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MacroAPE 1083:CNhs12849 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;166.96070786239676;159.153202838804;677.8460255030459;140.0400637957526!2;701.4712134481113;80.63367956367314;220.4260096739775;141.46909731...")
 
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67!10429-106D6;0.737505!10464-106H5;0.757509!10827-111C8;0.764571!10789-110H6;0.639901!10828-111C9;0.392382!10788-110H5;0.896052!10792-110H9;0.841926!10765-110E9;0.699747!10829-111D1;0.418817!10830-111D2;0.908403!10831-111D3;0.659132!10832-111D4;0.696015!10833-111D5;0.658826!10764-110E8;0.704377!10770-110F5;0.923975!10399-106A3;0.882812!10400-106A4;0.794617!10405-106A9;0.907443!10834-111D6;0.871573!10835-111D7;0.794583!10836-111D8;0.551149!10837-111D9;0.545653!10699-109G6;0.887462!10802-111A1;0.740781!10796-110I4;0.652687!10010-101C1;0.945185!10810-111A9;0.51692!10421-106C7;0.092437!10708-109H6;0.743235!12235-129G3;0.97237!12236-129G4;0.219316!12237-129G5;0.451546!10167-103B5;0.140713!10151-102I7;0.185785!10428-106D5;0.1423!10795-110I3;0.174183!10805-111A4;0.728924!10052-101G7;0.302651!10189-103D9;0.784136!10589-108D4;0.302532!10425-106D2;0.2885!10427-106D4;0.107498!10702-109G9;0.713752!10432-106D9;0.073437!10496-107C1;0.106832!10718-109I7;0.680459!10011-101C2;0.383944!10053-101G8;0.923225!10686-109F2;0.307415!10084-102B3;0.646692!10012-101C3;0.304634!10085-102B4;0.248178!10482-107A5;0.237022!10419-106C5;0.120265!10080-102A8;0.261213!10760-110E4;0.446357!10709-109H7;0.218872!10710-109H8;0.195122!10703-109H1;0.847164!10719-109I8;0.0638973!10642-109A3;0.122317!10177-103C6;0.0988979!10164-103B2;0.105236!10173-103C2;0.139344!10166-103B4;0.0569067!10083-102B2;0.0321596!10188-103D8;0.0938645!10552-107I3;0.227999!10553-107I4;0.439262!10013-101C4;0.00396462!10536-107G5;0.711685!10618-108G6;0.593013!10423-106C9;0.153471!10785-110H2;0.347421!12238-129G6;0.202816!12239-129G7;0.892775!12240-129G8;0.296324!10416-106C2;0.827188!10801-110I9;0.3632!10766-110F1;0.608214!10824-111C5;0.500204!10825-111C6;0.939962!10826-111C7;0.998364!10454-106G4;0.969175!10409-106B4;0.857597!10638-108I8;0.908352!10636-108I6;0.598974!10513-107D9;0.310886!10420-106C6;0.33028!10082-102B1;0.0380362!10014-101C5;0.571821!10070-101I7;0.463902!10452-106G2;0.315576!10453-106G3;0.28807!10449-106F8;0.5918!10042-101F6;0.6368!10069-101I6;0.217259!10193-103E4;0.213232!10631-108I1;0.172948!10438-106E6;0.726806!10488-107B2;0.0553783!10196-103E7;0.637345!10071-101I8;0.103844!10071-101I8;0.28356!10041-101F5;0.124985!10451-106G1;0.941995!10450-106F9;0.273766!10604-108F1;0.0475077!10605-108F2;0.446428!10606-108F3;0.719654!10603-108E9;0.458031!10497-107C2;0.331491!10448-106F7;0.697223!10643-109A4;0.730814!10426-106D3;0.00957484!10431-106D8;0.113615!10197-103E8;0.0934398!10443-106F2;0.517358!10815-111B5;0.933758!10816-111B6;0.687302!10817-111B7;0.456291!10015-101C6;0.567969!10410-106B5;0.879109!10054-101G9;0.667483!10758-110E2;0.708214!10711-109H9;0.526807!10040-101F4;0.578359!10470-106I2;0.189095!10415-106C1;0.333282!10198-103E9;0.653423!10614-108G2;0.583916!10612-108F9;0.105764!10549-107H9;0.2432!10615-108G3;0.0975927!10487-107B1;0.0759099!10433-106E1;0.496314!10688-109F4;0.0424058!10444-106F3;0.149102!10444-106F3;0.159328!10485-107A8;0.20459!10413-106B8;0.313352!10175-103C4;0.675332!10161-103A8;0.0868977!12131-128D7;0.0965765!10624-108H3;0.371459!10712-109I1;0.91812!10205-103F7;0.997848!10206-103F8;0.646053!10207-103F9;0.710652!10050-101G5;0.459176!10051-101G6;0.977475!10016-101C7;0.792179!10046-101G1;0.982323!10778-110G4;0.923331!10633-108I3;0.0983355!10818-111B8;0.2683!10819-111B9;0.831181!10820-111C1;0.795921!10484-107A7;0.774184!10808-111A7;0.107789!10169-103B7;0.623524!10153-102I9;0.18259!13425-144D5;0.161875!13433-144E4;0.534352!13437-144E8;0.69496!11904-125F5;0.817575!11905-125F6;0.210734!10039-101F3;0.0274633!10791-110H8;0.202817!10017-101C8;0.77884!10045-101F9;0.622766!10509-107D5;0.668374!10839-111E2;0.199861!10692-109F8;0.356465!10079-102A7;0.0195778!10078-102A6;0.447705!10721-110A1;0.677121!10569-108B2;0.83083!10570-108B3;0.415084!10571-108B4;0.421947!10647-109A8;0.406702!10752-110D5;0.532246!10782-110G8;0.69036!10726-110A6;0.129919!10018-101C9;0.886827!10086-102B5;0.0877229!10182-103D2;0.0903822!10165-103B3;0.160847!10499-107C4;0.166111!10408-106B3;0.396269!10019-101D1;0.911282!10068-101I5;0.877493!10075-102A3;0.584485!10077-102A5;0.740149!10727-110A7;0.0145106!10775-110G1;0.559409!10412-106B7;0.805791!12231-129F8;0.0586294!12232-129F9;0.23735!12233-129G1;0.268108!12234-129G2;0.528471!10414-106B9;0.505232!10170-103B8;0.0177528!10183-103D3;0.214536!10150-102I6;0.228202!10174-103C3;0.213605!10155-103A2;0.193047!10038-101F2;0.167691!10838-111E1;0.238287!10759-110E3;0.0511362!10514-107E1;0.0296769!10465-106H6;0.818194!10691-109F7;0.218576!10843-111E6;0.799609!10844-111E7;0.240909!11747-123G1;0.0627733!11748-123G2;0.0390104!11749-123G3;0.0298717!11750-123G4;0.0603006!11751-123G5;0.529415!11840-124H4;0.278876!11752-123G6;0.158635!11753-123G7;0.0591358!11754-123G8;0.10367!11755-123G9;0.0269236!11756-123H1;0.154733!11833-124G6;0.0777508!11760-123H5;0.0282558!11836-124G9;0.130287!11758-123H3;0.0900759!11835-124G8;0.0511668!11762-123H7;0.324533!11838-124H2;0.0291257!11757-123H2;0.26519!11759-123H4;0.227859!11761-123H6;0.0320514!11842-124H6;0.159514!11837-124H1;0.429727!10568-108B1;0.130805!13230-141I8;0.0417928!13231-141I9;0.0255302!10696-109G3;0.0364813!10493-107B7;0.271893!10494-107B8;0.95023!10850-111F4;0.915553!10851-111F5;0.409156!10852-111F6;0.557581!10853-111F7;0.614085!10854-111F8;0.326971!10855-111F9;0.649325!10856-111G1;0.269341!10847-111F1;0.412181!10846-111E9;0.743678!10848-111F2;0.879707!10845-111E8;0.598503!10857-111G2;0.569767!10858-111G3;0.267591!10156-103A3;0.928894!11901-125F2;0.189608!11902-125F3;0.912928!11903-125F4;0.869996!10689-109F5;0.950774!10648-109A9;0.0985412!10784-110H1;0.522221!10744-110C6;0.252794!10772-110F7;0.460606!10474-106I6;0.859007!10600-108E6;0.704499!10684-109E9;0.748272!12226-129F3;0.831491!12227-129F4;0.220832!10508-107D4;0.156464!10539-107G8;0.0132906!10607-108F4;0.0451804!10555-107I6;0.999702!10774-110F9;0.0315517!10637-108I7;0.810627!10663-109C6;0.40127!10728-110A8;0.662269!10729-110A9;0.193662!10430-106D7;0.165277!10730-110B1;0.599347!10813-111B3;0.363024!10812-111B2;0.158868!10037-101F1;0.169264!10172-103C1;0.181641!10163-103B1;0.164661!10076-102A4;0.147583!10073-102A1;0.262117!10036-101E9;0.0994711!10195-103E6;0.262589!10277-104E7;0.211443!10434-106E2;0.112011!10550-107I1;0.0836021!10545-107H5;0.0351748!10544-107H4;0.0143141!10704-109H2;0.111766!10510-107D6;0.0200339!10558-107I9;0.0193529!10020-101D2;0.472063!10732-110B3;0.664687!10049-101G4;0.193891!10698-109G5;0.242504!10437-106E5;0.570053!10417-106C3;0.252109!10035-101E8;0.783556!10171-103B9;0.189398!10157-103A4;0.167685!10034-101E7;0.184669!10072-101I9;0.217614!10199-103F1;0.0944205!10200-103F2;0.917222!10697-109G4;0.700264!10723-110A3;0.707929!10179-103C8;0.0293429!10160-103A7;0.274441!10180-103C9;0.225569!10162-103A9;0.0539076!10021-101D3;0.0393644!10840-111E3;0.754926!10706-109H4;0.522466!10033-101E6;0.400674!10032-101E5;0.165358!10490-107B4;0.258758!10439-106E7;0.343873!10022-101D4;0.109781!10176-103C5;0.573217!10469-106I1;0.081703!10067-101I4;0.311789!10411-106B6;0.978614!10471-106I3;0.682078!10030-101E3;0.83993!10475-106I7;0.597159!10787-110H4;0.238659!10477-106I9;0.933375!10695-109G2;0.257037!11771-123I7;0.750885!11772-123I8;0.0239306!11773-123I9;0.0156552!10093-102C3;2.4828e-05!10442-106F1;0.815436!10442-106F1;0.832853!10201-103F3;0.642712!10639-108I9;0.532446!11843-124H7;0.0213483!11841-124H5;0.42015!10693-109F9;0.369459!10436-106E4;0.129354!10483-107A6;0.675454!10282-104F3;0.875052!10023-101D5;0.785216!10066-101I3;0.933761!10065-101I2;0.126423!10800-110I8;0.355663!10610-108F7;0.107683!10841-111E4;0.0959609!10541-107H1;0.18707!10842-111E5;0.000558974!10562-108A4;0.00945128!10024-101D6;0.519939!10064-101I1;0.25848!10609-108F6;0.0791541!10048-101G3;0.148715!10781-110G7;0.748278!10181-103D1;0.102307!10159-103A6;0.180111!10056-101H2;0.0975231!10737-110B8;0.599199!10025-101D7;0.0486303!10044-101F8;0.150211!10424-106D1;0.290855!10463-106H4;0.339993!10616-108G4;0.28211!10486-107A9;0.00183749!10062-101H8;0.331551!10202-103F4;0.303243!10158-103A5;0.796563!10441-106E9;0.153878!10031-101E4;0.159125!10063-101H9;0.296396!10063-101H9;0.102016!11763-123H8;0.285145!11765-123I1;0.0468299!11768-123I4;0.0773774!10807-111A6;0.0455819!10790-110H7;0.287733!10798-110I6;0.0419189!10786-110H3;0.161275!10591-108D6;0.110186!10593-108D8;0.0971712!10590-108D5;0.00533088!10026-101D8;0.208447!10096-102C6;0.298761!10168-103B6;0.884091!10154-103A1;0.179071!10209-103G2;0.103829!10061-101H7;0.487032!10027-101D9;0.557329!10043-101F7;0.60301!10783-110G9;0.521595!10028-101E1;0.609611!10060-101H6;0.248996!10203-103F5;0.94441!10059-101H5;0.874177!10047-101G2;0.446896!10029-101E2;0.435092!10058-101H4;0.569557!10418-106C4;0.379758!10492-107B6;0.0325176!10694-109G1;0.445596!10797-110I5;0.977993!10057-101H3;0.145398!10100-102D1;0.265622!10055-101H1;0.640704!10204-103F6;0.567092!10191-103E2;0.2224!10563-108A5;0.114904
|name=CNhs12849_bu_f1
|name=CNhs12849_bu_f1
|tomtom_result=Esrrb#MA0141.1;1;3.23792e-05;0.0154125;0.030825;11;GACCTTGGGGCT;TGACCTTGAGCT;-!ZAP1#MA0440.1;3;0.00173693;0.826778;0.826778;12;GACCTTGGGGCT;CATGACCTTTAAGGT;-!HNF4A#MA0114.1;1;0.00302007;1.43755;0.95837;12;GACCTTGGGGCT;TGACCTTTGGCCT;-!RUNX1#MA0002.2;-2;0.0105247;5.00974;1;10;GACCTTGGGGCT;GTCTGTGGTTT;+!Cebpa#MA0102.1;0;0.0108377;5.15874;1;12;GACCTTGGGGCT;GAGATTGCGAAA;-!ADR1#MA0268.1;-4;0.011123;5.29455;1;7;GACCTTGGGGCT;GTGGGGT;-!NR2F1#MA0017.1;1;0.0116213;5.53176;1;12;GACCTTGGGGCT;TGACCTTTGAACCT;+!RORA_1#MA0071.1;1;0.0126382;6.01578;1;9;GACCTTGGGGCT;TGACCTTGAT;-!YGR067C#MA0425.1;3;0.0195907;9.32517;1;11;GACCTTGGGGCT;TGAAAAAGTGGGGT;-!NRG1#MA0347.1;7;0.020288;9.6571;1;12;GACCTTGGGGCT;TGCGATGGACCCTGATCTAG;-
}}
}}

Latest revision as of 14:58, 7 September 2012

Full Name: CNhs12849_bu_f1

Motif matrix
POACGT
1166.96070786239676159.153202838804677.8460255030459140.0400637957526
2701.471213448111380.63367956367314220.4260096739775141.46909731423665
3174.49569325597065629.859619357324147.57680713806803192.06788024863715
4228.39802744077028498.75248763979545280.2016504244417136.64783449499137
551.31165784505831142.952908997212353.588746310376045896.1466868473525
69.29200175749923618.33698505311796412.2168434067664671104.1541697826162
710.60092131864876711.7648162478592781105.478169172020716.156093261471003
8433.211859587175415.64663068839697610.17620845723284.96530126719516
9118.2804710677832842.049743172259994907.221978758250476.44780700170534
10440.3483919876657657.90046538223113573.760190711426471.9909519186761
11138.5610089439859443.1631883924912205.37405613222637356.9017465312955
12116.3270247371782666.50012070890634130.56903111126553830.6038234426484

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Esrrb#MA0141.113.23792e-050.01541250.03082511GACCTTGGGGCTTGACCTTGAGCT-
ZAP1#MA0440.130.001736930.8267780.82677812GACCTTGGGGCTCATGACCTTTAAGGT-
HNF4A#MA0114.110.003020071.437550.9583712GACCTTGGGGCTTGACCTTTGGCCT-
RUNX1#MA0002.2-20.01052475.00974110GACCTTGGGGCTGTCTGTGGTTT+
Cebpa#MA0102.100.01083775.15874112GACCTTGGGGCTGAGATTGCGAAA-
ADR1#MA0268.1-40.0111235.2945517GACCTTGGGGCTGTGGGGT-
NR2F1#MA0017.110.01162135.53176112GACCTTGGGGCTTGACCTTTGAACCT+
RORA_1#MA0071.110.01263826.0157819GACCTTGGGGCTTGACCTTGAT-
YGR067C#MA0425.130.01959079.32517111GACCTTGGGGCTTGAAAAAGTGGGGT-
NRG1#MA0347.170.0202889.6571112GACCTTGGGGCTTGCGATGGACCCTGATCTAG-
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