FFCP PHASE1:Hg19::chr3:120429306..120429317,-: Difference between revisions
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|id=chr3:120429306..120429317,-
|short_description=p4@RABL3
|description=CAGE_peak_4_at_RABL3_5end
|association_with_transcript=75bp_to_ENST00000468192_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285282 | |EntrezGene=285282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18072 | |HGNC=18072 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000468192_5end | |||
|cluster_id=chr3:120429306..120429317,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_RABL3_5end | |||
|id=chr3:120429306..120429317,- | |||
|ontology_enrichment_celltype=CL:0000039!4.06e-11!7;CL:0000586!4.06e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.00e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.00e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.42e-50;1 | |||
|ontology_enrichment_disease=DOID:1799!2.71e-19!1;DOID:10165!2.71e-19!1;DOID:1798!2.71e-19!1;DOID:5093!4.29e-19!4;DOID:1612!4.29e-19!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.00e-13,4;DOID:1612,1.00e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.57e-37!2;UBERON:0002757!1.57e-37!2;UBERON:0010134!1.57e-37!2;UBERON:0002784!1.57e-37!2;UBERON:0005408!1.57e-37!2;UBERON:0001899!1.57e-37!2;UBERON:0003296!2.48e-19!4;UBERON:0010133!2.48e-19!4;UBERON:0000966!1.88e-15!5;UBERON:0005388!1.88e-15!5;UBERON:0001802!1.88e-15!5;UBERON:0001894!1.77e-11!7;UBERON:0006222!1.77e-11!7;UBERON:0002360!3.27e-10!2;UBERON:0000094!3.27e-10!2;UBERON:0007645!3.27e-10!2;UBERON:0000970!8.52e-09!20;UBERON:0002104!2.10e-08!21;UBERON:0000310!3.25e-08!10;UBERON:0000020!1.01e-07!23;UBERON:0001443!1.51e-07!11;UBERON:0001032!2.02e-07!24;UBERON:0004456!2.02e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0001911;1.00e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.38e-99,2;UBERON:0002757,9.38e-99,2;UBERON:0010134,9.38e-99,2;UBERON:0005408,9.38e-99,2;UBERON:0001899,9.38e-99,2;UBERON:0003296,4.00e-50,4;UBERON:0010133,4.00e-50,4;UBERON:0002784,4.00e-50,4;UBERON:0001894,3.16e-29,7;UBERON:0006222,3.16e-29,7;UBERON:0001911,1.00e-13,4;UBERON:0005333,1.00e-13,4;UBERON:0008425,1.00e-13,4;UBERON:0005311,1.00e-13,4;UBERON:0002530,1.83e-08,59;UBERON:0000076,1.59e-07,8 | |||
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|short_description=p4@RABL3 | |||
}} | }} |
Latest revision as of 22:19, 19 September 2015
Short description: | p4@RABL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RABL3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 75bp_to_ENST00000468192_5end |
EntrezGene: | RABL3 |
HGNC: | 18072 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.38e-99 | 2 |
regional part of epithalamus | 9.38e-99 | 2 |
secretory circumventricular organ | 9.38e-99 | 2 |
circumventricular organ | 9.38e-99 | 2 |
epithalamus | 9.38e-99 | 2 |
gland of diencephalon | 4.00e-50 | 4 |
neuroendocrine gland | 4.00e-50 | 4 |
regional part of diencephalon | 4.00e-50 | 4 |
diencephalon | 3.16e-29 | 7 |
future diencephalon | 3.16e-29 | 7 |
mammary gland | 1.00e-13 | 4 |
mammary bud | 1.00e-13 | 4 |
mammary ridge | 1.00e-13 | 4 |
mammary placode | 1.00e-13 | 4 |
gland | 1.83e-08 | 59 |
external ectoderm | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.00e-13 | 4 |
breast cancer | 1.00e-13 | 4 |