FFCP PHASE1:Hg19::chr3:171758360..171758369,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:171758360..171758369,+
|short_description=p5@FNDC3B
|description=CAGE_peak_5_at_FNDC3B_5end
|association_with_transcript=15bp_to_ENST00000423424_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64778 | |EntrezGene=64778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24670 | |HGNC=24670 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000423424_5end | |||
|cluster_id=chr3:171758360..171758369,+ | |||
|description=CAGE_peak_5_at_FNDC3B_5end | |||
|id=chr3:171758360..171758369,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.12e-11!24;CL:0000115!6.14e-09!35;CL:0000222!6.86e-09!119;CL:0002078!4.08e-08!44;CL:0000071!4.30e-08!18;CL:0002546!4.30e-08!18;CL:0000055!1.84e-07!180;CL:0000213!3.77e-07!57;CL:0000215!3.77e-07!57;CL:0000057!8.40e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.21e-11;24!CL:0000071;3.51e-09;18!CL:0000115;2.84e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.06e-11,24;CL:0000071,3.72e-09,18;CL:0002546,3.72e-09,18;CL:0000115,4.35e-09,36;CL:0002078,1.55e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.51e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.40e-13!79;UBERON:0007798!7.40e-13!79;UBERON:0000468!1.14e-12!659;UBERON:0000055!1.95e-12!69;UBERON:0000480!2.42e-12!626;UBERON:0000467!2.68e-12!625;UBERON:0001009!2.29e-11!113;UBERON:0004872!3.37e-11!84;UBERON:0004535!1.43e-10!110;UBERON:0000926!1.06e-09!448;UBERON:0004120!1.06e-09!448;UBERON:0006603!1.06e-09!448;UBERON:0001981!1.38e-09!60;UBERON:0007500!1.38e-09!60;UBERON:0004537!1.38e-09!60;UBERON:0006965!1.38e-09!60;UBERON:0003914!3.81e-08!118;UBERON:0001986!4.30e-08!18;UBERON:0004638!4.30e-08!18;UBERON:0004852!4.30e-08!18;UBERON:0000490!1.75e-07!138;UBERON:0006914!4.18e-07!25;UBERON:0000487!7.17e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.51e-09;18!UBERON:0001986;3.51e-09;18!UBERON:0004852;3.51e-09;18!UBERON:0000947;6.15e-09;21!UBERON:0010191;6.15e-09;21!UBERON:0006914;8.90e-09;25!UBERON:0000487;5.31e-08;22!UBERON:0000055;3.76e-07;65!UBERON:0007500;5.40e-07;56!UBERON:0001981;5.40e-07;56!UBERON:0004537;5.40e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.10e-13,112;UBERON:0002049,6.01e-13,78;UBERON:0007798,6.01e-13,78;UBERON:0004872,6.71e-13,83;UBERON:0000055,1.34e-12,68;UBERON:0004535,1.42e-12,109;UBERON:0007500,1.99e-10,59;UBERON:0001981,1.99e-10,59;UBERON:0004537,1.99e-10,59;UBERON:0006965,1.99e-10,59;UBERON:0004638,3.72e-09,18;UBERON:0001986,3.72e-09,18;UBERON:0004852,3.72e-09,18;UBERON:0003914,9.91e-09,117;UBERON:0000947,1.04e-08,21;UBERON:0010191,1.04e-08,21;UBERON:0006914,1.08e-08,25;UBERON:0000487,4.37e-08,22 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.563817616383885,2.00146596706261,0.893922188854576,0.872338524100369,2.53299878168311,0,0.261185628199839,0.245733936501509,0,1.52908960491121,0.791300934685361,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,0.612002073732759,0,0.572471974262113,0.958120975510189,1.12988375635323,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.647787332037959,0.77272670290256,0.581592955118259,0.377875943688809,1.69808842831471,0.697287110717054,0.411167888021826,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.188242339542605,0.545812300115692,0.898893937780338,0.306083892370903,0.641858054152187,0.639337125799041,0.659702600373432,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0,0.209658645508376,0.336985893439485,0,0.64290234678832,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.79007586580942,1.0843174571537,1.00267582127178,0.434539556882471,2.3858578411533,1.94653948121054,0.283604451492204,0.665188192387692,0.614843499851882,0.851363990735132,0,0,0,0,0,0,0,0,1.39133685156694,0.860234595106124,2.77712401286075,3.39184765154406,0.419499436209906,0.825354125820202,1.04497483268405,1.55050055501597,3.20189636418039,4.68608857870538,2.01414658554573,1.52054421143703,2.19655851793353,1.10298924103761,3.24056779152704,1.42879565254528,1.34717623575702,0.675668882899933,3.06633274931766,1.89853131913626,0.732806975721629,2.63560834872127,3.87780264148325,0,1.98788780678127,1.13967460498122,2.64818361626438,4.30254931123221,2.12801029319014,0,0,0.74000264525148,1.55605517699883,1.61652806483626,2.28846664358842,1.05950199351452,0,0.937285727335186,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.842704840213491,0.408308342509787,0.982674538494144,1.03325781175765,0,0.741800787835671,0.910161361938026,1.43723628363248,0.505008341862199,0.625592599359821,1.10825646193673,0.877955241761676,0.612975591598039,2.10333282469236,0.340296549480063,1.4351170855109,1.70845911054854,0.423863802319124,0.600182192168805,0.618315175430633,3.09168648054755,0.744467425326359,1.35021065793013,1.26668106709558,1.7670364197088,0.920498986422993,1.61646056818812,1.06502877754984,1.0075209822764,0.67824236924195,0.57978255948989,1.36373060295417,0,0,0.397589304964456,0.116193942869518,0,0.252320850875628,0,3.12899064659632,0.643240938192885,0,1.39310378409594,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.686271241194102,0.109750285408626,1.1240175325762,0.100528972411631,0.277765335475589,0.651616610620649,0,0,0.231860809950154,1.52631302506568,2.30986316417718,0.925971025153221,0.951270761172991,0,0,0,0.468008530278475,0.445893486866185,0,1.00789276919316,0.283550194484773,1.52249488594842,0,0.383382679165211,0,0.352193736052904,0.414656231081544,0.432359860250884,0.37872730027914,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.560655421726804,0,0.07333828582095,1.03417372606222,0,0,1.06375246633948,0,0,0,0.266422179016099,1.71573592389777,0,0.823240336780769,0.977208552881205,0.710783897485092,0,0.602878754119172,0,0.699810938274399,0,0,0,0.718874566474748,0,0,0.579125226670317,0.410952645100767,0.895304816199478,0,0,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0.335032530668698,0,0,0,3.31532410748828,0.858840442033979,0.500170521059677,1.35632511849868,1.03985430765404,1.07057393278297,0.630809660135739,0.937131319941706,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.521301686808497,0.587403472388222,0.343143423810856,0,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,3.22270143904931,0.561320188866147,0.896974044789907,2.55853624533352,0.804269605718038,0,0.771048469013278,0.710246901252508,0.328508624055237,0.519254429183621,0.348631135379878,0.241718899183244,0.601519410909855,0.368323955743585,0.918515585316854,0.728364672026868,1.57349297951309,1.35359883872224,0.539107359730903,0,0,0.422206515571503,1.13733384070897,0.850468526382578,0.215915916102139,1.54227252690289,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.976135183992909,0.618246069886334,0.366277859273374,0.165018999841176,0,0.650060246036521,1.6068392984416,0.096670718292122,0.462145851343933,0.15350367472613,0.275673144969061,0.429680979473094,0.725083469571143,0.340906509664404,0.356128142586949,0.661139661443912,0.576570202095319,1.78657797492418,1.416208931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| ||
|short_description=p5@FNDC3B | |||
}} | }} |
Latest revision as of 17:54, 16 September 2015
Short description: | p5@FNDC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FNDC3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000423424_5end |
EntrezGene: | FNDC3B |
HGNC: | 24670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.06e-11 | 24 |
blood vessel endothelial cell | 3.72e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.72e-09 | 18 |
endothelial cell | 4.35e-09 | 36 |
meso-epithelial cell | 1.55e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.10e-13 | 112 |
vasculature | 6.01e-13 | 78 |
vascular system | 6.01e-13 | 78 |
splanchnic layer of lateral plate mesoderm | 6.71e-13 | 83 |
vessel | 1.34e-12 | 68 |
cardiovascular system | 1.42e-12 | 109 |
epithelial tube open at both ends | 1.99e-10 | 59 |
blood vessel | 1.99e-10 | 59 |
blood vasculature | 1.99e-10 | 59 |
vascular cord | 1.99e-10 | 59 |
blood vessel endothelium | 3.72e-09 | 18 |
endothelium | 3.72e-09 | 18 |
cardiovascular system endothelium | 3.72e-09 | 18 |
epithelial tube | 9.91e-09 | 117 |
aorta | 1.04e-08 | 21 |
aortic system | 1.04e-08 | 21 |
squamous epithelium | 1.08e-08 | 25 |
simple squamous epithelium | 4.37e-08 | 22 |