FFCP PHASE1:Hg19::chr4:101439101..101439106,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:101439101..101439106,-
|short_description=p7@EMCN
|description=CAGE_peak_7_at_EMCN_5end
|association_with_transcript=48bp_to_ENST00000502744_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000502744_5end | |||
|cluster_id=chr4:101439101..101439106,- | |||
|coexpression_cluster_id=C856 | |||
|description=CAGE_peak_7_at_EMCN_5end | |||
|id=chr4:101439101..101439106,- | |||
|ontology_enrichment_celltype=CL:0002139!6.53e-25!24;CL:0000115!1.79e-18!35;CL:0000071!2.88e-16!18;CL:0002546!2.88e-16!18;CL:0002078!3.20e-13!44;CL:0005020!1.10e-10!6;CL:0002138!1.10e-10!6;CL:0005022!1.10e-10!6;CL:1000413!9.16e-10!9;CL:0000213!1.08e-08!57;CL:0000215!1.08e-08!57;CL:0002544!9.84e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;8.58e-13;3!CL:0002139;2.67e-12;24!CL:0002138;1.24e-11;6!CL:0000115;4.43e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.31e-12,3;CL:0002139,2.98e-12,24;CL:0005020,1.35e-11,6;CL:0002138,1.35e-11,6;CL:0005022,1.35e-11,6;CL:0000115,2.37e-09,36;CL:0002078,4.26e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;1.24e-11;6!UBERON:0006603;2.46e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.29e-45!115;UBERON:0004111!4.03e-17!241;UBERON:0001986!2.88e-16!18;UBERON:0004638!2.88e-16!18;UBERON:0004852!2.88e-16!18;UBERON:0000477!7.06e-16!286;UBERON:0000025!7.33e-13!194;UBERON:0000487!1.64e-12!22;UBERON:0001049!2.27e-11!57;UBERON:0005068!2.27e-11!57;UBERON:0006241!2.27e-11!57;UBERON:0007135!2.27e-11!57;UBERON:0006914!1.66e-10!25;UBERON:0003915!9.16e-10!9;UBERON:0004700!9.16e-10!9;UBERON:0001917!9.16e-10!9;UBERON:0002616!9.21e-10!59;UBERON:0000055!1.94e-09!69;UBERON:0003075!7.58e-09!86;UBERON:0007284!7.58e-09!86;UBERON:0004872!1.15e-08!84;UBERON:0003080!3.17e-08!42;UBERON:0000468!3.31e-08!659;UBERON:0000467!4.23e-08!625;UBERON:0002346!4.24e-08!90;UBERON:0002049!4.62e-08!79;UBERON:0007798!4.62e-08!79;UBERON:0000480!4.88e-08!626;UBERON:0001009!5.21e-08!113;UBERON:0000955!5.37e-08!69;UBERON:0006238!5.37e-08!69;UBERON:0005743!8.66e-08!86;UBERON:0001017!8.87e-08!82;UBERON:0004535!9.82e-08!110;UBERON:0001473!1.02e-07!8;UBERON:0004536!1.02e-07!8;UBERON:0006558!1.02e-07!8;UBERON:0002465!1.10e-07!10;UBERON:0000483!1.27e-07!309;UBERON:0002780!2.10e-07!41;UBERON:0001890!2.10e-07!41;UBERON:0006240!2.10e-07!41;UBERON:0000119!2.18e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.66e-09;2!UBERON:0001473;1.01e-08;8!UBERON:0004536;1.01e-08;8!UBERON:0006558;1.01e-08;8!UBERON:0002066;7.68e-08;5!UBERON:0002465;5.72e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-17,114;UBERON:0000341,3.20e-09,2;UBERON:0001473,1.08e-08,8;UBERON:0004536,1.08e-08,8;UBERON:0006558,1.08e-08,8;UBERON:0002066,9.83e-08,5;UBERON:0003103,2.97e-07,68;UBERON:0002465,6.00e-07,10 | |||
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| ||
|short_description=p7@EMCN | |||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p7@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EMCN_5end |
Coexpression cluster: | C856_Endothelial_lung_diaphragm_left_kidney_heart_Hepatic |
Association with transcript: | 48bp_to_ENST00000502744_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.31e-12 | 3 |
endothelial cell of vascular tree | 2.98e-12 | 24 |
lymphangioblast | 1.35e-11 | 6 |
endothelial cell of lymphatic vessel | 1.35e-11 | 6 |
vascular lymphangioblast | 1.35e-11 | 6 |
endothelial cell | 2.37e-09 | 36 |
meso-epithelial cell | 4.26e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.25e-17 | 114 |
throat | 3.20e-09 | 2 |
lymphatic vessel | 1.08e-08 | 8 |
lymph vasculature | 1.08e-08 | 8 |
lymphatic part of lymphoid system | 1.08e-08 | 8 |
umbilical vein | 9.83e-08 | 5 |
compound organ | 2.97e-07 | 68 |
lymphoid system | 6.00e-07 | 10 |