FFCP PHASE1:Hg19::chr3:48520846..48520874,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:48520846..48520874,-
|short_description=p12@SHISA5
|description=CAGE_peak_12_at_SHISA5_5end
|association_with_transcript=93bp_to_ENST00000486344,uc011bbl.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000486344,uc011bbl.1_5end | |||
|cluster_id=chr3:48520846..48520874,- | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_12_at_SHISA5_5end | |||
|id=chr3:48520846..48520874,- | |||
|ontology_enrichment_celltype=CL:0000838!3.22e-46!52;CL:0000542!3.89e-45!53;CL:0000051!3.89e-45!53;CL:0000791!3.94e-39!18;CL:0000789!3.94e-39!18;CL:0002420!3.94e-39!18;CL:0002419!3.94e-39!18;CL:0000790!3.94e-39!18;CL:0000084!6.31e-33!25;CL:0000827!6.31e-33!25;CL:0002087!3.38e-26!119;CL:0000625!1.41e-24!11;CL:0000738!5.40e-24!140;CL:0002031!8.38e-22!124;CL:0000037!4.27e-17!172;CL:0000566!4.27e-17!172;CL:0000988!1.86e-15!182;CL:0002032!2.51e-15!165;CL:0000837!2.51e-15!165;CL:0000624!2.14e-14!6;CL:0000945!1.42e-11!24;CL:0000826!1.42e-11!24;CL:0000898!5.45e-08!3;CL:0000623!2.20e-07!3;CL:0000825!2.20e-07!3;CL:0000842!2.51e-07!3;CL:0000817!5.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.81e-59;18!CL:0000789;1.81e-59;18!CL:0002419;1.81e-59;18!CL:0000625;1.82e-43;11!CL:0000084;6.72e-42;25!CL:0000624;2.94e-21;6!CL:0000542;5.45e-16;53!CL:0000898;6.24e-08;3!CL:0000623;2.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.27e-59,18;CL:0000789,1.27e-59,18;CL:0002420,1.27e-59,18;CL:0002419,1.27e-59,18;CL:0000790,1.27e-59,18;CL:0000625,1.24e-43,11;CL:0000084,5.23e-42,25;CL:0000827,5.23e-42,25;CL:0000838,2.98e-30,52;CL:0000542,1.34e-29,53;CL:0000051,1.34e-29,53;CL:0000624,2.95e-21,6;CL:0002087,1.28e-12,115;CL:0002031,1.33e-10,120;CL:0000738,5.06e-10,136;CL:0000898,6.80e-08,3;CL:0000037,2.50e-07,168;CL:0000623,3.04e-07,3;CL:0000825,3.04e-07,3;CL:0002032,6.53e-07,161;CL:0000837,6.53e-07,161;CL:0000988,9.44e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.81e-59;18!CL:0000051;5.45e-16;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.99e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.60e-19!15;UBERON:0000179!3.60e-19!15;UBERON:0000463!3.60e-19!15;UBERON:0004177!3.47e-10!7;UBERON:0002370!9.29e-09!4;UBERON:0005058!9.29e-09!4;UBERON:0009113!9.29e-09!4;UBERON:0003295!9.29e-09!4;UBERON:0005562!9.29e-09!4;UBERON:0001042!3.70e-07!10;UBERON:0009145!3.70e-07!10;UBERON:0002390!4.84e-07!102;UBERON:0003061!4.84e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@SHISA5 | |||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p12@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SHISA5_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 93bp_to_ENST00000486344, uc011bbl.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.27e-59 | 18 |
alpha-beta T cell | 1.27e-59 | 18 |
immature T cell | 1.27e-59 | 18 |
mature T cell | 1.27e-59 | 18 |
immature alpha-beta T cell | 1.27e-59 | 18 |
CD8-positive, alpha-beta T cell | 1.24e-43 | 11 |
T cell | 5.23e-42 | 25 |
pro-T cell | 5.23e-42 | 25 |
lymphoid lineage restricted progenitor cell | 2.98e-30 | 52 |
lymphocyte | 1.34e-29 | 53 |
common lymphoid progenitor | 1.34e-29 | 53 |
CD4-positive, alpha-beta T cell | 2.95e-21 | 6 |
nongranular leukocyte | 1.28e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-10 | 120 |
leukocyte | 5.06e-10 | 136 |
naive T cell | 6.80e-08 | 3 |
hematopoietic stem cell | 2.50e-07 | 168 |
natural killer cell | 3.04e-07 | 3 |
pro-NK cell | 3.04e-07 | 3 |
hematopoietic oligopotent progenitor cell | 6.53e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.53e-07 | 161 |
hematopoietic cell | 9.44e-07 | 177 |