FFCP PHASE1:Mm9::chr10:79516368..79516410,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=625249 | |EntrezGene=625249 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=O70325,Q8K4U7 | |UniProt=O70325,Q8K4U7 | ||
|association_with_transcript=113bp_to_NM_008162,uc007gbk.1_5end | |association_with_transcript=113bp_to_NM_008162,uc007gbk.1_5end | ||
|cluster_id=chr10:79516368..79516410,+ | |||
|description=CAGE_peak_1_at_Gpx4_5end | |description=CAGE_peak_1_at_Gpx4_5end | ||
|id=chr10:79516368..79516410,+ | |id=chr10:79516368..79516410,+ | ||
|ontology_enrichment_celltype=CL:0002371!8.53e-17!118;CL:0000144!9.24e-17!121;CL:0000012!9.24e-17!121;CL:0000548!2.29e-15!115;CL:0000004!2.29e-15!115;CL:0000255!2.29e-15!115;CL:0002321!3.54e-11!70;CL:0000220!3.54e-11!70;CL:0000034!7.30e-10!97;CL:0000055!4.76e-09!50;CL:0000723!7.71e-09!91;CL:0000048!7.71e-09!91;CL:0000219!8.97e-07!54 | |ontology_enrichment_celltype=CL:0002371!8.53e-17!118;CL:0000144!9.24e-17!121;CL:0000012!9.24e-17!121;CL:0000548!2.29e-15!115;CL:0000004!2.29e-15!115;CL:0000255!2.29e-15!115;CL:0002321!3.54e-11!70;CL:0000220!3.54e-11!70;CL:0000034!7.30e-10!97;CL:0000055!4.76e-09!50;CL:0000723!7.71e-09!91;CL:0000048!7.71e-09!91;CL:0000219!8.97e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.54e-11,70;CL:0000034,7.30e-10,97;CL:0000723,7.71e-09,91;CL:0000048,7.71e-09,91;CL:0000219,8.97e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=196.022188856268,493.800201809696,518.244133664681,639.106878491332,521.432454874147,160.156825403943,180.11534589915,168.505937091257,22.2446180999633,28.0877431586392,12.1564757440109,9.01425396647301,106.315653287279,106.740311353596,341.437505861054,356.963896408263,656.88860356233,106.310749725726,103.521397372333,142.17053335234,240.07720809647,150.822954874145,257.54299209099,339.503921167609,358.566706307987,641.991335880593,502.268487521481,375.350887338819,460.426745342794,380.565495937495,228.160695464309,393.083986871512,320.448754331561,396.204202538597,168.689345934744,189.008791772606,157.210404322024,431.087579659015,485.20924894928,480.594796967947,508.232005658796,586.053026094346,456.865242202316,422.132030672111,408.954540539522,394.258423643292,1046.05722739333,850.952185352883,704.094215663982,1085.50212653172,541.887438111778,809.32693737479,114.092172119261,153.776774106405,107.213921926446,539.987556239453,582.522483395492,546.096745721811,189.570523825443,241.748877527319,289.027119998818,591.961397524774,625.174241666131,841.856185516749,980.955431666439,1101.9546582814,797.835094310512,1371.65934999795,131.167359570224,189.818349294357,159.426320704348,379.630158272655,415.453725529985,135.964787128599,147.889561781139,192.116726401494,461.385541387439,349.735619015329,402.449117131358,166.176722540044,193.679341506301,177.631459359855,623.694819769085,538.001055190286,388.413145848651,214.194981639356,232.635326425734,163.099515097138,210.064460306253,263.895887892895,232.181455450044,482.697794986558,412.742599560605,477.09762140783,346.980606917055,331.987923339126,342.403496281211,660.417499989974,904.315082022586,1000.65767501328,247.180201708074,397.812079984385,86.6337815002595,35.5533351576666,418.260691233666,410.94970180061,512.60178724499,278.722850394225,35.9923658269569,171.895997037067,166.54591369549,254.53313986895,225.541956316425,289.839637782693,151.689432205059,281.870164352462,217.03718167078,468.646515777434,138.88385665613,115.50153086245,139.350998148508,159.523958281488,123.018562403961,164.54280792049,177.401360670996,255.457055208591,261.196971422906,441.528410011148,275.234111840258,200.419875523653,209.99277669375,99.0156294649371,202.157684383618,189.485153881775,263.059664412403,218.214498826134,87.2763348197211,140.455469818795,223.912363972236,336.496527562472,125.956588787897,200.014830857121,143.869641714474,144.827329940122,87.2227919120023,110.049685724686,132.494238527457,229.728593216246,110.370812381615,65.9980219785689,68.9728406722679,101.926015578822,76.4629935370394,73.8294593026993,76.9625190165709,104.891058613346,396.048237644664,332.493495992212,207.723518058178,155.344329401626,168.858763186389,207.071370680167,140.38962820203,185.942199001297,190.05708307725,206.722676883113,236.885413435864,175.264778893121,176.572718957165,255.444574107072,257.960951974913,415.207964287944,363.135890691398,391.614329942765,183.583125096483,77.5900777339805,432.187768142808,284.813260296637,105.364395764406,111.47360249301,99.0990777566898,124.842101741849,189.910849443519,227.890300082846,294.682547219142,365.302281577856,235.501090645853,275.952626721076,203.9324351266,225.60367157221,284.653811684972,271.429555445702,162.924726918697,110.249814668388,78.8954149711563,140.723067541112,160.592659374794,110.393780507361,155.245698640052,349.097999971759,376.168951907934,405.853272138802,288.151953528709,160.838681910315,175.920300626317,218.116249013308,212.394547093763,225.018290049005,309.879661617988,205.70273827733,155.001276796934,230.082464251612,71.8841032636773,164.11415792181,179.109624367758,159.12469310668,243.262892735713,265.826380271215,196.023134766768,149.887706710453,77.0824338570782,105.072208094841,111.008487440461,131.492412091825,163.059894006919,130.154143121152,93.7929107431836,129.335378754885,90.4108538287952,210.564359409723,213.956692531845,213.212712349148,508.166626875348,374.751016151091,232.604501138004,243.652146987079,293.807579677659,247.082235336364,217.869542405602,336.291275036225,258.085723482498,304.932659295675,219.085595494256,206.94697902691,191.161262362694,159.089010303324,257.459606265233,263.322527978092,190.528708970224,142.345343174861,110.287446206825,152.42415673917,85.678540619981,87.1042249294987,144.692200790559,169.460884036177,164.464014988825,172.007832737379,190.469720908098,172.778553144487,126.888291945597,113.058989867504,149.015904164814,105.556277150563,174.994890234498,172.236357224472,126.303093734655,115.059039086007,142.811986896161,125.387165493481,90.9755398584863,110.588666913284,103.99498102054,174.458415842665,202.052340642855,250.809171902763,181.053814803124,89.5332353472237,72.4975275864616,77.6227343825366,89.6486303463555,58.5983012089869,295.853049179298,255.330640868472,177.022232506575,142.20055202666,145.562898512593,267.671577403666,206.271589631027,196.291672611196,198.364827802829,203.069557321628,177.586966338685,159.429993208524,87.1505662316028,84.5808983247691,106.817282072761,103.498706527162,134.948064395138,117.062252662024,87.2820492459547,141.348208671376,138.299176502343,191.372508430773,178.126968624204,108.399495881885,170.918620642182,91.1976073333583,183.406949338378,123.84483998474,90.9518599504593,73.044659897456,82.4194447186087,101.465330746923,122.124722653335,119.136192476823,179.006365101215,154.579990533065,120.566523723394,96.8534423561075,106.294524807977,97.1179232121348,105.450322402648,97.5335906499106,76.5116338816198,82.6774718122092,93.0722761064636,87.9376232592611,87.5407997339951,210.179065611301,452.18538702297,361.457128279578,518.25981071591,162.858827769137,173.230924841441,89.3779926424254,64.5248821027988,160.503073291316,320.779046606494,339.259699305789,340.872830496441,325.833633723632,406.253934223991,395.071008334813,375.312510128884,337.290581214941,360.248215142443,345.863888250216,112.609272128832,80.2039995536072,135.221015757274,112.315303285552,139.602366310236,173.915958993713,157.572930011345,159.059064188426,147.943755621827,152.629115905334,165.268503528436,156.748489691829,178.106147207716,146.87369961677,146.805058650548,137.172583089525,128.16806449501,148.540099757053,167.718961626946,194.596972417673,212.236067226572,179.073088414772,174.296854851492,164.241450794531,166.291275193889,147.229417731517,160.610760182294,194.671586464004,184.693594830372,189.104945548658,148.531042691466,137.315248431535,170.240113958591,143.006704414647,159.340860670423,125.155099546911,171.237937382039,129.782116645172,171.96821052989,207.797116810584,268.966689319689 | |phase1_expression=196.022188856268,493.800201809696,518.244133664681,639.106878491332,521.432454874147,160.156825403943,180.11534589915,168.505937091257,22.2446180999633,28.0877431586392,12.1564757440109,9.01425396647301,106.315653287279,106.740311353596,341.437505861054,356.963896408263,656.88860356233,106.310749725726,103.521397372333,142.17053335234,240.07720809647,150.822954874145,257.54299209099,339.503921167609,358.566706307987,641.991335880593,502.268487521481,375.350887338819,460.426745342794,380.565495937495,228.160695464309,393.083986871512,320.448754331561,396.204202538597,168.689345934744,189.008791772606,157.210404322024,431.087579659015,485.20924894928,480.594796967947,508.232005658796,586.053026094346,456.865242202316,422.132030672111,408.954540539522,394.258423643292,1046.05722739333,850.952185352883,704.094215663982,1085.50212653172,541.887438111778,809.32693737479,114.092172119261,153.776774106405,107.213921926446,539.987556239453,582.522483395492,546.096745721811,189.570523825443,241.748877527319,289.027119998818,591.961397524774,625.174241666131,841.856185516749,980.955431666439,1101.9546582814,797.835094310512,1371.65934999795,131.167359570224,189.818349294357,159.426320704348,379.630158272655,415.453725529985,135.964787128599,147.889561781139,192.116726401494,461.385541387439,349.735619015329,402.449117131358,166.176722540044,193.679341506301,177.631459359855,623.694819769085,538.001055190286,388.413145848651,214.194981639356,232.635326425734,163.099515097138,210.064460306253,263.895887892895,232.181455450044,482.697794986558,412.742599560605,477.09762140783,346.980606917055,331.987923339126,342.403496281211,660.417499989974,904.315082022586,1000.65767501328,247.180201708074,397.812079984385,86.6337815002595,35.5533351576666,418.260691233666,410.94970180061,512.60178724499,278.722850394225,35.9923658269569,171.895997037067,166.54591369549,254.53313986895,225.541956316425,289.839637782693,151.689432205059,281.870164352462,217.03718167078,468.646515777434,138.88385665613,115.50153086245,139.350998148508,159.523958281488,123.018562403961,164.54280792049,177.401360670996,255.457055208591,261.196971422906,441.528410011148,275.234111840258,200.419875523653,209.99277669375,99.0156294649371,202.157684383618,189.485153881775,263.059664412403,218.214498826134,87.2763348197211,140.455469818795,223.912363972236,336.496527562472,125.956588787897,200.014830857121,143.869641714474,144.827329940122,87.2227919120023,110.049685724686,132.494238527457,229.728593216246,110.370812381615,65.9980219785689,68.9728406722679,101.926015578822,76.4629935370394,73.8294593026993,76.9625190165709,104.891058613346,396.048237644664,332.493495992212,207.723518058178,155.344329401626,168.858763186389,207.071370680167,140.38962820203,185.942199001297,190.05708307725,206.722676883113,236.885413435864,175.264778893121,176.572718957165,255.444574107072,257.960951974913,415.207964287944,363.135890691398,391.614329942765,183.583125096483,77.5900777339805,432.187768142808,284.813260296637,105.364395764406,111.47360249301,99.0990777566898,124.842101741849,189.910849443519,227.890300082846,294.682547219142,365.302281577856,235.501090645853,275.952626721076,203.9324351266,225.60367157221,284.653811684972,271.429555445702,162.924726918697,110.249814668388,78.8954149711563,140.723067541112,160.592659374794,110.393780507361,155.245698640052,349.097999971759,376.168951907934,405.853272138802,288.151953528709,160.838681910315,175.920300626317,218.116249013308,212.394547093763,225.018290049005,309.879661617988,205.70273827733,155.001276796934,230.082464251612,71.8841032636773,164.11415792181,179.109624367758,159.12469310668,243.262892735713,265.826380271215,196.023134766768,149.887706710453,77.0824338570782,105.072208094841,111.008487440461,131.492412091825,163.059894006919,130.154143121152,93.7929107431836,129.335378754885,90.4108538287952,210.564359409723,213.956692531845,213.212712349148,508.166626875348,374.751016151091,232.604501138004,243.652146987079,293.807579677659,247.082235336364,217.869542405602,336.291275036225,258.085723482498,304.932659295675,219.085595494256,206.94697902691,191.161262362694,159.089010303324,257.459606265233,263.322527978092,190.528708970224,142.345343174861,110.287446206825,152.42415673917,85.678540619981,87.1042249294987,144.692200790559,169.460884036177,164.464014988825,172.007832737379,190.469720908098,172.778553144487,126.888291945597,113.058989867504,149.015904164814,105.556277150563,174.994890234498,172.236357224472,126.303093734655,115.059039086007,142.811986896161,125.387165493481,90.9755398584863,110.588666913284,103.99498102054,174.458415842665,202.052340642855,250.809171902763,181.053814803124,89.5332353472237,72.4975275864616,77.6227343825366,89.6486303463555,58.5983012089869,295.853049179298,255.330640868472,177.022232506575,142.20055202666,145.562898512593,267.671577403666,206.271589631027,196.291672611196,198.364827802829,203.069557321628,177.586966338685,159.429993208524,87.1505662316028,84.5808983247691,106.817282072761,103.498706527162,134.948064395138,117.062252662024,87.2820492459547,141.348208671376,138.299176502343,191.372508430773,178.126968624204,108.399495881885,170.918620642182,91.1976073333583,183.406949338378,123.84483998474,90.9518599504593,73.044659897456,82.4194447186087,101.465330746923,122.124722653335,119.136192476823,179.006365101215,154.579990533065,120.566523723394,96.8534423561075,106.294524807977,97.1179232121348,105.450322402648,97.5335906499106,76.5116338816198,82.6774718122092,93.0722761064636,87.9376232592611,87.5407997339951,210.179065611301,452.18538702297,361.457128279578,518.25981071591,162.858827769137,173.230924841441,89.3779926424254,64.5248821027988,160.503073291316,320.779046606494,339.259699305789,340.872830496441,325.833633723632,406.253934223991,395.071008334813,375.312510128884,337.290581214941,360.248215142443,345.863888250216,112.609272128832,80.2039995536072,135.221015757274,112.315303285552,139.602366310236,173.915958993713,157.572930011345,159.059064188426,147.943755621827,152.629115905334,165.268503528436,156.748489691829,178.106147207716,146.87369961677,146.805058650548,137.172583089525,128.16806449501,148.540099757053,167.718961626946,194.596972417673,212.236067226572,179.073088414772,174.296854851492,164.241450794531,166.291275193889,147.229417731517,160.610760182294,194.671586464004,184.693594830372,189.104945548658,148.531042691466,137.315248431535,170.240113958591,143.006704414647,159.340860670423,125.155099546911,171.237937382039,129.782116645172,171.96821052989,207.797116810584,268.966689319689 | ||
|short_description=p1@Gpx4 | |short_description=p1@Gpx4 | ||
}} | }} |
Latest revision as of 09:22, 26 September 2015
Short description: | p1@Gpx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 113bp_to_NM_008162, uc007gbk.1_5end |
EntrezGene: | Gpx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.54e-11 | 70 |
stem cell | 7.30e-10 | 97 |
somatic stem cell | 7.71e-09 | 91 |
multi fate stem cell | 7.71e-09 | 91 |
motile cell | 8.97e-07 | 54 |