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MacroAPE 1083:CNhs11848 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;299.92764577160915;465.5080757788876;258.6324027108924;163.42707339872985!2;235.78372739225313;515.4370791772224;139.37891806326138;296.8954...")
 
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.46293!10827-111C8;0.305461!10789-110H6;0.991983!10828-111C9;0.445387!10788-110H5;0.349822!10792-110H9;0.453232!10765-110E9;0.481393!10829-111D1;0.757681!10830-111D2;0.946206!10831-111D3;0.222893!10832-111D4;0.598204!10833-111D5;0.858688!10764-110E8;0.808212!10770-110F5;0.412106!10399-106A3;0.430127!10400-106A4;0.759418!10405-106A9;0.734736!10834-111D6;0.681573!10835-111D7;0.604152!10836-111D8;0.650953!10837-111D9;0.85977!10699-109G6;0.650673!10802-111A1;0.438551!10796-110I4;0.401966!10010-101C1;0.662336!10810-111A9;0.450904!10421-106C7;0.253429!10708-109H6;0.948673!12235-129G3;0.106343!12236-129G4;0.434623!12237-129G5;0.35464!10167-103B5;0.816441!10151-102I7;0.896689!10428-106D5;0.709512!10795-110I3;0.551838!10805-111A4;0.487808!10052-101G7;0.286614!10189-103D9;0.742063!10589-108D4;0.621235!10425-106D2;0.390263!10427-106D4;0.536353!10702-109G9;0.423637!10432-106D9;0.345648!10496-107C1;0.476139!10718-109I7;0.827948!10011-101C2;0.767877!10053-101G8;0.962448!10686-109F2;0.239326!10084-102B3;0.826371!10012-101C3;0.676946!10085-102B4;0.840366!10482-107A5;0.426989!10419-106C5;0.415926!10080-102A8;0.529201!10760-110E4;0.371827!10709-109H7;0.534005!10710-109H8;0.936072!10703-109H1;0.210077!10719-109I8;0.798563!10642-109A3;0.984682!10177-103C6;0.576541!10164-103B2;0.69324!10173-103C2;0.780578!10166-103B4;0.635306!10083-102B2;0.795234!10188-103D8;0.805554!10552-107I3;0.893043!10553-107I4;0.515168!10013-101C4;0.626164!10536-107G5;0.908978!10618-108G6;0.707195!10423-106C9;0.358012!10785-110H2;0.116728!12238-129G6;0.228526!12239-129G7;0.594584!12240-129G8;0.00265364!10416-106C2;0.623096!10801-110I9;0.534151!10766-110F1;0.743124!10824-111C5;0.596543!10825-111C6;0.223599!10826-111C7;0.300487!10454-106G4;0.455941!10409-106B4;0.247377!10638-108I8;0.569742!10636-108I6;0.187806!10513-107D9;0.505786!10420-106C6;0.175173!10082-102B1;0.796658!10014-101C5;0.465427!10070-101I7;0.528669!10452-106G2;0.552245!10453-106G3;0.533347!10449-106F8;0.442486!10042-101F6;0.409902!10069-101I6;0.73809!10193-103E4;0.527675!10631-108I1;0.784632!10438-106E6;0.861383!10488-107B2;0.958867!10196-103E7;0.218655!10071-101I8;0.637262!10071-101I8;0.816576!10041-101F5;0.526435!10451-106G1;0.223431!10450-106F9;0.689886!10604-108F1;0.899021!10605-108F2;0.660169!10606-108F3;0.999274!10603-108E9;0.565317!10497-107C2;0.61609!10448-106F7;0.917922!10643-109A4;0.227907!10426-106D3;0.500187!10431-106D8;0.673043!10197-103E8;0.805725!10443-106F2;0.585695!10815-111B5;0.00439216!10816-111B6;0.146883!10817-111B7;0.242897!10015-101C6;0.163259!10410-106B5;0.259905!10054-101G9;0.237994!10758-110E2;0.547156!10711-109H9;0.512019!10040-101F4;0.290447!10470-106I2;0.645625!10415-106C1;0.400416!10198-103E9;0.689043!10614-108G2;0.620362!10612-108F9;0.32723!10549-107H9;0.142156!10615-108G3;0.6511!10487-107B1;0.892761!10433-106E1;0.54575!10688-109F4;0.784097!10444-106F3;0.85387!10444-106F3;0.105941!10485-107A8;0.135963!10413-106B8;0.38072!10175-103C4;0.460468!10161-103A8;0.808712!12131-128D7;0.920098!10624-108H3;0.0370359!10712-109I1;0.327499!10205-103F7;0.587691!10206-103F8;0.914369!10207-103F9;0.492291!10050-101G5;0.673953!10051-101G6;0.0964908!10016-101C7;0.183231!10046-101G1;0.772365!10778-110G4;0.827553!10633-108I3;0.17443!10818-111B8;0.130196!10819-111B9;0.155376!10820-111C1;0.133353!10484-107A7;0.145755!10808-111A7;0.530252!10169-103B7;0.83296!10153-102I9;0.837319!13425-144D5;0.789994!13433-144E4;0.361692!13437-144E8;0.331451!11904-125F5;0.203638!11905-125F6;0.263141!10039-101F3;0.092588!10791-110H8;0.603715!10017-101C8;0.0892504!10045-101F9;0.9291!10509-107D5;0.515828!10839-111E2;0.606846!10692-109F8;0.768853!10079-102A7;0.994011!10078-102A6;0.595355!10721-110A1;0.201496!10569-108B2;0.12051!10570-108B3;0.020325!10571-108B4;0.00315698!10647-109A8;0.00367977!10752-110D5;0.902826!10782-110G8;0.586212!10726-110A6;0.0503668!10018-101C9;0.49363!10086-102B5;0.588751!10182-103D2;0.142972!10165-103B3;0.875821!10499-107C4;0.883801!10408-106B3;0.710653!10019-101D1;0.771877!10068-101I5;0.428603!10075-102A3;0.217887!10077-102A5;0.383438!10727-110A7;0.298921!10775-110G1;0.723036!10412-106B7;0.619049!12231-129F8;0.923394!12232-129F9;0.390202!12233-129G1;0.2075!12234-129G2;0.262332!10414-106B9;0.38653!10170-103B8;0.749527!10183-103D3;0.897286!10150-102I6;0.816874!10174-103C3;0.767966!10155-103A2;0.966749!10038-101F2;0.935511!10838-111E1;0.700979!10759-110E3;0.460789!10514-107E1;0.712642!10465-106H6;0.109356!10691-109F7;0.154619!10843-111E6;0.729262!10844-111E7;0.638872!11747-123G1;0.990563!11748-123G2;0.0547101!11749-123G3;0.160359!11750-123G4;0.228971!11751-123G5;0.892285!11840-124H4;0.717983!11752-123G6;0.891793!11753-123G7;0.379262!11754-123G8;0.421207!11755-123G9;0.307379!11756-123H1;0.0181236!11833-124G6;0.0280318!11760-123H5;0.710084!11836-124G9;0.13309!11758-123H3;0.224064!11835-124G8;0.39878!11762-123H7;0.180196!11838-124H2;0.315742!11757-123H2;0.443071!11759-123H4;0.0221414!11761-123H6;0.444892!11842-124H6;0.614062!11837-124H1;0.51777!10568-108B1;0.145528!13230-141I8;0.125195!13231-141I9;0.258192!10696-109G3;0.323983!10493-107B7;0.501553!10494-107B8;0.227144!10850-111F4;0.156969!10851-111F5;0.638526!10852-111F6;0.252828!10853-111F7;0.025969!10854-111F8;0.249439!10855-111F9;0.202019!10856-111G1;0.447269!10847-111F1;0.161158!10846-111E9;0.180939!10848-111F2;0.268251!10845-111E8;0.145519!10857-111G2;0.265402!10858-111G3;0.121972!10156-103A3;0.22941!11901-125F2;0.789616!11902-125F3;0.747011!11903-125F4;0.372365!10689-109F5;0.385943!10648-109A9;0.0957504!10784-110H1;0.321091!10744-110C6;0.65303!10772-110F7;0.513304!10474-106I6;0.969158!10600-108E6;0.490598!10684-109E9;0.0272263!12226-129F3;0.88483!12227-129F4;0.714665!10508-107D4;0.334218!10539-107G8;0.963477!10607-108F4;0.486193!10555-107I6;0.228041!10774-110F9;0.483743!10637-108I7;0.154502!10663-109C6;0.513895!10728-110A8;0.349068!10729-110A9;0.521906!10430-106D7;0.917236!10730-110B1;0.280896!10813-111B3;0.359117!10812-111B2;0.474997!10037-101F1;0.0227853!10172-103C1;0.593821!10163-103B1;0.761045!10076-102A4;0.77191!10073-102A1;0.61629!10036-101E9;0.259572!10195-103E6;0.717268!10277-104E7;0.8035!10434-106E2;0.634703!10550-107I1;0.840522!10545-107H5;0.406558!10544-107H4;0.094543!10704-109H2;0.700099!10510-107D6;0.366507!10558-107I9;0.600082!10020-101D2;0.73946!10732-110B3;0.929794!10049-101G4;0.136206!10698-109G5;0.2934!10437-106E5;0.170322!10417-106C3;0.0966523!10035-101E8;0.903633!10171-103B9;0.675912!10157-103A4;0.815751!10034-101E7;0.793132!10072-101I9;0.621221!10199-103F1;0.393979!10200-103F2;0.998387!10697-109G4;0.340246!10723-110A3;0.543571!10179-103C8;0.537961!10160-103A7;0.792921!10180-103C9;0.948429!10162-103A9;0.521023!10021-101D3;0.197281!10840-111E3;0.935639!10706-109H4;0.398299!10033-101E6;0.377786!10032-101E5;0.792491!10490-107B4;0.736666!10439-106E7;0.569049!10022-101D4;0.352709!10176-103C5;0.67833!10469-106I1;0.787669!10067-101I4;0.634232!10411-106B6;0.719052!10471-106I3;0.787026!10030-101E3;0.188703!10475-106I7;0.513935!10787-110H4;0.984862!10477-106I9;0.626093!10695-109G2;0.595979!11771-123I7;0.994224!11772-123I8;0.826692!11773-123I9;0.499755!10093-102C3;0.146035!10442-106F1;0.60918!10442-106F1;0.304734!10201-103F3;0.448297!10639-108I9;0.97117!11843-124H7;0.762818!11841-124H5;0.287918!10693-109F9;0.202888!10436-106E4;0.195!10483-107A6;0.519937!10282-104F3;0.712307!10023-101D5;0.00431797!10066-101I3;0.0928265!10065-101I2;0.197191!10800-110I8;0.788087!10610-108F7;0.639336!10841-111E4;0.976018!10541-107H1;0.579993!10842-111E5;0.960253!10562-108A4;0.975953!10024-101D6;0.159707!10064-101I1;0.643474!10609-108F6;0.396609!10048-101G3;0.214963!10781-110G7;0.920115!10181-103D1;0.730614!10159-103A6;0.969083!10056-101H2;0.843155!10737-110B8;0.727006!10025-101D7;0.808338!10044-101F8;0.268771!10424-106D1;0.208503!10463-106H4;0.654693!10616-108G4;0.647656!10486-107A9;0.982115!10062-101H8;0.81361!10202-103F4;0.670941!10158-103A5;0.894949!10441-106E9;0.986773!10031-101E4;0.41566!10063-101H9;0.67654!10063-101H9;0.471432!11763-123H8;0.372344!11765-123I1;0.0947358!11768-123I4;0.847263!10807-111A6;0.0781005!10790-110H7;0.0975241!10798-110I6;0.232427!10786-110H3;0.199574!10591-108D6;0.405094!10593-108D8;0.468729!10590-108D5;0.950163!10026-101D8;0.0756816!10096-102C6;0.300185!10168-103B6;0.0491076!10154-103A1;0.934184!10209-103G2;0.796604!10061-101H7;0.461207!10027-101D9;0.809324!10043-101F7;0.161465!10783-110G9;0.124121!10028-101E1;0.228411!10060-101H6;0.70882!10203-103F5;0.55522!10059-101H5;0.0969254!10047-101G2;0.278892!10029-101E2;0.43369!10058-101H4;0.668581!10418-106C4;0.776698!10492-107B6;0.878765!10694-109G1;0.45761!10797-110I5;0.517728!10057-101H3;0.843481!10100-102D1;0.318438!10055-101H1;0.425525!10204-103F6;0.66451!10191-103E2;0.446489!10563-108A5;0.688396
|name=CNhs11848_bu_f2
|name=CNhs11848_bu_f2
|tomtom_result=Hltf#MA0109.1;1;0.00274571;1.30696;1;8;CCCTTCTG;AACCTTATAT;+!Kr#MA0452.1;3;0.00311916;1.48472;1;8;CCCTTCTG;TAACCCTTTTG;-
}}
}}

Latest revision as of 15:02, 7 September 2012

Full Name: CNhs11848_bu_f2

Motif matrix
POACGT
1299.92764577160915465.5080757788876258.6324027108924163.42707339872985
2235.78372739225313515.4370791772224139.37891806326138296.89547302738185
310.8522459896553621154.938459691152510.85224598965536210.852245989655362
40.00.00.01187.495197660119
50.00.022.0518225739729881165.443375086146
630.067782256099463521.6037436967018199.0970008457928436.7266708615249
76.9815417341643193.477676046295578712.6510047106375081164.384975169022
8120.93278452706748207.95959975949364468.18128627535197390.4215270982055

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Hltf#MA0109.110.002745711.3069618CCCTTCTGAACCTTATAT+
Kr#MA0452.130.003119161.4847218CCCTTCTGTAACCCTTTTG-
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