FFCP PHASE1:Hg19::chr5:14440848..14440864,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:14440848..14440864,+
|short_description=p22@TRIO
|description=CAGE_peak_22_at_TRIO_5end
|association_with_transcript=-63bp_to_ENST00000515710,uc003jfi.1_5e...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000515710,uc003jfi.1_5end | |||
|cluster_id=chr5:14440848..14440864,+ | |||
|coexpression_cluster_id=C950 | |||
|description=CAGE_peak_22_at_TRIO_5end | |||
|id=chr5:14440848..14440864,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.55e-19!180;CL:0000183!2.45e-16!59;CL:0000680!1.01e-14!57;CL:0000056!1.01e-14!57;CL:0000355!1.01e-14!57;CL:0000187!2.97e-13!54;CL:0000057!1.07e-11!75;CL:0000393!3.67e-11!60;CL:0000211!3.67e-11!60;CL:0000188!3.74e-10!9;CL:0002620!5.41e-10!23;CL:0000048!7.79e-08!430;CL:0000723!1.97e-07!436;CL:0000192!2.53e-07!42;CL:0000514!2.53e-07!42;CL:0000034!6.46e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002582;2.46e-22;3!CL:0002549;3.36e-15;2!CL:0002583;7.83e-15;2!CL:0002334;1.15e-14;12!CL:0000708;1.47e-10;3!CL:0000569;7.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,2.65e-22,3;CL:0002549,2.36e-15,2;CL:0002583,8.41e-15,2;CL:0002334,1.22e-14,12;CL:0000708,1.78e-10,3;CL:0000569,7.18e-08,4;CL:0000011,7.18e-08,4;CL:0000057,1.28e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000011;7.43e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.43e-16!70;UBERON:0001134!1.79e-14!61;UBERON:0002036!1.79e-14!61;UBERON:0003082!1.79e-14!61;UBERON:0002385!9.80e-14!63;UBERON:0001015!9.80e-14!63;UBERON:0000383!9.80e-14!63;UBERON:0000486!2.47e-13!82;UBERON:0000914!4.63e-13!83;UBERON:0002329!4.63e-13!83;UBERON:0003077!4.63e-13!83;UBERON:0003059!4.63e-13!83;UBERON:0007282!4.63e-13!83;UBERON:0009618!4.63e-13!83;UBERON:0007285!4.63e-13!83;UBERON:0005256!2.18e-08!143;UBERON:0000475!6.26e-07!365;UBERON:0002199!9.90e-07!45;UBERON:0002416!9.90e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.36e-15;2!UBERON:0005358;3.36e-15;2!UBERON:0001886;3.36e-15;2!UBERON:0004086;3.36e-15;2!UBERON:0005282;3.36e-15;2!UBERON:0005281;3.36e-15;2!UBERON:0005284;3.72e-13;5!UBERON:0003210;1.47e-10;3!UBERON:0002119;1.12e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.36e-15,2;UBERON:0005358,2.36e-15,2;UBERON:0001886,2.36e-15,2;UBERON:0004086,2.36e-15,2;UBERON:0005282,2.36e-15,2;UBERON:0005281,2.36e-15,2;UBERON:0005284,3.43e-13,5;UBERON:0003210,1.78e-10,3;UBERON:0002119,1.24e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,2.19093027116212,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,2.57307626996383,2.30470369792,0,0,0,0.298897361103602,0.469737994575059,0.647491777472526,0.842704840213491,0,0,0,0,0,3.64064544775211,0,0,0.750711119231785,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.900273288253207,0,0,0.37223371266318,0.337552664482532,0,1.51460264546469,0.0920498986422993,0.323292113637624,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13049060256185,0.43596006883328,3.15354629030085,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,2.15893571323718,1.42049380250502,3.12083192852475,4.15403543346897,2.20799719073923,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0.616194468458578,0.307007349452259,1.65403886981437,0.322260734604821,0.145016693914229,1.44885266607372,0.178064071293475,0,0,0,0,0,0.94443704049192,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0,1.2655176988749,0.190630193923825,0,0,1.90921948755562,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.451961481561065,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,8.34901306748566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94031243752936,0,0.554805861502613,0,0.754703705257725,0,0,1.36107831386915,2.48699520932449,0.887130899937803,0.159296767163702,0,1.39736661188633,1.24411862352257,0,0,0,0,0.406870733204662,2.54588122883583,0.214821114084977,0.928067519756987,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,2.16313281061895,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0,0.404234377916439,0,0.684466602170562,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,2.19093027116212,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,2.57307626996383,2.30470369792,0,0,0,0.298897361103602,0.469737994575059,0.647491777472526,0.842704840213491,0,0,0,0,0,3.64064544775211,0,0,0.750711119231785,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.900273288253207,0,0,0.37223371266318,0.337552664482532,0,1.51460264546469,0.0920498986422993,0.323292113637624,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13049060256185,0.43596006883328,3.15354629030085,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,2.15893571323718,1.42049380250502,3.12083192852475,4.15403543346897,2.20799719073923,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0.616194468458578,0.307007349452259,1.65403886981437,0.322260734604821,0.145016693914229,1.44885266607372,0.178064071293475,0,0,0,0,0,0.94443704049192,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0,1.2655176988749,0.190630193923825,0,0,1.90921948755562,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.451961481561065,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,8.34901306748566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94031243752936,0,0.554805861502613,0,0.754703705257725,0,0,1.36107831386915,2.48699520932449,0.887130899937803,0.159296767163702,0,1.39736661188633,1.24411862352257,0,0,0,0,0.406870733204662,2.54588122883583,0.214821114084977,0.928067519756987,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,2.16313281061895,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0,0.404234377916439,0,0.684466602170562,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p22@TRIO | |||
}} | }} |
Latest revision as of 19:16, 15 September 2015
Short description: | p22@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | -63bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 2.65e-22 | 3 |
fibroblast of choroid plexus | 2.36e-15 | 2 |
subcutaneous preadipocyte | 8.41e-15 | 2 |
preadipocyte | 1.22e-14 | 12 |
leptomeningeal cell | 1.78e-10 | 3 |
cardiac mesenchymal cell | 7.18e-08 | 4 |
migratory trunk neural crest cell | 7.18e-08 | 4 |
fibroblast | 1.28e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.36e-15 | 2 |
ventricle of nervous system | 2.36e-15 | 2 |
choroid plexus | 2.36e-15 | 2 |
brain ventricle | 2.36e-15 | 2 |
ventricular system of brain | 2.36e-15 | 2 |
ventricular system of central nervous system | 2.36e-15 | 2 |
brain vasculature | 3.43e-13 | 5 |
blood-cerebrospinal fluid barrier | 1.78e-10 | 3 |
left ovary | 1.24e-07 | 4 |