FFCP PHASE1:Hg19::chr6:105405976..105405987,+: Difference between revisions
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|id=chr6:105405976..105405987,+
|short_description=p9@LIN28B
|description=CAGE_peak_9_at_LIN28B_5end
|association_with_transcript=2bp_to_uc010kda.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389421 | |EntrezGene=389421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32207 | |HGNC=32207 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc010kda.1_5end | |||
|cluster_id=chr6:105405976..105405987,+ | |||
|coexpression_cluster_id=C4539 | |||
|description=CAGE_peak_9_at_LIN28B_5end | |||
|id=chr6:105405976..105405987,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.00e-21!5;CL:0000540!5.96e-07!6;CL:0000031!5.96e-07!6;CL:0000404!5.96e-07!6;CL:0000133!6.80e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.06e-49;5!CL:0002321;1.37e-16;15!CL:0000540;1.27e-15;6!CL:0000404;1.27e-15;6!CL:0000148;2.14e-09;10!CL:0000182;4.75e-08;12!CL:0000147;7.50e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.47e-50,5;CL:0000540,1.30e-15,6;CL:0000031,1.30e-15,6;CL:0000404,1.30e-15,6;CL:0000047,7.42e-12,8;CL:0000148,1.83e-09,10;CL:0000541,1.83e-09,10;CL:0000182,5.56e-08,12;CL:0000147,6.70e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000031;1.27e-15;6!UBERON:0004161;9.75e-09;11!UBERON:0009497;1.81e-07;13 | |||
|ontology_enrichment_disease=DOID:14566!3.71e-10!239;DOID:162!1.11e-09!235;DOID:8692!5.62e-09!31;DOID:74!9.20e-09!2;DOID:1036!1.87e-08!8;DOID:3095!4.74e-08!22;DOID:2994!4.74e-08!22;DOID:1240!8.24e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@LIN28B | |||
}} | }} |
Latest revision as of 13:56, 19 September 2015
Short description: | p9@LIN28B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LIN28B_5end |
Coexpression cluster: | C4539_H9_chronic_testicular_HES3GFP_iPS_embryonic_anaplastic |
Association with transcript: | 2bp_to_uc010kda.1_5end |
EntrezGene: | LIN28B |
HGNC: | 32207 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.47e-50 | 5 |
neuron | 1.30e-15 | 6 |
neuroblast | 1.30e-15 | 6 |
electrically signaling cell | 1.30e-15 | 6 |
neuronal stem cell | 7.42e-12 | 8 |
melanocyte | 1.83e-09 | 10 |
melanoblast | 1.83e-09 | 10 |
hepatocyte | 5.56e-08 | 12 |
pigment cell | 6.70e-07 | 14 |