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MacroAPE 1083:TTGATGATGATG,motif935: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;23.718;9.849;12.06;155.373!2;3.216;0.201;16.482;181.101!3;16.683;31.557;148.338;4.422!4;161.805;9.648;0.201;29.346!5;5.025;0.201;27.939;167....")
 
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560841!10789-110H6;0.364724!10828-111C9;0.315189!10788-110H5;0.46725!10792-110H9;0.260962!10765-110E9;0.662537!10829-111D1;0.0853211!10830-111D2;0.493407!10831-111D3;0.10067!10832-111D4;0.218136!10833-111D5;0.143311!10764-110E8;0.00748724!10770-110F5;0.0285205!10399-106A3;0.123222!10400-106A4;0.172699!10405-106A9;0.127681!10834-111D6;0.188447!10835-111D7;0.406922!10836-111D8;0.190154!10837-111D9;0.970606!10699-109G6;0.0459335!10802-111A1;0.362809!10796-110I4;0.241228!10010-101C1;0.00205154!10810-111A9;0.691727!10421-106C7;0.708787!10708-109H6;0.337624!12235-129G3;0.742889!12236-129G4;0.130439!12237-129G5;0.67238!10167-103B5;0.300336!10151-102I7;0.00613584!10428-106D5;0.00121325!10795-110I3;0.831862!10805-111A4;0.924032!10052-101G7;0.570383!10189-103D9;0.580527!10589-108D4;0.30601!10425-106D2;0.565896!10427-106D4;0.950186!10702-109G9;0.260825!10432-106D9;0.434072!10496-107C1;0.102044!10718-109I7;0.599903!10011-101C2;0.0106552!10053-101G8;0.630595!10686-109F2;0.438136!10084-102B3;0.986577!10012-101C3;0.00738914!10085-102B4;0.00165091!10482-107A5;0.00578742!10419-106C5;0.491164!10080-102A8;0.0235718!10760-110E4;0.386791!10709-109H7;0.259301!10710-109H8;0.038525!10703-109H1;0.0114913!10719-109I8;0.100462!10642-109A3;0.239402!10177-103C6;0.0162671!10164-103B2;0.0557492!10173-103C2;0.0161912!10166-103B4;7.18306e-05!10083-102B2;9.48775e-05!10188-103D8;0.00159848!10552-107I3;0.00173287!10553-107I4;0.214276!10013-101C4;0.00328856!10536-107G5;0.624007!10618-108G6;0.887358!10423-106C9;0.0795816!10785-110H2;0.102694!12238-129G6;0.00586453!12239-129G7;0.134395!12240-129G8;0.879753!10416-106C2;0.529576!10801-110I9;0.77299!10766-110F1;0.173658!10824-111C5;0.151545!10825-111C6;0.430141!10826-111C7;0.325589!10454-106G4;0.41153!10409-106B4;0.837689!10638-108I8;0.185709!10636-108I6;0.426509!10513-107D9;0.110724!10420-106C6;0.101316!10082-102B1;0.892596!10014-101C5;0.121842!10070-101I7;0.237198!10452-106G2;0.944515!10453-106G3;0.969492!10449-106F8;0.815045!10042-101F6;0.918378!10069-101I6;0.0493491!10193-103E4;0.766002!10631-108I1;0.00877167!10438-106E6;0.124375!10488-107B2;0.0139502!10196-103E7;0.703023!10071-101I8;0.156629!10071-101I8;0.679918!10041-101F5;0.000339411!10451-106G1;0.691452!10450-106F9;0.920001!10604-108F1;0.987217!10605-108F2;0.861835!10606-108F3;0.459757!10603-108E9;0.534918!10497-107C2;0.486381!10448-106F7;0.366665!10643-109A4;0.667386!10426-106D3;0.320681!10431-106D8;8.58328e-05!10197-103E8;0.0372393!10443-106F2;0.646986!10815-111B5;0.546868!10816-111B6;0.115692!10817-111B7;0.039428!10015-101C6;0.119209!10410-106B5;0.0834018!10054-101G9;0.0984867!10758-110E2;0.267641!10711-109H9;0.738212!10040-101F4;0.823459!10470-106I2;0.00126724!10415-106C1;0.0931645!10198-103E9;0.63328!10614-108G2;0.38309!10612-108F9;0.522247!10549-107H9;0.0198407!10615-108G3;0.780787!10487-107B1;0.559841!10433-106E1;0.0317384!10688-109F4;0.138787!10444-106F3;0.246673!10444-106F3;0.512908!10485-107A8;0.44376!10413-106B8;0.152177!10175-103C4;0.843382!10161-103A8;0.0340624!12131-128D7;0.0259934!10624-108H3;0.193188!10712-109I1;0.27909!10205-103F7;0.322588!10206-103F8;0.838602!10207-103F9;0.997569!10050-101G5;0.18807!10051-101G6;0.133087!10016-101C7;0.382056!10046-101G1;0.369813!10778-110G4;0.461624!10633-108I3;0.948215!10818-111B8;0.175848!10819-111B9;0.835659!10820-111C1;0.789833!10484-107A7;0.768187!10808-111A7;0.431178!10169-103B7;0.410896!10153-102I9;0.00486474!13425-144D5;0.00364714!13433-144E4;0.673163!13437-144E8;0.758007!11904-125F5;0.822277!11905-125F6;0.30571!10039-101F3;0.00330828!10791-110H8;0.00106798!10017-101C8;0.142055!10045-101F9;0.100059!10509-107D5;0.124028!10839-111E2;0.32261!10692-109F8;0.569777!10079-102A7;0.0214319!10078-102A6;0.978215!10721-110A1;0.390162!10569-108B2;0.501812!10570-108B3;0.0303477!10571-108B4;0.108507!10647-109A8;0.0637409!10752-110D5;0.853708!10782-110G8;0.248854!10726-110A6;0.14391!10018-101C9;0.286521!10086-102B5;0.0415803!10182-103D2;5.37099e-06!10165-103B3;0.00556296!10499-107C4;0.00408785!10408-106B3;0.9407!10019-101D1;0.0354777!10068-101I5;0.10523!10075-102A3;0.295535!10077-102A5;0.0995359!10727-110A7;0.677297!10775-110G1;0.00728158!10412-106B7;0.630646!12231-129F8;0.0757692!12232-129F9;0.603822!12233-129G1;0.822845!12234-129G2;0.758117!10414-106B9;0.499343!10170-103B8;0.487086!10183-103D3;0.000421378!10150-102I6;0.000367605!10174-103C3;0.00135261!10155-103A2;0.234996!10038-101F2;0.0266432!10838-111E1;0.0445505!10759-110E3;0.702314!10514-107E1;0.7022!10465-106H6;0.881358!10691-109F7;0.947317!10843-111E6;0.649686!10844-111E7;0.481639!11747-123G1;0.321574!11748-123G2;0.66417!11749-123G3;0.504537!11750-123G4;0.850998!11751-123G5;0.604981!11840-124H4;0.791738!11752-123G6;0.912798!11753-123G7;0.569443!11754-123G8;0.86485!11755-123G9;0.449841!11756-123H1;0.271405!11833-124G6;0.536506!11760-123H5;0.0273962!11836-124G9;0.826043!11758-123H3;0.565528!11835-124G8;0.517828!11762-123H7;0.134666!11838-124H2;0.75321!11757-123H2;0.376783!11759-123H4;0.536317!11761-123H6;0.991172!11842-124H6;0.732302!11837-124H1;0.566969!10568-108B1;0.161029!13230-141I8;0.246899!13231-141I9;0.45459!10696-109G3;0.477617!10493-107B7;0.595294!10494-107B8;0.0789071!10850-111F4;0.0126508!10851-111F5;0.855293!10852-111F6;0.670155!10853-111F7;0.121382!10854-111F8;0.726176!10855-111F9;0.916683!10856-111G1;0.915874!10847-111F1;0.267847!10846-111E9;0.799714!10848-111F2;0.562192!10845-111E8;0.900757!10857-111G2;0.729629!10858-111G3;0.434276!10156-103A3;0.469276!11901-125F2;0.00202484!11902-125F3;0.194354!11903-125F4;0.32697!10689-109F5;0.27372!10648-109A9;0.630193!10784-110H1;0.417492!10744-110C6;0.218162!10772-110F7;0.955184!10474-106I6;0.53041!10600-108E6;0.537919!10684-109E9;0.653465!12226-129F3;0.837058!12227-129F4;0.685831!10508-107D4;0.000226649!10539-107G8;0.00135626!10607-108F4;0.0229877!10555-107I6;0.800172!10774-110F9;0.0285494!10637-108I7;0.63743!10663-109C6;0.68904!10728-110A8;0.910375!10729-110A9;0.0273252!10430-106D7;0.883128!10730-110B1;0.048123!10813-111B3;0.0392112!10812-111B2;0.435313!10037-101F1;0.668651!10172-103C1;0.00323832!10163-103B1;0.00156389!10076-102A4;0.00234737!10073-102A1;0.000352262!10036-101E9;0.0012024!10195-103E6;0.00381299!10277-104E7;0.000909399!10434-106E2;0.0341216!10550-107I1;0.0284199!10545-107H5;0.293513!10544-107H4;0.411118!10704-109H2;0.102534!10510-107D6;0.159252!10558-107I9;0.461934!10020-101D2;0.533785!10732-110B3;0.636208!10049-101G4;0.252365!10698-109G5;0.0158206!10437-106E5;0.012201!10417-106C3;0.575611!10035-101E8;0.228809!10171-103B9;0.00236007!10157-103A4;0.00145934!10034-101E7;0.00107511!10072-101I9;0.0027388!10199-103F1;0.0035875!10200-103F2;0.00278977!10697-109G4;0.971391!10723-110A3;0.543043!10179-103C8;0.00217915!10160-103A7;0.0489198!10180-103C9;0.0616236!10162-103A9;0.0421285!10021-101D3;0.0765338!10840-111E3;0.0526103!10706-109H4;0.732092!10033-101E6;0.216222!10032-101E5;0.00178612!10490-107B4;0.00277027!10439-106E7;0.0151597!10022-101D4;0.160398!10176-103C5;0.49181!10469-106I1;0.00753044!10067-101I4;0.00617141!10411-106B6;0.60944!10471-106I3;0.0932762!10030-101E3;0.685782!10475-106I7;0.639517!10787-110H4;0.716713!10477-106I9;0.49045!10695-109G2;0.444167!11771-123I7;0.433236!11772-123I8;0.663364!11773-123I9;0.763782!10093-102C3;0.110614!10442-106F1;0.00454687!10442-106F1;0.293583!10201-103F3;0.293789!10639-108I9;0.549829!11843-124H7;0.581336!11841-124H5;0.430683!10693-109F9;0.545954!10436-106E4;0.00136575!10483-107A6;0.0100827!10282-104F3;0.123019!10023-101D5;0.768947!10066-101I3;0.274375!10065-101I2;0.699899!10800-110I8;0.557596!10610-108F7;0.757856!10841-111E4;0.977406!10541-107H1;0.729162!10842-111E5;0.49492!10562-108A4;0.108304!10024-101D6;0.544642!10064-101I1;0.150405!10609-108F6;0.186952!10048-101G3;0.786748!10781-110G7;0.953395!10181-103D1;0.822765!10159-103A6;0.0631084!10056-101H2;0.0421886!10737-110B8;0.00765241!10025-101D7;0.570651!10044-101F8;0.119619!10424-106D1;0.0750342!10463-106H4;0.149322!10616-108G4;0.0890323!10486-107A9;0.257889!10062-101H8;0.0511087!10202-103F4;0.0889977!10158-103A5;0.236997!10441-106E9;0.0669616!10031-101E4;0.991924!10063-101H9;0.00352504!10063-101H9;0.000899334!11763-123H8;0.715989!11765-123I1;0.608672!11768-123I4;0.770611!10807-111A6;0.46151!10790-110H7;0.928131!10798-110I6;0.972649!10786-110H3;0.383391!10591-108D6;0.727013!10593-108D8;0.936205!10590-108D5;0.975712!10026-101D8;0.98087!10096-102C6;0.733676!10168-103B6;0.467067!10154-103A1;0.0118558!10209-103G2;0.0285579!10061-101H7;0.2708!10027-101D9;0.781392!10043-101F7;0.28171!10783-110G9;0.0852973!10028-101E1;0.455755!10060-101H6;0.17291!10203-103F5;0.805486!10059-101H5;0.8782!10047-101G2;0.667262!10029-101E2;0.0157803!10058-101H4;0.0667163!10418-106C4;0.922338!10492-107B6;0.143823!10694-109G1;0.0917644!10797-110I5;0.0934171!10057-101H3;0.354514!10100-102D1;0.686004!10055-101H1;0.994361!10204-103F6;0.294407!10191-103E2;0.170049!10563-108A5;0.971011
|name=TTGATGATGATG,motif935,CNhs12625,T:201.0(4.52%),B:1461.2(1.89%),P:1e-27
|name=TTGATGATGATG,motif935,CNhs12625,T:201.0(4.52%),B:1461.2(1.89%),P:1e-27
|tomtom_result=Dfd#MA0186.1;0;0.00690343;3.28603;1;7;TTGATGATGATG;TTAATGA;+!btn#MA0215.1;0;0.00942672;4.48712;1;7;TTGATGATGATG;TTAATGA;+!Scr#MA0203.1;0;0.00991359;4.71887;1;7;TTGATGATGATG;TTAATGA;+!ZAP1#MA0440.1;3;0.0137027;6.52249;1;12;TTGATGATGATG;ACCTTAAAGGTCATG;+!Antp#MA0166.1;0;0.0139214;6.62661;1;7;TTGATGATGATG;TTAATGA;+!CG42234#MA0174.1;0;0.014582;6.94102;1;7;TTGATGATGATG;TTTATTA;+!Abd-B#MA0165.1;0;0.0152672;7.26718;1;7;TTGATGATGATG;TTTATGA;+!HCM1#MA0317.1;0;0.0153082;7.2867;1;8;TTGATGATGATG;TTGTTTAT;-!ftz#MA0225.1;0;0.0174796;8.32027;1;7;TTGATGATGATG;TTAATGA;+!ABF1#MA0265.1;3;0.0192617;9.16855;1;12;TTGATGATGATG;TCGTATAAAGTGATAA;+
}}
}}

Latest revision as of 15:02, 7 September 2012

Full Name: TTGATGATGATG,motif935,CNhs12625,T:201.0(4.52%),B:1461.2(1.89%),P:1e-27

Motif matrix
POACGT
123.7189.84912.06155.373
23.2160.20116.482181.101
316.68331.557148.3384.422
4161.8059.6480.20129.346
55.0250.20127.939167.835
65.8293.216191.7540.201
7144.1171.20635.97919.698
816.080.20116.683168.036
916.88413.467167.2323.417
10122.40923.91914.27140.401
110.2013.2162.412195.171
121.8093.417183.91511.859

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Dfd#MA0186.100.006903433.2860317TTGATGATGATGTTAATGA+
btn#MA0215.100.009426724.4871217TTGATGATGATGTTAATGA+
Scr#MA0203.100.009913594.7188717TTGATGATGATGTTAATGA+
ZAP1#MA0440.130.01370276.52249112TTGATGATGATGACCTTAAAGGTCATG+
Antp#MA0166.100.01392146.6266117TTGATGATGATGTTAATGA+
CG42234#MA0174.100.0145826.9410217TTGATGATGATGTTTATTA+
Abd-B#MA0165.100.01526727.2671817TTGATGATGATGTTTATGA+
HCM1#MA0317.100.01530827.286718TTGATGATGATGTTGTTTAT-
ftz#MA0225.100.01747968.3202717TTGATGATGATGTTAATGA+
ABF1#MA0265.130.01926179.16855112TTGATGATGATGTCGTATAAAGTGATAA+
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