F6;0.922814!10069-101I6;0.617656!10193-103E4;0.798765!10631-108I1;0.171513!10438-106E6;0.570348!10488-107B2;0.00955958!10196-103E7;0.0158199!10071-101I8;0.237519!10071-101I8;0.614416!10041-101F5;0.0971363!10451-106G1;0.0790819!10450-106F9;0.0494188!10604-108F1;0.00354869!10605-108F2;0.160515!10606-108F3;0.0681678!10603-108E9;0.175763!10497-107C2;0.133452!10448-106F7;0.0400155!10643-109A4;0.0148799!10426-106D3;0.00445006!10431-106D8;0.0332662!10197-103E8;0.10857!10443-106F2;0.758984!10815-111B5;0.0727058!10816-111B6;0.0361592!10817-111B7;0.0502424!10015-101C6;0.0523807!10410-106B5;0.992027!10054-101G9;1.16927e-06!10758-110E2;0.247663!10711-109H9;0.981652!10040-101F4;0.594199!10470-106I2;0.322267!10415-106C1;0.00967049!10198-103E9;0.317687!10614-108G2;0.524521!10612-108F9;1.74518e-05!10549-107H9;0.0413691!10615-108G3;0.0133914!10487-107B1;0.00133321!10433-106E1;0.0666626!10688-109F4;0.720817!10444-106F3;0.0102181!10444-106F3;0.0211539!10485-107A8;0.0364669!10413-106B8;0.0477989!10175-103C4;0.00861854!10161-103A8;0.277859!12131-128D7;0.929703!10624-108H3;2.30192e-05!10712-109I1;0.000845571!10205-103F7;0.0967024!10206-103F8;0.651289!10207-103F9;0.425205!10050-101G5;0.554056!10051-101G6;0.00422147!10016-101C7;0.204069!10046-101G1;0.357541!10778-110G4;0.584556!10633-108I3;0.506572!10818-111B8;0.00793262!10819-111B9;0.00698406!10820-111C1;0.00716642!10484-107A7;0.00950596!10808-111A7;0.000252136!10169-103B7;0.373305!10153-102I9;0.359829!13425-144D5;0.512779!13433-144E4;7.39272e-06!13437-144E8;2.02106e-06!11904-125F5;8.84725e-07!11905-125F6;0.000618551!10039-101F3;0.0412325!10791-110H8;0.386935!10017-101C8;0.00643757!10045-101F9;0.372833!10509-107D5;0.545482!10839-111E2;0.634457!10692-109F8;0.0044263!10079-102A7;0.0127408!10078-102A6;0.665876!10721-110A1;0.279136!10569-108B2;0.00175146!10570-108B3;0.000361882!10571-108B4;6.97641e-05!10647-109A8;0.0047111!10752-110D5;0.013612!10782-110G8;0.0187747!10726-110A6;0.00326303!10018-101C9;0.26996!10086-102B5;0.660373!10182-103D2;0.675226!10165-103B3;0.181826!10499-107C4;0.474321!10408-106B3;0.00476255!10019-101D1;0.0435872!10068-101I5;0.0341629!10075-102A3;0.403143!10077-102A5;0.000790424!10727-110A7;8.86393e-08!10775-110G1;0.216456!10412-106B7;0.139156!12231-129F8;0.0132806!12232-129F9;0.00326092!12233-129G1;0.219178!12234-129G2;0.00636521!10414-106B9;0.00140339!10170-103B8;0.0178535!10183-103D3;0.111244!10150-102I6;0.19171!10174-103C3;0.525522!10155-103A2;0.138833!10038-101F2;0.478922!10838-111E1;0.575833!10759-110E3;2.9545e-05!10514-107E1;0.0858711!10465-106H6;0.210763!10691-109F7;0.234999!10843-111E6;0.957171!10844-111E7;0.00457951!11747-123G1;0.000462597!11748-123G2;0.0200789!11749-123G3;0.0332041!11750-123G4;0.0397358!11751-123G5;0.00334401!11840-124H4;0.00075752!11752-123G6;0.000393!11753-123G7;0.00454887!11754-123G8;0.0364567!11755-123G9;0.0543653!11756-123H1;0.18607!11833-124G6;0.237801!11760-123H5;0.144173!11836-124G9;0.056411!11758-123H3;0.37494!11835-124G8;0.0962556!11762-123H7;0.131715!11838-124H2;0.0676419!11757-123H2;0.0753169!11759-123H4;0.0156332!11761-123H6;0.164973!11842-124H6;0.0392647!11837-124H1;0.0797497!10568-108B1;0.987222!13230-141I8;7.80582e-05!13231-141I9;0.0033169!10696-109G3;0.00148026!10493-107B7;0.237256!10494-107B8;0.00119525!10850-111F4;0.0193828!10851-111F5;0.0381014!10852-111F6;0.00662606!10853-111F7;0.0735601!10854-111F8;0.101319!10855-111F9;0.00206352!10856-111G1;4.56168e-06!10847-111F1;0.000952917!10846-111E9;0.079618!10848-111F2;0.0294855!10845-111E8;0.0607519!10857-111G2;0.0304709!10858-111G3;0.00115103!10156-103A3;0.18791!11901-125F2;0.570496!11902-125F3;0.000915853!11903-125F4;3.13833e-05!10689-109F5;0.000107991!10648-109A9;0.00121398!10784-110H1;0.0030386!10744-110C6;0.242076!10772-110F7;0.0498578!10474-106I6;0.0382924!10600-108E6;0.610733!10684-109E9;0.00127807!12226-129F3;0.0658077!12227-129F4;1.14326e-05!10508-107D4;0.334078!10539-107G8;0.00179934!10607-108F4;0.00026484!10555-107I6;0.000243029!10774-110F9;0.000174544!10637-108I7;0.0339784!10663-109C6;0.000639241!10728-110A8;0.00614833!10729-110A9;0.0095383!10430-106D7;0.0228707!10730-110B1;0.482251!10813-111B3;1.49796e-08!10812-111B2;2.2051e-05!10037-101F1;0.0059628!10172-103C1;0.346912!10163-103B1;0.190129!10076-102A4;0.749942!10073-102A1;0.176478!10036-101E9;0.0431283!10195-103E6;0.275132!10277-104E7;0.222031!10434-106E2;0.193197!10550-107I1;0.00228827!10545-107H5;0.00122628!10544-107H4;0.00363936!10704-109H2;0.0301418!10510-107D6;0.66877!10558-107I9;0.799297!10020-101D2;0.000809464!10732-110B3;0.524382!10049-101G4;0.0140343!10698-109G5;0.0148982!10437-106E5;0.0866336!10417-106C3;0.352678!10035-101E8;0.35111!10171-103B9;0.294247!10157-103A4;0.22696!10034-101E7;0.454061!10072-101I9;0.33168!10199-103F1;0.0458166!10200-103F2;0.49614!10697-109G4;0.709217!10723-110A3;0.0379725!10179-103C8;0.00224985!10160-103A7;0.0925648!10180-103C9;0.268097!10162-103A9;0.00129618!10021-101D3;0.0231291!10840-111E3;0.278792!10706-109H4;0.156898!10033-101E6;0.0368842!10032-101E5;0.336508!10490-107B4;0.266699!10439-106E7;0.00459674!10022-101D4;0.00760506!10176-103C5;0.840235!10469-106I1;0.18494!10067-101I4;0.196712!10411-106B6;0.819213!10471-106I3;1.2696e-05!10030-101E3;0.0027091!10475-106I7;0.500661!10787-110H4;0.000659141!10477-106I9;0.00181892!10695-109G2;0.00339256!11771-123I7;0.0425207!11772-123I8;4.26143e-05!11773-123I9;4.30823e-14!10093-102C3;4.46516e-07!10442-106F1;0.805122!10442-106F1;0.568215!10201-103F3;0.662873!10639-108I9;0.720132!11843-124H7;0.00150689!11841-124H5;4.24534e-05!10693-109F9;0.0305426!10436-106E4;0.00890742!10483-107A6;0.11728!10282-104F3;0.218465!10023-101D5;0.0290356!10066-101I3;0.107225!10065-101I2;0.576005!10800-110I8;0.496541!10610-108F7;0.000179443!10841-111E4;0.00259002!10541-107H1;4.94883e-06!10842-111E5;0.0226116!10562-108A4;0.000156958!10024-101D6;0.000438516!10064-101I1;0.439648!10609-108F6;0.574566!10048-101G3;0.018672!10781-110G7;0.649451!10181-103D1;0.000354033!10159-103A6;0.457013!10056-101H2;0.864972!10737-110B8;0.23518!10025-101D7;0.527859!10044-101F8;3.76278e-05!10424-106D1;0.000104377!10463-106H4;0.480903!10616-108G4;0.0125619!10486-107A9;0.482469!10062-101H8;0.0483551!10202-103F4;0.930122!10158-103A5;0.376935!10441-106E9;0.980483!10031-101E4;0.000456001!10063-101H9;0.331397!10063-101H9;0.0426449!11763-123H8;0.655449!11765-123I1;0.00335613!11768-123I4;0.00519507!10807-111A6;0.0009359!10790-110H7;7.41715e-05!10798-110I6;0.00585659!10786-110H3;0.0211353!10591-108D6;0.00223234!10593-108D8;0.000439979!10590-108D5;0.00279413!10026-101D8;0.0276548!10096-102C6;0.0157209!10168-103B6;1.57563e-09!10154-103A1;0.258305!10209-103G2;0.728663!10061-101H7;0.991507!10027-101D9;0.723456!10043-101F7;7.65844e-10!10783-110G9;4.52824e-08!10028-101E1;0.195633!10060-101H6;0.376157!10203-103F5;0.83803!10059-101H5;0.500711!10047-101G2;0.328304!10029-101E2;0.0109104!10058-101H4;0.454681!10418-106C4;0.450015!10492-107B6;0.0139032!10694-109G1;0.026139!10797-110I5;0.000551243!10057-101H3;0.0492316!10100-102D1;0.365416!10055-101H1;0.622916!10204-103F6;0.706194!10191-103E2;0.639218!10563-108A5;0.034477
|name=motif477
|name=motif477
|tomtom_result=GCR2#MA0305.1;0;3.53972e-05;0.0168491;0.0334405;7;AGGAAGC;AGGAAGC;-!GCR1#MA0304.1;0;0.000233318;0.111059;0.0882085;7;AGGAAGC;TGGAAGCC;+!SPI1#MA0080.2;0;0.000280109;0.133332;0.0882085;7;AGGAAGC;AGGAAGT;+!SPI1#MA0080.2;0;0.00125703;0.598347;0.296887;6;AGGAAGC;CGGAAG;+!ETS1#MA0098.1;0;0.00254855;1.21311;0.369225;6;AGGAAGC;CGGAAA;-!IXR1#MA0323.1;4;0.00290855;1.38447;0.369225;7;AGGAAGC;AAGCCGGAAGCGGGG;+!ELF5#MA0136.1;1;0.00305634;1.45482;0.369225;7;AGGAAGC;AAGGAAGTA;-!Stat3#MA0144.1;4;0.00312663;1.48828;0.369225;6;AGGAAGC;TTCCAGGAAG;+!EWSR1-FLI1#MA0149.1;11;0.00402702;1.91686;0.370176;7;AGGAAGC;GGAAGGAAGGAAGGAAGG;+!FEV#MA0156.1;1;0.00404937;1.9275;0.370176;7;AGGAAGC;CAGGAAAT;+!CAD1#MA0279.1;3;0.00431019;2.05165;0.370176;7;AGGAAGC;ATTAGTAAGC;+!Eip74EF#MA0026.1;1;0.00487768;2.32177;0.384005;6;AGGAAGC;CCGGAAG;+!YAP7#MA0419.1;3;0.00642008;3.05596;0.466554;7;AGGAAGC;ATTAGTAAGCA;+!che-1#MA0260.1;-2;0.00838936;3.99334;0.566116;5;AGGAAGC;GAAACC;+!ttx-3::ceh-10#MA0263.1;3;0.0124756;5.93837;0.741139;7;AGGAAGC;TTAACGAAGCCAAT;-!ELK4#MA0076.1;2;0.0125521;5.97478;0.741139;7;AGGAAGC;ACCGGAAGT;+!GABPA#MA0062.2;2;0.0133421;6.35084;0.741447;7;AGGAAGC;ACCGGAAGAG;+!GABPA#MA0062.2;1;0.0153162;7.29051;0.803865;7;AGGAAGC;CCGGAAGTGGC;+!SPIB#MA0081.1;2;0.0171236;8.15084;0.851425;5;AGGAAGC;AGAGGAA;+
}}
}}

Latest revision as of 14:47, 7 September 2012

Full Name: motif477

Motif matrix
POACGT
0123972000
0200239720
0300239720
0423972000
0523972000
0600239720
0702397200

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GCR2#MA0305.103.53972e-050.01684910.03344057AGGAAGCAGGAAGC-
GCR1#MA0304.100.0002333180.1110590.08820857AGGAAGCTGGAAGCC+
SPI1#MA0080.200.0002801090.1333320.08820857AGGAAGCAGGAAGT+
SPI1#MA0080.200.001257030.5983470.2968876AGGAAGCCGGAAG+
ETS1#MA0098.100.002548551.213110.3692256AGGAAGCCGGAAA-
IXR1#MA0323.140.002908551.384470.3692257AGGAAGCAAGCCGGAAGCGGGG+
ELF5#MA0136.110.003056341.454820.3692257AGGAAGCAAGGAAGTA-
Stat3#MA0144.140.003126631.488280.3692256AGGAAGCTTCCAGGAAG+
EWSR1-FLI1#MA0149.1110.004027021.916860.3701767AGGAAGCGGAAGGAAGGAAGGAAGG+
FEV#MA0156.110.004049371.92750.3701767AGGAAGCCAGGAAAT+
CAD1#MA0279.130.004310192.051650.3701767AGGAAGCATTAGTAAGC+
Eip74EF#MA0026.110.004877682.321770.3840056AGGAAGCCCGGAAG+
YAP7#MA0419.130.006420083.055960.4665547AGGAAGCATTAGTAAGCA+
che-1#MA0260.1-20.008389363.993340.5661165AGGAAGCGAAACC+
ttx-3::ceh-10#MA0263.130.01247565.938370.7411397AGGAAGCTTAACGAAGCCAAT-
ELK4#MA0076.120.01255215.974780.7411397AGGAAGCACCGGAAGT+
GABPA#MA0062.220.01334216.350840.7414477AGGAAGCACCGGAAGAG+
GABPA#MA0062.210.01531627.290510.8038657AGGAAGCCCGGAAGTGGC+
SPIB#MA0081.120.01712368.150840.8514255AGGAAGCAGAGGAA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif477&oldid=2134486"