FFCP PHASE1:Hg19::chr2:172398159..172398180,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:172398159..172398180,+
|short_description=p@chr2:172398159..172398180,+
|description=CAGE_peak_at_chr2:172398159..172398180,+
|association_with_transcript=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:172398159..172398180,+ | |||
|description=CAGE_peak_at_chr2:172398159..172398180,+ | |||
|id=chr2:172398159..172398180,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.51e-07!75;CL:0000055!1.88e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.22e-10;13!CL:0002615;1.36e-09;3!CL:0000153;1.31e-07;9!CL:0000447;1.31e-07;9!CL:0002561;2.77e-07;2!CL:0002617;9.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.61e-11,15;CL:0002615,1.54e-09,3;CL:0000153,1.71e-07,9;CL:0000447,1.71e-07,9;CL:0002561,2.60e-07,2;CL:0002617,4.97e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.75e-15;9!UBERON:0000042;2.75e-15;9!UBERON:0003688;5.47e-12;6!UBERON:0002358;5.47e-12;6!UBERON:0003684;5.47e-12;6!UBERON:0001178;5.47e-12;6!UBERON:0005933;2.77e-07;2!UBERON:0005942;2.77e-07;2!UBERON:0005932;2.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.22e-12,6;UBERON:0002358,4.22e-12,6;UBERON:0003684,4.22e-12,6;UBERON:0001178,4.22e-12,6;UBERON:0004457,3.13e-11,12;UBERON:0000042,3.13e-11,12;UBERON:0005933,2.60e-07,2;UBERON:0005942,2.60e-07,2;UBERON:0005932,2.60e-07,2 | |||
|phase1_expression=1.99846217197612,5.35251309727458,1.26858963686374,8.00586386825043,4.02264984984559,6.10636966870258,0,0,1.30592814099919,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.895661896959697,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,1.30361867064741,0,1.45990461090791,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,2.86836620748814,2.12801029319014,1.12135520028461,0,0.98667019366864,0.311211035399766,0.538842688278752,0.163461903113459,0.454072282934794,1.15235184896,0,0.312160076830321,0.570471821544449,0.747243402759005,0.23486899728753,0.323745888736263,0,0.408308342509787,0.122834317311768,0.516628905878827,0,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.612975591598039,0.901428353439581,0.113432183160021,0.179389635688862,0.213557388818567,0.847727604638247,0,0.618315175430633,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0.644349290496095,2.26304479546337,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,1.28648187638577,0,4.64367928031979,5.77503585335668,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0,1.14861935834114,0,1.59259437334337,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.24782516918484,5.88815663030634,1.26161932027148,0.937131319941706,0.300946099727719,0,2.0694614258501,0.664225598535437,0,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0.153461973288062,1.68396056659844,1.66580894032411,0,2.41280881715411,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0,0.459257792658427,0.182091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0.127612712494584,0,1.39453664789186,0.62962469366128,0,0,0,0,0,0.286249773483982,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0.899362287916574,0,0.589062011728432,0,1.58510321173008,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.845086807596724,0.143411352204052,0,0.35667105148125,0,5.06658324714394,3.62224382255892,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.422008249231538,0.556543525114529,0,0,0.996239941255349,0,0,0.20453736500431,0.369254416383208,0.933118762985422,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,1.5991043280559,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,4.01288823649394,0.702793337176017,0,0,0,0.394584402849391,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0,0,0.85381197895741,0.799238438328521,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,1.28767814440971,0,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0,0,2.71499800876856,0,1.30634944043764,0,0,0.851940108927109,0.226624183040251,0.146552233678082,0,0,0,0,0,0.320362237703084,0.157204305099666,4.14239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0,0.732157589411779,0.250381861413,0,0.332787154610557,0.124192805882767,0,0,0.303298235083296,0,0.705797459094515,0,0,0.149254802886874,0.233713309847224,0,0.947015026375446,0.754703705257725,1.77962244319307,2.05956061557231,1.96600200892211,0.621748802331122,0.591420599958536,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0.406870733204662,0.363697318405119,0.322231671127465,2.32016879939247,0,0.400027764663154,0.686791410365586,1.34699795506368,0,0,0.428883182749851,0,0.453411851024545,0,0,0.537266523244462,1.54400723580486,1.09642024789354,1.76689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0.389720617678777,0.132864840313363,0.163565394255844,0.327609848846413,0.491545817507439,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,5.64281509905094,0.918736432059601,0.192687675289379,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.526472298444801,0,0,0,0.655087670040387,0,0.135075169236789,0,0,0.0634158101939068,0,0,3.47347824872506,0.175871244359621,0.127762427639595,0,0,0,0,0.177404740325278,0.115233987555779,0.514464028312255,0.0679697329768317,0,0,0,0.470958557103084,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0.62164849248911,2.90221411059715,0,0,0.118332000730565,0.170426809518315,0.846774100381858,0.9164274741762,0.31020638566432,0,1.00669888618013,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0.237840181555137,0,0,0,1.00326405540328,0.218559560503957,0,2.69663153929296,0,0.588925401344836,0,0.4226557275834,0.509781344063451,0,0.0644578879735772,0.0999411559249289,0,0,0,1.46067277649303,0,0.286679166302903,0.315543124386369,0.0679914901909147,0,2.645134202577,0.743990036333503,3.69740502905135,3.02838593486652,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,1.49263787330687,2.14257988317366,0.129177819672012,0,0.33639558774184,1.40023748211963,1.21270313374932,1.08858373948481,0.684466602170562,0.134704106029175,0.215166616178029,0.99798106963804,0,0.213454691755431,0,0.0898252021065869,0,1.1001729976458,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=1.99846217197612,5.35251309727458,1.26858963686374,8.00586386825043,4.02264984984559,6.10636966870258,0,0,1.30592814099919,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.895661896959697,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,1.30361867064741,0,1.45990461090791,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,2.86836620748814,2.12801029319014,1.12135520028461,0,0.98667019366864,0.311211035399766,0.538842688278752,0.163461903113459,0.454072282934794,1.15235184896,0,0.312160076830321,0.570471821544449,0.747243402759005,0.23486899728753,0.323745888736263,0,0.408308342509787,0.122834317311768,0.516628905878827,0,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.612975591598039,0.901428353439581,0.113432183160021,0.179389635688862,0.213557388818567,0.847727604638247,0,0.618315175430633,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0.644349290496095,2.26304479546337,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,1.28648187638577,0,4.64367928031979,5.77503585335668,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0,1.14861935834114,0,1.59259437334337,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.24782516918484,5.88815663030634,1.26161932027148,0.937131319941706,0.300946099727719,0,2.0694614258501,0.664225598535437,0,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0.153461973288062,1.68396056659844,1.66580894032411,0,2.41280881715411,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0,0.459257792658427,0.182091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0.127612712494584,0,1.39453664789186,0.62962469366128,0,0,0,0,0,0.286249773483982,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0.899362287916574,0,0.589062011728432,0,1.58510321173008,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.845086807596724,0.143411352204052,0,0.35667105148125,0,5.06658324714394,3.62224382255892,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.422008249231538,0.556543525114529,0,0,0.996239941255349,0,0,0.20453736500431,0.369254416383208,0.933118762985422,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,1.5991043280559,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,4.01288823649394,0.702793337176017,0,0,0,0.394584402849391,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0,0,0.85381197895741,0.799238438328521,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,1.28767814440971,0,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0,0,2.71499800876856,0,1.30634944043764,0,0,0.851940108927109,0.226624183040251,0.146552233678082,0,0,0,0,0,0.320362237703084,0.157204305099666,4.14239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0,0.732157589411779,0.250381861413,0,0.332787154610557,0.124192805882767,0,0,0.303298235083296,0,0.705797459094515,0,0,0.149254802886874,0.233713309847224,0,0.947015026375446,0.754703705257725,1.77962244319307,2.05956061557231,1.96600200892211,0.621748802331122,0.591420599958536,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0.406870733204662,0.363697318405119,0.322231671127465,2.32016879939247,0,0.400027764663154,0.686791410365586,1.34699795506368,0,0,0.428883182749851,0,0.453411851024545,0,0,0.537266523244462,1.54400723580486,1.09642024789354,1.76689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0.389720617678777,0.132864840313363,0.163565394255844,0.327609848846413,0.491545817507439,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,5.64281509905094,0.918736432059601,0.192687675289379,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.526472298444801,0,0,0,0.655087670040387,0,0.135075169236789,0,0,0.0634158101939068,0,0,3.47347824872506,0.175871244359621,0.127762427639595,0,0,0,0,0.177404740325278,0.115233987555779,0.514464028312255,0.0679697329768317,0,0,0,0.470958557103084,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0.62164849248911,2.90221411059715,0,0,0.118332000730565,0.170426809518315,0.846774100381858,0.9164274741762,0.31020638566432,0,1.00669888618013,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0.237840181555137,0,0,0,1.00326405540328,0.218559560503957,0,2.69663153929296,0,0.588925401344836,0,0.4226557275834,0.509781344063451,0,0.0644578879735772,0.0999411559249289,0,0,0,1.46067277649303,0,0.286679166302903,0.315543124386369,0.0679914901909147,0,2.645134202577,0.743990036333503,3.69740502905135,3.02838593486652,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,1.49263787330687,2.14257988317366,0.129177819672012,0,0.33639558774184,1.40023748211963,1.21270313374932,1.08858373948481,0.684466602170562,0.134704106029175,0.215166616178029,0.99798106963804,0,0.213454691755431,0,0.0898252021065869,0,1.1001729976458,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr2:172398159..172398180,+ | |||
}} | }} |
Latest revision as of 02:26, 29 July 2015
Short description: | p@chr2:172398159..172398180, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:172398159..172398180, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.61e-11 | 15 |
adipocyte of omentum tissue | 1.54e-09 | 3 |
GAG secreting cell | 1.71e-07 | 9 |
carbohydrate secreting cell | 1.71e-07 | 9 |
outer root sheath cell | 2.60e-07 | 2 |
adipocyte of breast | 4.97e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.22e-12 | 6 |
peritoneum | 4.22e-12 | 6 |
abdominal cavity | 4.22e-12 | 6 |
visceral peritoneum | 4.22e-12 | 6 |
cavity lining | 3.13e-11 | 12 |
serous membrane | 3.13e-11 | 12 |
hair root sheath | 2.60e-07 | 2 |
hair outer root sheath | 2.60e-07 | 2 |
bulb of hair follicle | 2.60e-07 | 2 |