FFCP PHASE1:Hg19::chr3:149290682..149290709,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:149290682..149290709,-
|short_description=p10@WWTR1
|description=CAGE_peak_10_at_WWTR1_5end
|association_with_transcript=71bp_to_AL050107_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZV5 | |UniProt=Q9GZV5 | ||
|association_with_transcript=71bp_to_AL050107_5end | |||
|cluster_id=chr3:149290682..149290709,- | |||
|description=CAGE_peak_10_at_WWTR1_5end | |||
|id=chr3:149290682..149290709,- | |||
|ontology_enrichment_celltype=CL:0000055!3.22e-23!180;CL:0000057!1.95e-13!75;CL:0000680!3.10e-11!57;CL:0000056!3.10e-11!57;CL:0000355!3.10e-11!57;CL:0000222!3.85e-11!119;CL:0000187!1.12e-09!54;CL:0000183!8.08e-09!59;CL:0000393!2.59e-08!60;CL:0000211!2.59e-08!60;CL:0000359!3.13e-08!32;CL:0000220!8.48e-08!246;CL:0002321!1.09e-07!248;CL:0000192!1.14e-07!42;CL:0000514!1.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000056;4.08e-10;4!CL:0002582;3.12e-08;3!CL:0000515;1.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.16e-10,4;CL:0002582,1.85e-08,3;CL:0000222,2.49e-08,121;CL:0000057,8.12e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000515;4.08e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.15e-15!83;UBERON:0002329!9.15e-15!83;UBERON:0003077!9.15e-15!83;UBERON:0003059!9.15e-15!83;UBERON:0007282!9.15e-15!83;UBERON:0009618!9.15e-15!83;UBERON:0007285!9.15e-15!83;UBERON:0004872!4.09e-13!84;UBERON:0004290!5.46e-13!70;UBERON:0001981!1.12e-11!60;UBERON:0007500!1.12e-11!60;UBERON:0004537!1.12e-11!60;UBERON:0006965!1.12e-11!60;UBERON:0001637!1.88e-11!42;UBERON:0003509!1.88e-11!42;UBERON:0004572!1.88e-11!42;UBERON:0002049!2.40e-11!79;UBERON:0007798!2.40e-11!79;UBERON:0002385!2.56e-11!63;UBERON:0001015!2.56e-11!63;UBERON:0000383!2.56e-11!63;UBERON:0000486!2.77e-11!82;UBERON:0001134!7.01e-11!61;UBERON:0002036!7.01e-11!61;UBERON:0003082!7.01e-11!61;UBERON:0000475!2.64e-10!365;UBERON:0004573!2.84e-10!33;UBERON:0004571!2.84e-10!33;UBERON:0000055!1.20e-09!69;UBERON:0001009!2.54e-09!113;UBERON:0004535!3.39e-09!110;UBERON:0002100!5.41e-09!216;UBERON:0000119!2.26e-08!312;UBERON:0005256!4.80e-08!143;UBERON:0000483!5.42e-08!309;UBERON:0000947!1.02e-07!21;UBERON:0010191!1.02e-07!21;UBERON:0003914!2.13e-07!118;UBERON:0000468!3.49e-07!659;UBERON:0000467!8.45e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.69e-07;33!UBERON:0004571;6.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.04e-08,71;UBERON:0003059,5.04e-08,71;UBERON:0007282,5.04e-08,71;UBERON:0004290,5.04e-08,71;UBERON:0009618,5.04e-08,71;UBERON:0003077,7.57e-08,72;UBERON:0007285,7.57e-08,72;UBERON:0007524,1.12e-07,73;UBERON:0004872,1.13e-07,83;UBERON:0004573,1.38e-07,33;UBERON:0004571,1.38e-07,33;UBERON:0002385,2.45e-07,64;UBERON:0001015,2.45e-07,64;UBERON:0000383,2.45e-07,64;UBERON:0007500,4.29e-07,59;UBERON:0001981,4.29e-07,59;UBERON:0004537,4.29e-07,59;UBERON:0006965,4.29e-07,59;UBERON:0000486,5.48e-07,83;UBERON:0007503,6.88e-07,78;UBERON:0001134,8.98e-07,62;UBERON:0002036,8.98e-07,62;UBERON:0003082,8.98e-07,62 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0,0,2.3858578411533,0.973269740605272,0.567208902984407,0.443458794925128,0.527008714158756,0,0,0.370784442784429,0,0,0,0,0,0,1.19257444420023,0,0,1.69592382577203,0.419499436209906,0,0.417989933073621,0.775250277507987,0,0,1.20848795132744,0,0.24406205754817,1.10298924103761,0.81014194788176,1.16089646769304,2.02076435363553,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0,0,1.2663051166458,0.794455084879313,0.860509862246441,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,0.933633106199299,0.404132016209064,1.47115712802113,0.151357427644931,0.576175924479999,0,1.87296046098192,1.1409436430889,0.896692083310806,0.822041490506354,0.809364721840658,1.40450806702248,2.04154171254893,0.982674538494144,1.13658359293342,3.56400857184616,0.741800787835671,0,0,1.0100166837244,1.12606667884768,4.43302584774693,0,0.30648779579902,0.45071417671979,0.567160915800105,0.538168907066586,0.427114777637135,0.423863802319124,0.900273288253207,0.618315175430633,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0.368199594569197,0,0,0.503760491138201,0.67824236924195,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.897048674762886,0,1.98013371716565,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0.285955987316295,0.542621605391443,0,1.62868092146868,0,0.791951872933429,0.602878754119172,1.74306691720059,0.299918973546171,0,0,0,0.958499421966331,0,4.27910715122155,2.60606352001643,1.43833425785268,1.43248770591916,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0.819989904948992,0.300946099727719,0,2.0694614258501,0.664225598535437,0,0.781952530212746,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0.384417447767103,0,0.160853921143607,0,1.54209693802656,1.06537035187876,2.62806899244189,4.67328986265259,1.62694529843943,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,1.16004861950546,0,0.15350367472613,0.551346289938122,0.429680979473094,0.145016693914229,0.93749290157711,0.979352392114111,0,0.384380134730212,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,1.3940745403212,1.84820148105653,2.12922412126809,0.869932992075073,1.29726953372744,0.858749320451947,0.744316738719335,0.316379424718726,0,0,0,1.90921948755562,0.78494864019923,0,0.274537029736055,0.353437207037059,0.606547444719948,0,2.10629228119491,0,0,2.11300293513511,0.136499911407986,0.282810863907425,0,0.551365343546124,0,1.75380354101505,0,1.31178950409327,0.811641507850816,0.92947049429925,1.12678241012897,0.143411352204052,0.0982490410131212,0.35667105148125,1.41904425628239,0.844430541190656,1.31717957183961,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0.20453736500431,0,0.311039587661807,0.269605053441981,0,0,0.690503839458535,0,3.33410970433911,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.202203398942031,1.60515529459758,0.468528891450678,0,0,1.45668227720456,0,0,0,0.063186579628488,0.300646838828985,0,0.664653872707185,0.330991955875499,2.5114633472578,3.58417289318877,0.853828638089378,0.693373365065693,0.173559738335131,0,0,0,0.859930162358083,0,0.219267951258557,0,0.387956065953678,0,0.2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| ||
|short_description=p10@WWTR1 | |||
}} | }} |
Latest revision as of 21:59, 15 September 2015
Short description: | p10@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_AL050107_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | Q9GZV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.16e-10 | 4 |
visceral preadipocyte | 1.85e-08 | 3 |
mesodermal cell | 2.49e-08 | 121 |
fibroblast | 8.12e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
somite | 5.04e-08 | 71 |
presomitic mesoderm | 5.04e-08 | 71 |
presumptive segmental plate | 5.04e-08 | 71 |
dermomyotome | 5.04e-08 | 71 |
trunk paraxial mesoderm | 5.04e-08 | 71 |
paraxial mesoderm | 7.57e-08 | 72 |
presumptive paraxial mesoderm | 7.57e-08 | 72 |
dense mesenchyme tissue | 1.12e-07 | 73 |
splanchnic layer of lateral plate mesoderm | 1.13e-07 | 83 |
systemic artery | 1.38e-07 | 33 |
systemic arterial system | 1.38e-07 | 33 |
muscle tissue | 2.45e-07 | 64 |
musculature | 2.45e-07 | 64 |
musculature of body | 2.45e-07 | 64 |
epithelial tube open at both ends | 4.29e-07 | 59 |
blood vessel | 4.29e-07 | 59 |
blood vasculature | 4.29e-07 | 59 |
vascular cord | 4.29e-07 | 59 |
multilaminar epithelium | 5.48e-07 | 83 |
epithelial vesicle | 6.88e-07 | 78 |
skeletal muscle tissue | 8.98e-07 | 62 |
striated muscle tissue | 8.98e-07 | 62 |
myotome | 8.98e-07 | 62 |