FFCP PHASE1:Mm9::chr17:48548802..48548850,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=363 | |MCL_coexpression_id=363 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48548802..48548850,- | |||
|description=CAGE_peak_at_chr17:48548802..48548850,- | |description=CAGE_peak_at_chr17:48548802..48548850,- | ||
|id=chr17:48548802..48548850,- | |id=chr17:48548802..48548850,- | ||
|ontology_enrichment_celltype=CL:0000144!6.22e-12!121;CL:0000012!6.22e-12!121;CL:0000988!2.73e-11!32;CL:0002032!2.73e-11!32;CL:0000037!2.73e-11!32;CL:0000566!2.73e-11!32;CL:0000837!2.73e-11!32;CL:0002371!1.22e-10!118;CL:0000063!1.35e-10!66;CL:0000034!3.41e-10!97;CL:0000723!3.89e-10!91;CL:0000048!3.89e-10!91;CL:0000548!2.70e-09!115;CL:0000004!2.70e-09!115;CL:0000255!2.70e-09!115;CL:0002031!5.82e-08!25 | |ontology_enrichment_celltype=CL:0000144!6.22e-12!121;CL:0000012!6.22e-12!121;CL:0000988!2.73e-11!32;CL:0002032!2.73e-11!32;CL:0000037!2.73e-11!32;CL:0000566!2.73e-11!32;CL:0000837!2.73e-11!32;CL:0002371!1.22e-10!118;CL:0000063!1.35e-10!66;CL:0000034!3.41e-10!97;CL:0000723!3.89e-10!91;CL:0000048!3.89e-10!91;CL:0000548!2.70e-09!115;CL:0000004!2.70e-09!115;CL:0000255!2.70e-09!115;CL:0002031!5.82e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.32e-12,97;CL:0000723,1.53e-12,91;CL:0000048,1.53e-12,91;CL:0000988,4.42e-12,32;CL:0002032,4.42e-12,32;CL:0000037,4.42e-12,32;CL:0000837,4.42e-12,32;CL:0002031,1.67e-08,25;CL:0002320,1.37e-07,46;CL:0000134,1.37e-07,46;CL:0000542,5.94e-07,13;CL:0000051,5.94e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-07,46 | |||
|phase1_expression=2.88267924788629,3.83872948403297,1.81999695755814,9.0739263392049,9.01612313903425,2.85394762250213,1.86890112476421,13.5579489613655,11.5446752164367,11.7032263160997,3.25314139628459,3.03134204182278,8.38883576662908,6.46910977900581,1.99865857089398,2.42970320867791,0.699561878128147,4.73193248037357,4.11343300817216,8.91218268775863,12.5013636522073,2.28369187762036,1.04479915655574,0.95995453676044,1.83527424853736,5.7423196411502,1.29228598847722,1.939241094173,1.14014051673824,1.51218077855958,2.43903561720835,25.4012269383852,21.52726756546,15.8481681015439,9.53210345179206,3.65716219788683,6.12508068787107,20.5080499061085,16.4080422349998,12.0410461113974,45.8820560664191,15.7100461540443,13.5942898848723,1.00717454380462,1.21652317463417,2.75320128242522,0.782391344348039,2.61630187656536,0.659058548203415,1.36100929351998,0.55994568650145,1.43752564364972,19.9661301208706,18.1340535502836,6.38578218370682,0.257259436035947,0,0,2.42779753031517,3.1739458756322,0,0.677689064138264,1.77858959222228,1.7997994345628,3.9554654502679,0,0.599200221036809,3.45796474789399,1.97010263386108,3.10513658162888,1.68259969081106,2.57085885963423,0.662605622854841,1.83736198822431,2.20444583341944,3.67687514644008,0,1.53224805702225,0.46081959976873,1.31886287730194,1.28082701043374,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,1.47314292736834,1.28134512719193,1.4911955666024,0.075726193333184,0.68014404096107,10.7249860819621,0,1.3599426674155,0,0,0.448026887097336,1.12355536105401,0.340860645156116,1.03914401841148,0.70667914902068,2.11265129665021,5.13305909657271,0,0,4.11332977921307,5.06719730950197,7.07734223020697,2.2836775943812,0.258937883647172,0.593768556259299,1.38788261412909,1.52232739156071,0.461230994512117,0.452167921657868,1.52865319276416,0.753999547978053,0.741584903203122,0.433798070759735,0,0.323533699894818,0.883366073841574,0.969750506270444,0,1.75668478206928,1.8850203613211,0.766371165625774,6.4700167233197,17.9970819298022,5.46401976414178,1.19832511523858,0.457500602818626,2.01046963380583,1.73824320192276,1.02286182932132,1.0389402227978,0.973447578406546,2.74966282395854,2.11491850037158,2.0217820674694,1.05220927943237,2.73252930221678,2.5289231487682,2.52086981727489,2.26057226753573,3.74200745332303,1.7935920839879,2.62364828767241,1.03481348295606,2.58681591519411,3.02569728268511,2.81521798662318,0.657587197282725,0.278047249225598,1.0447564995665,0.411564272815887,1.19420560091096,4.21327912387941,8.23513302767089,5.39910648851626,0.414251545071004,0.703578179943289,1.44049649168812,0.473489471170421,0.787056926989615,1.54267112887378,0.697601834251224,0.268273401399619,1.28441876603886,0.16455984991348,0,0.162137619091711,0,0.658650345873152,0.268412837520744,1.26173969138476,2.6755199218614,0.991256348951394,1.05780226665418,3.19932375802851,1.39342003116263,1.80414445850931,0.80673409849337,0.444756087689741,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,1.1948476395262,4.55202962287396,1.94222471436539,1.1270773567308,2.44381593414377,1.55161989734101,3.50679099451593,1.07502113111237,0.738050739898011,1.255989822731,1.1105744752962,0.296452627087149,1.66845105716094,0.589676985339609,1.12431056192427,0.608580364165509,1.20588579876208,0.763877555344259,0,0.648540907100142,1.09824565275233,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.369506380333209,2.4633883530163,1.46668478797823,1.52770577197669,0.938760993154008,0.335012514883631,1.19021820443007,1.75620283072019,0.630540576424764,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,1.3018415272336,0,4.35124547054968,0.491764273019036,0.275936746304732,0.80275294993896,0.937693492737625,0.327869890753351,1.26235463602186,3.15508219416257,2.73307121007647,4.73931475012158,2.15071918157297,4.01037613348309,2.83076530788832,4.04810701674894,2.04579100537918,3.16230222357219,1.92792789853084,0.283880170416537,1.06839362200353,2.44330439030364,0.164970122972535,1.32745138339963,3.15614827001476,1.209294227859,0.565815239267694,1.47650946440386,1.22974059177571,1.29214146584111,0.363533729477506,1.42598951353889,0.632073515871632,0,3.09406629744561,1.02131881726136,2.70091641046965,4.39819524861365,2.35770738534752,2.30542303734956,2.14042581122485,1.97458824722545,7.00269382963578,0.469343416127421,0.847328283455281,0.220528398054962,0.65954501176592,0.807322133479528,1.08563264870681,0.119372344003136,0.328281799490123,0.291480836629851,0.741701208042039,1.19609616558497,2.27025554759545,1.29636169158798,1.88368457004691,1.23024804948923,1.14389086603261,6.96911562974807,8.53703859174314,7.32459861163446,1.90934123603023,3.32152793260192,1.62655573701479,0.540026704109006,0.627264888043406,0.655087691238533,0.674321731924103,1.07449492442937,1.30877970992015,0.777689839750757,0.621339313086926,86.2450196186811,2.0932316446157,1.15820943319968,0.777804753376191,1.42075805825504,1.520605129417,1.17357238645754,1.5624526181274,1.25831213310853,30.6811833449028,35.4276907697175,0,1.41907650703115,1.23253148597793,0.389762468933385,1.25318686967237,0.993406773906324,1.44234539423963,0.590758108698309,1.00966449948148,1.143102099825,0.907435666231565,0.682205165178267,1.34696578296461,2.10378423926824,0,0.221985953374065,0.807424709485281,0.335769232728157,0.579568782096571,0.375364950902364,0.915758121336325,0.643105137237198,0.501572104035363,1.12950368523413,0.920650473014354,1.14579102687879,1.71853182343688,4.11049511862385,2.2661816921691,0,0.45032120322422,0.453142408984205,1.03552062350364,2.69847103718859,3.19219898720825,2.21953687480374,1.94485373654635,1.04806581313991,0.735374033800057,0.222246727801615,0.618105171716683,0,1.01078884705519,0.760437899670719,0.188626341386076,0.655490552289177,0.960377286073039,0.918967503289812,0,0.695305955669133,1.15745532278223,1.23625770240992,0.441596760403192,0.342869252385415,1.4198064492747,0.953744759789284,0.581385666529314,1.12931256498397,0.423073039458382,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.619747364743864,0.964533054905707,1.74867404556562,0.701794825336225,0.644613162144895,1.3390183244819,0.661774257358546,0.463735671240843 | |phase1_expression=2.88267924788629,3.83872948403297,1.81999695755814,9.0739263392049,9.01612313903425,2.85394762250213,1.86890112476421,13.5579489613655,11.5446752164367,11.7032263160997,3.25314139628459,3.03134204182278,8.38883576662908,6.46910977900581,1.99865857089398,2.42970320867791,0.699561878128147,4.73193248037357,4.11343300817216,8.91218268775863,12.5013636522073,2.28369187762036,1.04479915655574,0.95995453676044,1.83527424853736,5.7423196411502,1.29228598847722,1.939241094173,1.14014051673824,1.51218077855958,2.43903561720835,25.4012269383852,21.52726756546,15.8481681015439,9.53210345179206,3.65716219788683,6.12508068787107,20.5080499061085,16.4080422349998,12.0410461113974,45.8820560664191,15.7100461540443,13.5942898848723,1.00717454380462,1.21652317463417,2.75320128242522,0.782391344348039,2.61630187656536,0.659058548203415,1.36100929351998,0.55994568650145,1.43752564364972,19.9661301208706,18.1340535502836,6.38578218370682,0.257259436035947,0,0,2.42779753031517,3.1739458756322,0,0.677689064138264,1.77858959222228,1.7997994345628,3.9554654502679,0,0.599200221036809,3.45796474789399,1.97010263386108,3.10513658162888,1.68259969081106,2.57085885963423,0.662605622854841,1.83736198822431,2.20444583341944,3.67687514644008,0,1.53224805702225,0.46081959976873,1.31886287730194,1.28082701043374,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,1.47314292736834,1.28134512719193,1.4911955666024,0.075726193333184,0.68014404096107,10.7249860819621,0,1.3599426674155,0,0,0.448026887097336,1.12355536105401,0.340860645156116,1.03914401841148,0.70667914902068,2.11265129665021,5.13305909657271,0,0,4.11332977921307,5.06719730950197,7.07734223020697,2.2836775943812,0.258937883647172,0.593768556259299,1.38788261412909,1.52232739156071,0.461230994512117,0.452167921657868,1.52865319276416,0.753999547978053,0.741584903203122,0.433798070759735,0,0.323533699894818,0.883366073841574,0.969750506270444,0,1.75668478206928,1.8850203613211,0.766371165625774,6.4700167233197,17.9970819298022,5.46401976414178,1.19832511523858,0.457500602818626,2.01046963380583,1.73824320192276,1.02286182932132,1.0389402227978,0.973447578406546,2.74966282395854,2.11491850037158,2.0217820674694,1.05220927943237,2.73252930221678,2.5289231487682,2.52086981727489,2.26057226753573,3.74200745332303,1.7935920839879,2.62364828767241,1.03481348295606,2.58681591519411,3.02569728268511,2.81521798662318,0.657587197282725,0.278047249225598,1.0447564995665,0.411564272815887,1.19420560091096,4.21327912387941,8.23513302767089,5.39910648851626,0.414251545071004,0.703578179943289,1.44049649168812,0.473489471170421,0.787056926989615,1.54267112887378,0.697601834251224,0.268273401399619,1.28441876603886,0.16455984991348,0,0.162137619091711,0,0.658650345873152,0.268412837520744,1.26173969138476,2.6755199218614,0.991256348951394,1.05780226665418,3.19932375802851,1.39342003116263,1.80414445850931,0.80673409849337,0.444756087689741,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,1.1948476395262,4.55202962287396,1.94222471436539,1.1270773567308,2.44381593414377,1.55161989734101,3.50679099451593,1.07502113111237,0.738050739898011,1.255989822731,1.1105744752962,0.296452627087149,1.66845105716094,0.589676985339609,1.12431056192427,0.608580364165509,1.20588579876208,0.763877555344259,0,0.648540907100142,1.09824565275233,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.369506380333209,2.4633883530163,1.46668478797823,1.52770577197669,0.938760993154008,0.335012514883631,1.19021820443007,1.75620283072019,0.630540576424764,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,1.3018415272336,0,4.35124547054968,0.491764273019036,0.275936746304732,0.80275294993896,0.937693492737625,0.327869890753351,1.26235463602186,3.15508219416257,2.73307121007647,4.73931475012158,2.15071918157297,4.01037613348309,2.83076530788832,4.04810701674894,2.04579100537918,3.16230222357219,1.92792789853084,0.283880170416537,1.06839362200353,2.44330439030364,0.164970122972535,1.32745138339963,3.15614827001476,1.209294227859,0.565815239267694,1.47650946440386,1.22974059177571,1.29214146584111,0.363533729477506,1.42598951353889,0.632073515871632,0,3.09406629744561,1.02131881726136,2.70091641046965,4.39819524861365,2.35770738534752,2.30542303734956,2.14042581122485,1.97458824722545,7.00269382963578,0.469343416127421,0.847328283455281,0.220528398054962,0.65954501176592,0.807322133479528,1.08563264870681,0.119372344003136,0.328281799490123,0.291480836629851,0.741701208042039,1.19609616558497,2.27025554759545,1.29636169158798,1.88368457004691,1.23024804948923,1.14389086603261,6.96911562974807,8.53703859174314,7.32459861163446,1.90934123603023,3.32152793260192,1.62655573701479,0.540026704109006,0.627264888043406,0.655087691238533,0.674321731924103,1.07449492442937,1.30877970992015,0.777689839750757,0.621339313086926,86.2450196186811,2.0932316446157,1.15820943319968,0.777804753376191,1.42075805825504,1.520605129417,1.17357238645754,1.5624526181274,1.25831213310853,30.6811833449028,35.4276907697175,0,1.41907650703115,1.23253148597793,0.389762468933385,1.25318686967237,0.993406773906324,1.44234539423963,0.590758108698309,1.00966449948148,1.143102099825,0.907435666231565,0.682205165178267,1.34696578296461,2.10378423926824,0,0.221985953374065,0.807424709485281,0.335769232728157,0.579568782096571,0.375364950902364,0.915758121336325,0.643105137237198,0.501572104035363,1.12950368523413,0.920650473014354,1.14579102687879,1.71853182343688,4.11049511862385,2.2661816921691,0,0.45032120322422,0.453142408984205,1.03552062350364,2.69847103718859,3.19219898720825,2.21953687480374,1.94485373654635,1.04806581313991,0.735374033800057,0.222246727801615,0.618105171716683,0,1.01078884705519,0.760437899670719,0.188626341386076,0.655490552289177,0.960377286073039,0.918967503289812,0,0.695305955669133,1.15745532278223,1.23625770240992,0.441596760403192,0.342869252385415,1.4198064492747,0.953744759789284,0.581385666529314,1.12931256498397,0.423073039458382,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.619747364743864,0.964533054905707,1.74867404556562,0.701794825336225,0.644613162144895,1.3390183244819,0.661774257358546,0.463735671240843 | ||
|short_description=p@chr17:48548802..48548850,- | |short_description=p@chr17:48548802..48548850,- | ||
}} | }} |
Latest revision as of 01:25, 5 August 2015
Short description: | p@chr17:48548802..48548850, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48548802..48548850, - |
Coexpression cluster: | MCL_coexpression_mm9:363 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.32e-12 | 97 |
somatic stem cell | 1.53e-12 | 91 |
multi fate stem cell | 1.53e-12 | 91 |
hematopoietic cell | 4.42e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.42e-12 | 32 |
hematopoietic stem cell | 4.42e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.42e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.67e-08 | 25 |
connective tissue cell | 1.37e-07 | 46 |
mesenchymal cell | 1.37e-07 | 46 |
lymphocyte | 5.94e-07 | 13 |
common lymphoid progenitor | 5.94e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.37e-07 | 46 |