FFCP PHASE1:Mm9::chr6:42301541..42301556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=481 | |MCL_coexpression_id=481 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:42301541..42301556,+ | |||
|description=CAGE_peak_at_chr6:42301541..42301556,+ | |description=CAGE_peak_at_chr6:42301541..42301556,+ | ||
|id=chr6:42301541..42301556,+ | |id=chr6:42301541..42301556,+ | ||
|ontology_enrichment_celltype=CL:0000355!5.18e-07!9 | |ontology_enrichment_celltype=CL:0000355!5.18e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.57e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.38e-07!33;UBERON:0001134!5.18e-07!9;UBERON:0002036!5.18e-07!9;UBERON:0002385!5.18e-07!9;UBERON:0000486!5.18e-07!9;UBERON:0001015!5.18e-07!9;UBERON:0004290!5.18e-07!9;UBERON:0003082!5.18e-07!9 | |ontology_enrichment_uberon=UBERON:0004872!2.38e-07!33;UBERON:0001134!5.18e-07!9;UBERON:0002036!5.18e-07!9;UBERON:0002385!5.18e-07!9;UBERON:0000486!5.18e-07!9;UBERON:0001015!5.18e-07!9;UBERON:0004290!5.18e-07!9;UBERON:0003082!5.18e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.57e-07,9;UBERON:0002036,1.57e-07,9;UBERON:0002385,1.57e-07,9;UBERON:0000486,1.57e-07,9;UBERON:0007503,1.57e-07,9;UBERON:0001015,1.57e-07,9;UBERON:0002329,1.57e-07,9;UBERON:0003082,1.57e-07,9;UBERON:0003059,1.57e-07,9;UBERON:0007282,1.57e-07,9;UBERON:0004290,1.57e-07,9;UBERON:0009618,1.57e-07,9;UBERON:0004872,3.70e-07,33 | |||
|phase1_expression=0.320297694209588,1.39590163055744,0.454999239389536,0.90739263392049,1.50268718983904,0.503637815735669,1.63528848416868,0.903863264091034,0.140788722151667,1.17032263160997,0.34243593645101,0.558405112967355,0.856003649656029,0.611942816932982,0.333109761815663,0.607425802169478,0.699561878128147,1.26184866143295,0.685572168028694,0.84877930359606,1.10556277196391,0.397163804803541,0.261199789138935,2.87986361028132,1.37645568640302,0,0.86152399231815,2.15471232685889,1.90023419456374,0.756090389279792,1.10865255327652,0,0,0,0,0.332469290716985,0,9.20769587621197,5.4693474116666,6.28228492768558,9.99993529652724,10.9287277593351,6.311634589405,8.93867407626599,8.31290836000019,5.68994931701213,1.56478268869608,1.52617609466313,1.97717564461025,4.08302788055995,2.09979632438044,2.87505128729943,0.503347818173209,1.45072428402269,2.01656279485478,8.7468208252222,3.72493471920384,7.73508138416164,0,0.528990979272033,0.633831403506179,9.14880236586657,1.77858959222228,4.94944844504769,5.93319817540185,5.6838409195688,7.19040265244171,3.84218305321555,0.414758449233911,0.945041568321835,0.420649922702764,0.571301968807607,0.883474163806454,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,0.768032666281217,0.659431438650969,0.823388792421687,1.56274011167028,2.23346399201105,0.56276261003168,0.61119299110724,0.589257170947335,1.42371680799103,0.186399445825301,0.605809546665472,0.68014404096107,3.18850937571846,0.860423876981386,4.0798280022465,1.61910957491345,1.94932925234301,0.448026887097336,0.702222100658759,3.06774580640504,3.63700406444016,2.82671659608272,0.14084341977668,2.56652954828636,0,0,2.16491041011214,1.77351905832569,2.02209778005913,1.02765491747154,1.8125651855302,1.33597925158342,1.21439728736295,1.21786191324856,1.38369298353635,1.20578112442098,2.4693628498498,0.628332956648377,2.22475470960936,3.18118585223806,5.30766331169925,0.808834249737046,2.42925670306433,1.45462575940567,1.86391761218122,1.17112318804619,3.56059401582874,1.78819938646014,5.27186547826049,1.79970819298022,1.65191295194984,0.898743836428936,0,0.251308704225729,0.521472960576829,1.02286182932132,0.41557608911912,0.486723789203273,2.95334155165917,2.11491850037158,1.26361379216837,0.420883711772948,0.910843100738926,0.459804208866946,0.900310649026746,0.753524089178575,1.02054748726992,0.640568601424249,0.562210347358373,0.258703370739016,1.94011193639558,2.26927296201383,0.879755620819744,1.31517439456545,1.11218899690239,1.39300866608867,0.411564272815887,1.79130840136644,1.40442637462647,0.51469581422943,0.852490498186778,3.93538967817454,1.64168241986767,2.52086886045421,3.07768156260773,0.983821158737019,1.85120535464854,1.86027155800326,2.68273401399619,1.5179494507732,1.48103864922132,1.14917224855367,1.62137619091711,1.46199987425332,1.3173006917463,0.939444931322602,0.630869845692382,0.411618449517138,1.32167513193519,1.58670339998127,1.06644125267617,1.39342003116263,1.15980715189884,0.605050573870028,0.667134131534611,0.190225626112559,4.2707615539006,0.988193728344065,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,1.29682829924817,0.597423819763102,2.0863469104839,0.913988100877831,2.25415471346161,0.407302655690628,0.969762435838129,1.26244475802573,0.885311519739602,0.442830443938806,0.470996183524124,0.370191491765402,0.592905254174298,1.50160595144485,0.982794975566015,1.12431056192427,1.01430060694251,1.20588579876208,0.763877555344259,1.15078454980324,2.7562988551756,0.823684239564244,10.0637744569148,0.372140947668503,0.936113019343682,0.252578877947112,0.358794827043824,0.964887042726734,2.95605104266567,0.947457058852424,2.11854469374634,1.35796068620151,2.34690248288502,2.1775813467436,3.80869825417622,2.53673742215138,4.41378403497335,7.30833475840957,3.82691444777969,2.45794972073607,1.03610989119537,2.60368305446721,7.53956419696361,2.17562273527484,2.45882136509518,0.551873492609465,0.963303539926752,1.05490517932983,6.06559297893699,0.757412781613119,1.26203287766503,5.85658116444958,1.72338718186239,2.15071918157297,2.22798674082394,0.849229592366497,2.02405350837447,3.50707029493574,1.58115111178609,0.642642632843614,2.2710413633323,2.67098405500883,3.58351310577867,1.97964147567043,1.32745138339963,0.728341908464944,0.604647113929502,0.943025398779491,2.65771703592696,2.76691633149535,1.55056975900933,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,1.81102157295856,1.07168517515796,1.24138163549592,1.42695054081656,0.658196082408484,0.608929898229199,2.81606049676452,2.54198485036584,0.441056796109924,0.98931751764888,2.9063596805263,0.965006798850494,1.43246812803764,1.14898629821543,1.7488850197791,1.11255181206306,1.87957968877638,2.47664241555867,2.59272338317596,0.941842285023455,2.1871076435364,0.457556346413045,2.88963330989554,4.47844647435706,6.08079884739465,2.86401185404534,2.37251995185852,1.01659733563424,0.972048067396211,1.67270636811575,1.09181281873089,0.674321731924103,0.909188012978695,0.785267825952089,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,2.15096037594227,2.72231663681667,2.32487682259916,2.87225413334323,2.58185925020659,2.8644964665669,3.35549902162275,1.44950472495604,0.864090018773596,0.948033361884535,1.21635129174099,1.54066435747241,0.51968329191118,1.07416017400489,1.58945083825012,1.56254084375959,0.590758108698309,1.21159739937777,0.838274873204998,0.705783295957884,0.877120926657772,0.673482891482306,0.935015217452552,0.453460767230423,1.99787358036658,6.2799699626633,4.53288464183012,3.67060228661162,3.37828455812128,3.11357761254351,0.857473516316263,3.00943262421218,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,1.35096360967266,0.453142408984205,1.03552062350364,1.03787347584177,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,0.962757628775446,1.01078884705519,1.01391719956096,1.50901073108861,1.03005658216871,0.576226371643824,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.752875043322645,0.676916863133412,1.09756783723664,0.526139422875686,0.679020569229309,1.68342681497322,0.830445126869219,0.492522411877817,0.409231043169689,0.77468420592983,0.964533054905707,2.24829520144151,0.935726433781634,2.36358159453128,2.10417165275728,2.20591419119516,0.927471342481686 | |phase1_expression=0.320297694209588,1.39590163055744,0.454999239389536,0.90739263392049,1.50268718983904,0.503637815735669,1.63528848416868,0.903863264091034,0.140788722151667,1.17032263160997,0.34243593645101,0.558405112967355,0.856003649656029,0.611942816932982,0.333109761815663,0.607425802169478,0.699561878128147,1.26184866143295,0.685572168028694,0.84877930359606,1.10556277196391,0.397163804803541,0.261199789138935,2.87986361028132,1.37645568640302,0,0.86152399231815,2.15471232685889,1.90023419456374,0.756090389279792,1.10865255327652,0,0,0,0,0.332469290716985,0,9.20769587621197,5.4693474116666,6.28228492768558,9.99993529652724,10.9287277593351,6.311634589405,8.93867407626599,8.31290836000019,5.68994931701213,1.56478268869608,1.52617609466313,1.97717564461025,4.08302788055995,2.09979632438044,2.87505128729943,0.503347818173209,1.45072428402269,2.01656279485478,8.7468208252222,3.72493471920384,7.73508138416164,0,0.528990979272033,0.633831403506179,9.14880236586657,1.77858959222228,4.94944844504769,5.93319817540185,5.6838409195688,7.19040265244171,3.84218305321555,0.414758449233911,0.945041568321835,0.420649922702764,0.571301968807607,0.883474163806454,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,0.768032666281217,0.659431438650969,0.823388792421687,1.56274011167028,2.23346399201105,0.56276261003168,0.61119299110724,0.589257170947335,1.42371680799103,0.186399445825301,0.605809546665472,0.68014404096107,3.18850937571846,0.860423876981386,4.0798280022465,1.61910957491345,1.94932925234301,0.448026887097336,0.702222100658759,3.06774580640504,3.63700406444016,2.82671659608272,0.14084341977668,2.56652954828636,0,0,2.16491041011214,1.77351905832569,2.02209778005913,1.02765491747154,1.8125651855302,1.33597925158342,1.21439728736295,1.21786191324856,1.38369298353635,1.20578112442098,2.4693628498498,0.628332956648377,2.22475470960936,3.18118585223806,5.30766331169925,0.808834249737046,2.42925670306433,1.45462575940567,1.86391761218122,1.17112318804619,3.56059401582874,1.78819938646014,5.27186547826049,1.79970819298022,1.65191295194984,0.898743836428936,0,0.251308704225729,0.521472960576829,1.02286182932132,0.41557608911912,0.486723789203273,2.95334155165917,2.11491850037158,1.26361379216837,0.420883711772948,0.910843100738926,0.459804208866946,0.900310649026746,0.753524089178575,1.02054748726992,0.640568601424249,0.562210347358373,0.258703370739016,1.94011193639558,2.26927296201383,0.879755620819744,1.31517439456545,1.11218899690239,1.39300866608867,0.411564272815887,1.79130840136644,1.40442637462647,0.51469581422943,0.852490498186778,3.93538967817454,1.64168241986767,2.52086886045421,3.07768156260773,0.983821158737019,1.85120535464854,1.86027155800326,2.68273401399619,1.5179494507732,1.48103864922132,1.14917224855367,1.62137619091711,1.46199987425332,1.3173006917463,0.939444931322602,0.630869845692382,0.411618449517138,1.32167513193519,1.58670339998127,1.06644125267617,1.39342003116263,1.15980715189884,0.605050573870028,0.667134131534611,0.190225626112559,4.2707615539006,0.988193728344065,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,1.29682829924817,0.597423819763102,2.0863469104839,0.913988100877831,2.25415471346161,0.407302655690628,0.969762435838129,1.26244475802573,0.885311519739602,0.442830443938806,0.470996183524124,0.370191491765402,0.592905254174298,1.50160595144485,0.982794975566015,1.12431056192427,1.01430060694251,1.20588579876208,0.763877555344259,1.15078454980324,2.7562988551756,0.823684239564244,10.0637744569148,0.372140947668503,0.936113019343682,0.252578877947112,0.358794827043824,0.964887042726734,2.95605104266567,0.947457058852424,2.11854469374634,1.35796068620151,2.34690248288502,2.1775813467436,3.80869825417622,2.53673742215138,4.41378403497335,7.30833475840957,3.82691444777969,2.45794972073607,1.03610989119537,2.60368305446721,7.53956419696361,2.17562273527484,2.45882136509518,0.551873492609465,0.963303539926752,1.05490517932983,6.06559297893699,0.757412781613119,1.26203287766503,5.85658116444958,1.72338718186239,2.15071918157297,2.22798674082394,0.849229592366497,2.02405350837447,3.50707029493574,1.58115111178609,0.642642632843614,2.2710413633323,2.67098405500883,3.58351310577867,1.97964147567043,1.32745138339963,0.728341908464944,0.604647113929502,0.943025398779491,2.65771703592696,2.76691633149535,1.55056975900933,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,1.81102157295856,1.07168517515796,1.24138163549592,1.42695054081656,0.658196082408484,0.608929898229199,2.81606049676452,2.54198485036584,0.441056796109924,0.98931751764888,2.9063596805263,0.965006798850494,1.43246812803764,1.14898629821543,1.7488850197791,1.11255181206306,1.87957968877638,2.47664241555867,2.59272338317596,0.941842285023455,2.1871076435364,0.457556346413045,2.88963330989554,4.47844647435706,6.08079884739465,2.86401185404534,2.37251995185852,1.01659733563424,0.972048067396211,1.67270636811575,1.09181281873089,0.674321731924103,0.909188012978695,0.785267825952089,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,2.15096037594227,2.72231663681667,2.32487682259916,2.87225413334323,2.58185925020659,2.8644964665669,3.35549902162275,1.44950472495604,0.864090018773596,0.948033361884535,1.21635129174099,1.54066435747241,0.51968329191118,1.07416017400489,1.58945083825012,1.56254084375959,0.590758108698309,1.21159739937777,0.838274873204998,0.705783295957884,0.877120926657772,0.673482891482306,0.935015217452552,0.453460767230423,1.99787358036658,6.2799699626633,4.53288464183012,3.67060228661162,3.37828455812128,3.11357761254351,0.857473516316263,3.00943262421218,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,1.35096360967266,0.453142408984205,1.03552062350364,1.03787347584177,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,0.962757628775446,1.01078884705519,1.01391719956096,1.50901073108861,1.03005658216871,0.576226371643824,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.752875043322645,0.676916863133412,1.09756783723664,0.526139422875686,0.679020569229309,1.68342681497322,0.830445126869219,0.492522411877817,0.409231043169689,0.77468420592983,0.964533054905707,2.24829520144151,0.935726433781634,2.36358159453128,2.10417165275728,2.20591419119516,0.927471342481686 | ||
|short_description=p@chr6:42301541..42301556,+ | |short_description=p@chr6:42301541..42301556,+ | ||
}} | }} |
Latest revision as of 18:33, 5 August 2015
Short description: | p@chr6:42301541..42301556, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:42301541..42301556, + |
Coexpression cluster: | MCL_coexpression_mm9:481 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.57e-07 | 9 |
striated muscle tissue | 1.57e-07 | 9 |
muscle tissue | 1.57e-07 | 9 |
multilaminar epithelium | 1.57e-07 | 9 |
epithelial vesicle | 1.57e-07 | 9 |
musculature | 1.57e-07 | 9 |
somite | 1.57e-07 | 9 |
myotome | 1.57e-07 | 9 |
presomitic mesoderm | 1.57e-07 | 9 |
presumptive segmental plate | 1.57e-07 | 9 |
dermomyotome | 1.57e-07 | 9 |
trunk paraxial mesoderm | 1.57e-07 | 9 |
splanchnic layer of lateral plate mesoderm | 3.70e-07 | 33 |