FFCP PHASE1:Hg19::chr5:83016760..83016771,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:83016760..83016771,-
|short_description=p4@HAPLN1
|description=CAGE_peak_4_at_HAPLN1_5end
|association_with_transcript=124bp_to_NM_001884,uc003kin.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1404 | |EntrezGene=1404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |HGNC=2380 | ||
|TSSclassifier=strong | |||
|UniProt=P10915 | |UniProt=P10915 | ||
|association_with_transcript=124bp_to_NM_001884,uc003kin.2_5end | |||
|cluster_id=chr5:83016760..83016771,- | |||
|coexpression_cluster_id=C4525 | |||
|description=CAGE_peak_4_at_HAPLN1_5end | |||
|id=chr5:83016760..83016771,- | |||
|ontology_enrichment_celltype=CL:0000055!2.76e-34!180;CL:0000057!1.29e-17!75;CL:0002620!8.03e-12!23;CL:0000062!1.79e-11!11;CL:0000375!1.79e-11!11;CL:0000335!1.79e-11!11;CL:0000359!8.49e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.27e-20;9!CL:0002620;1.47e-15;23!CL:0002573;9.81e-10;2!CL:0000057;1.66e-08;73!CL:0000138;5.60e-08;6!CL:0000153;1.05e-07;9!CL:0000447;1.05e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.59e-21,11;CL:0000375,5.59e-21,11;CL:0000335,5.59e-21,11;CL:0000057,9.64e-17,76;CL:0002620,1.82e-15,23;CL:0002573,9.82e-10,2;CL:0000058,4.41e-08,6;CL:0000138,4.41e-08,6;CL:0000153,8.46e-08,9;CL:0000447,8.46e-08,9;CL:0000034,3.18e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000335;5.84e-21;11 | |||
|ontology_enrichment_disease=DOID:17!1.22e-08!5;DOID:450!1.22e-08!5;DOID:66!1.22e-08!5;DOID:423!1.22e-08!5;DOID:0080000!1.22e-08!5;DOID:11722!1.22e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.92e-15;5!DOID:450;5.92e-15;5!DOID:66;5.92e-15;5!DOID:423;5.92e-15;5!DOID:0080000;5.92e-15;5!DOID:11722;5.92e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.26e-15,5;DOID:450,7.26e-15,5;DOID:66,7.26e-15,5;DOID:423,7.26e-15,5;DOID:0080000,7.26e-15,5;DOID:11722,7.26e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!7.40e-10!84;UBERON:0002049!3.45e-08!79;UBERON:0007798!3.45e-08!79;UBERON:0001981!6.25e-08!60;UBERON:0007500!6.25e-08!60;UBERON:0004537!6.25e-08!60;UBERON:0006965!6.25e-08!60;UBERON:0004535!1.43e-07!110;UBERON:0001637!2.93e-07!42;UBERON:0003509!2.93e-07!42;UBERON:0004572!2.93e-07!42;UBERON:0001009!3.93e-07!113;UBERON:0002097!6.17e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.90e-10;41!UBERON:0002199;1.45e-07;46!UBERON:0002416;1.45e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.64e-12,41;UBERON:0002199,1.88e-10,46;UBERON:0002416,1.88e-10,46 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.61560529038394,0.204000691244253,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32442660793179,2.89151321907653,0.50133791063589,6.80778639115871,1.5905718941022,18.9787599418028,1.13441780596881,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,3.29239330327907,0.264818361626438,0,0,6.16745360156538,1.06748995729705,15.5400555502811,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0,0,1.31693286264251,8.27517048657353,0.600952235626387,0.567160915800105,13.9923915837312,4.27114777637135,2.11931901159562,6.30191301777245,3.7098910525838,7.72921620136887,2.97786970130544,1.0126579934476,3.02054715999716,3.28163906517349,4.87864462804187,0,2.13005755509969,0.604512589365842,0.847802961552438,0,0,0,0.121973706129595,0.132529768321485,2.20768491452085,1.0366105501537,2.77552935963191,0,0,3.21620469096443,0,2.3218396401599,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.904902010304444,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,5.11608369537122,6.82222512167955,1.03473071292505,14.6129631677796,4.79359838208428,0,0,0,0,0,0,0,0,0.604780586659361,0.496215615637554,10.4354141835882,2.24528075546459,0,2.55853624533352,0.965123526861645,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,19.5042960063071,22.3600744784793,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,2.83331112147576,0.6970372701606,0.616067160352178,0,0,3.15051172476664,0.858749320451947,0,0,0.190630193923825,0,0,0,0,0,0,0,0,11.0957224821106,0,0,0.243713489631284,0,0,0,0,0,7.29782872765342,5.69986150829892,0,0,0,6.196469961995,0.281695602532241,1.14729081763241,2.16147890228867,0,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32979812218605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.941425616810999,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.687481272035051,2.87149209830726,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0,0,0,0.147855149989634,0,0,0,0.829412415681711,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,3.70435958918134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,2.22603045457393,0,0,2.1160556621441,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,4.57658514560601,0,3.97832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05993644355867,0,0,0,0.333694205676207,0.313972371402056,0,0,0,0,0,0,0,7.09072694745564,0,0,0,0,0,0,6.98158804310336,11.0777426186905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,6.79708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,1.84870251452567,0,0,0,0.506794004045748,0,1.06886962106224,0,0,0,0,0,0,0.639701945702943,0.714193294391221,0,0,0.448527450322454,0,0.202117188958219,0,0.342233301085281,0,0.215166616178029,3.99192427855216,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p4@HAPLN1 | |||
}} | }} |
Latest revision as of 01:10, 19 September 2015
Short description: | p4@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HAPLN1_5end |
Coexpression cluster: | C4525_Fibroblast_Saos2_Chondrocyte_Preadipocyte_Osteoblast_trachea_pleomorphic |
Association with transcript: | 124bp_to_NM_001884, uc003kin.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | P10915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.59e-21 | 11 |
osteoprogenitor cell | 5.59e-21 | 11 |
mesenchyme condensation cell | 5.59e-21 | 11 |
fibroblast | 9.64e-17 | 76 |
skin fibroblast | 1.82e-15 | 23 |
Schwann cell | 9.82e-10 | 2 |
chondroblast | 4.41e-08 | 6 |
chondrocyte | 4.41e-08 | 6 |
GAG secreting cell | 8.46e-08 | 9 |
carbohydrate secreting cell | 8.46e-08 | 9 |
stem cell | 3.18e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.64e-12 | 41 |
integument | 1.88e-10 | 46 |
integumental system | 1.88e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.26e-15 | 5 |
myotonic disease | 7.26e-15 | 5 |
muscle tissue disease | 7.26e-15 | 5 |
myopathy | 7.26e-15 | 5 |
muscular disease | 7.26e-15 | 5 |
myotonic dystrophy | 7.26e-15 | 5 |