NonredundantMotifs:190: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=
|motif_cluster_2013_march_motif_members= /SWISSREGULON:AIRE.p2
|name=known190
|representative_motif_db=SWISSREGULON
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{{Known_motif | {{Known_motif | ||
|entrez_gene_id= | |PWM=PO;A;C;G;T!1;5.614437;10.093608;45.801662;11.446177!2;28.820237;7.40368;29.032744;7.699223!3;6.355252;2.660841;16.424949;47.514842!4;6.665938;4.893482;4.398634;56.99783!5;46.9241;5.594739;4.803222;15.633823!6;0.676141;2.029946;4.773762;65.476035!7;11.072103;0.518439;2.287596;59.077746!8;39.712506;0.819879;16.839537;15.583962!9;53.578608;3.348832;1.036813;14.991631!10;9.947869;0;13.607422;49.400593!11;10.117501;0.477778;1.029747;61.330858!12;3.061658;0;65.401955;4.492271!13;3.601487;1.929929;59.375507;8.048961!14;11.142762;1.933376;8.555628;51.324118!15;16.014959;0.409353;2.899264;53.632308!16;44.665407;1.153007;15.656313;11.481157!17;4.37178;2.424435;4.599827;61.559842!18;50.367439;5.939991;9.855122;6.793332!19;1.293342;4.676801;0.968548;66.017193!20;0.947416;0.843009;2.446755;68.7187039999999!21;3.526923;6.706;47.655218;15.067743!22;12.976002;5.307243;47.188318;7.484321!23;4.526218;9.658324;16.762432;42.00891!24;2.280014;4.4096;5.559723;60.706547!25;36.077052;1.833139;15.782627;19.263066 | ||
|entrez_gene_id=326 | |||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:AIRE.p2 | |motif_cluster_2013_march_motif_members= /SWISSREGULON:AIRE.p2 | ||
|name= | |name=non-redundant190 | ||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
|representative_motif_id=AIRE.p2 | |representative_motif_id=AIRE.p2 | ||
|representative_motif_name= | |representative_motif_name=AIRE | ||
|score=0.10788039600041363 | |score=0.10788039600041363 | ||
|uniprot_entry_name= | |uniprot_entry_name=AIRE | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 15:57, 31 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant190
- db :SWISSREGULON
- Id :AIRE.p2
- name :AIRE
- score :0.10788039600041363
- External refs:
- Internal refs:
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Sub Motif Members
