FFCP PHASE1:Hg19::chr4:175184004..175184014,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:175184004..175184014,-
|short_description=p16@FBXO8
|description=CAGE_peak_16_at_FBXO8_5end
|association_with_transcript=228bp_to_CU677091,HQ447833_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26269 | |EntrezGene=26269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13587 | |HGNC=13587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_CU677091,HQ447833_5end | |||
|cluster_id=chr4:175184004..175184014,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_16_at_FBXO8_5end | |||
|id=chr4:175184004..175184014,- | |||
|ontology_enrichment_celltype=CL:0000313!8.62e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.84e-34;1!CL:0000333;4.06e-27;5!CL:0000159;5.48e-18;2!CL:1000415;7.05e-18;2!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0002321;9.24e-10;15!CL:0002559;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:1000415,6.48e-18,2;CL:0000346,3.24e-12,3;CL:1000428,3.24e-12,3;CL:0002559,7.49e-08,5;CL:0000333,1.31e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!6.77e-16!6;DOID:2152!8.62e-12!1;DOID:171!9.28e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-34;1!DOID:169;8.47e-23;6!DOID:171;3.97e-14;10!DOID:3095;5.91e-07;22!DOID:2994;5.91e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:169,7.58e-23,6;DOID:171,3.71e-14,10;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.97e-19!5;UBERON:0002410!5.97e-19!5;UBERON:0004911!8.62e-12!1;UBERON:0002171!2.18e-11!1;UBERON:0006518!2.18e-11!1;UBERON:0008949!2.18e-11!1;UBERON:0000101!2.18e-11!1;UBERON:0002167!2.18e-11!1;UBERON:0003112!4.01e-11!1;UBERON:0000032!4.01e-11!1;UBERON:0005253!4.01e-11!1;UBERON:0003128!4.01e-11!1;UBERON:0002241!4.01e-11!1;UBERON:0001703!4.01e-11!1;UBERON:0004761!4.01e-11!1;UBERON:0009617!4.01e-11!1;UBERON:0002038!4.44e-11!1;UBERON:0009661!4.44e-11!1;UBERON:0000010!8.72e-11!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.84e-34;1!UBERON:0000013;4.06e-27;5!UBERON:0002410;4.06e-27;5!UBERON:0004909;5.48e-18;2!UBERON:0000010;1.41e-15;8!UBERON:0002110;2.19e-12;3!UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0002073;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.84e-34,1;UBERON:0000013,3.55e-27,5;UBERON:0002410,3.55e-27,5;UBERON:0004909,5.48e-18,2;UBERON:0000010,1.31e-15,8;UBERON:0002110,2.07e-12,3;UBERON:0006242,2.07e-12,3;UBERON:0000412,3.24e-12,3;UBERON:0001992,3.24e-12,3;UBERON:0002073,7.49e-08,5;UBERON:0005086,7.49e-08,5 | |||
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|short_description=p16@FBXO8 | |||
}} | }} |
Latest revision as of 20:05, 16 September 2015
Short description: | p16@FBXO8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FBXO8_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 228bp_to_CU677091, HQ447833_5end |
EntrezGene: | FBXO8 |
HGNC: | 13587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
epithelial cell of gall bladder | 6.48e-18 | 2 |
hair follicle dermal papilla cell | 3.24e-12 | 3 |
stem cell of epidermis | 3.24e-12 | 3 |
hair follicle cell | 7.49e-08 | 5 |
migratory neural crest cell | 1.31e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.84e-34 | 1 |
sympathetic nervous system | 3.55e-27 | 5 |
autonomic nervous system | 3.55e-27 | 5 |
epithelium of gonad | 5.48e-18 | 2 |
peripheral nervous system | 1.31e-15 | 8 |
gallbladder | 2.07e-12 | 3 |
gall bladder primordium | 2.07e-12 | 3 |
dermal papilla | 3.24e-12 | 3 |
papillary layer of dermis | 3.24e-12 | 3 |
hair follicle | 7.49e-08 | 5 |
hair follicle placode | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-34 | 1 |
neuroendocrine tumor | 7.58e-23 | 6 |
neuroectodermal tumor | 3.71e-14 | 10 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |